Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0024895g0040 Nicotiana tabacum HOM05D002864 ORTHO05D008485 7.3e-40 166.8 84 100.0
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 2.4e-19 98.6 55 87.3
CAN.G366.9 Capsicum annuum HOM05D002864 ORTHO05D008485 9.2e-19 96.7 55 85.5
CAN.G537.1 Capsicum annuum HOM05D002864 ORTHO05D008485 9.2e-19 96.7 55 85.5
CAN.G539.3 Capsicum annuum HOM05D002864 ORTHO05D008485 9.2e-19 96.7 55 85.5
CAN.G761.1 Capsicum annuum HOM05D002864 ORTHO05D008485 9.2e-19 96.7 55 85.5
HanXRQChr04g0101201 Helianthus annuus HOM05D002864 ORTHO05D008485 2.7e-18 95.1 55 83.6
HanXRQChr13g0393901 Helianthus annuus HOM05D002864 ORTHO05D008485 2.7e-18 95.1 55 83.6
HanXRQMTg0579191 Helianthus annuus HOM05D002864 ORTHO05D008485 2.7e-18 95.1 55 83.6
Lj2A1230T121 Lonicera japonica HOM05D002864 ORTHO05D008485 6.0e-18 94.0 76 68.4
Lj2P1221T99 Lonicera japonica HOM05D002864 ORTHO05D008485 6.0e-18 94.0 76 68.4
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 1.7e-17 92.4 76 65.8
Lsat_1_v5_gn_4_66001 Lactuca sativa HOM05D002864 ORTHO05D008485 2.3e-17 92.0 55 80.0
Lsat_1_v5_gn_7_25860 Lactuca sativa HOM05D002864 ORTHO05D008485 2.3e-17 92.0 55 80.0
Lsat_1_v5_gn_7_96661 Lactuca sativa HOM05D002864 ORTHO05D008485 2.3e-17 92.0 55 80.0
SalBow1G5070 Salvia bowleyana HOM05D002864 ORTHO05D008485 2.3e-17 92.0 76 63.2
CSS0047546 Camellia sinensis var. sinensis HOM05D002864 ORTHO05D008485 3.0e-17 91.7 76 67.1
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.5e-16 89.4 55 83.6
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 1.9e-16 89.0 53 84.9
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 9.5e-16 86.7 55 81.8
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 9.5e-16 86.7 55 81.8
Nitab4.5_0004300g0150 Nicotiana tabacum HOM05D002864 ORTHO05D008485 1.6e-15 85.9 48 87.5
arahy.Tifrunner.gnm1.ann1.I2EFRY Arachis hypogaea HOM05D002864 ORTHO05D008485 3.6e-15 84.7 76 64.5
arahy.Tifrunner.gnm1.ann1.ID22MY Arachis hypogaea HOM05D002864 ORTHO05D008485 3.6e-15 84.7 76 64.5
arahy.Tifrunner.gnm1.ann1.3LP0N0 Arachis hypogaea HOM05D002864 ORTHO05D008485 8.1e-15 83.6 53 83.0
AT2G07725 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
ATMG00210 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
A04p09410 Brassica napus HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
BolSC28t60317H Brassica oleracea HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
BolSC28t60372H Brassica oleracea HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
BraSC159t45731Z Brassica rapa HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
BraSC48t46241Z Brassica rapa HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
BraSC48t46332Z Brassica rapa HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
BraSC54t46369Z Brassica rapa HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
CANSAT16G0032 Cannabis sativa HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
CARHR282720 Cardamine hirsuta HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
LjContig00315g0018050 Lotus japonicus HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
LjContig00439g0002067 Lotus japonicus HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
LjContig00446g0004288 Lotus japonicus HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 81.1
Nn1g09937 Nelumbo nucifera HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 77.4
Nn1g10176 Nelumbo nucifera HOM05D002864 ORTHO05D008485 1.4e-14 82.8 53 77.4
Lalb_Chr00c21g0405111 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Lalb_Chr00c21g0405201 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Lalb_Chr00c21g0405251 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Lalb_Chr00c21g0405391 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Lalb_Chr00c24g0407171 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Lalb_Chr07g0190471 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Lalb_Chr11g0070141 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Lalb_Chr11g0070221 Lupinus albus HOM05D002864 ORTHO05D008485 2.4e-14 82.0 53 81.1
Sed0011141 Sechium edule HOM05D002864 ORTHO05D008485 4.0e-14 81.3 53 81.1
Sed0025017 Sechium edule HOM05D002864 ORTHO05D008485 4.0e-14 81.3 53 81.1
SGA_v2.0_scaffold420G51305 Striga asiatica HOM05D002864 ORTHO05D008485 4.0e-14 81.3 84 56.0
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 5.2e-14 80.9 53 79.2
Lsat_1_v5_gn_5_71841 Lactuca sativa HOM05D002864 ORTHO05D008485 5.2e-14 80.9 55 72.7
Solyc09g050040.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 5.2e-14 80.9 53 81.1
CARHR288210 Cardamine hirsuta HOM05D002864 ORTHO05D008485 6.8e-14 80.5 53 79.2
Psat0ss7220g0040 Pisum sativum HOM05D002864 ORTHO05D008485 6.8e-14 80.5 53 79.2
AUR62042335 Chenopodium quinoa HOM05D002864 ORTHO05D008485 8.9e-14 80.1 55 72.7
SHI26647 Sapria himalayana HOM05D002864 ORTHO05D008485 2.0e-13 79.0 53 77.4
Gohir.A06G146200 Gossypium hirsutum HOM05D002864 ORTHO05D008485 3.4e-13 78.2 53 79.2
PGR028G0017 Punica granatum HOM05D002864 ORTHO05D008485 3.4e-13 78.2 76 60.5
unitig_87.g28031 Utricularia gibba HOM05D002864 ORTHO05D008485 4.4e-13 77.8 55 72.7
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 7.6e-13 77.0 55 72.7
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 7.6e-13 77.0 55 72.7
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 9.9e-13 76.6 53 77.4
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 6.4e-12 73.9 53 71.7
DCAR_032433 Daucus carota HOM05D002864 ORTHO05D008485 1.1e-11 73.2 76 57.9
Ah.09g227250 Amaranthus hybridus HOM05D002864 ORTHO05D008485 2.4e-11 72.0 78 59.0
ClCG06G009270 Citrullus lanatus HOM05D002864 ORTHO05D008485 4.1e-11 71.2 51 72.5
Aqoxy12s038 Aquilegia oxysepala HOM05D002864 ORTHO05D008485 7.1e-11 70.5 77 55.8
TAR371G0939 Trochodendron aralioides HOM05D002864 ORTHO05D008485 2.7e-10 68.6 54 70.4
HanXRQChr13g0389461 Helianthus annuus HOM05D002864 ORTHO05D008485 7.8e-10 67.0 55 65.5
Rhsim07G0136600 Rhododendron simsii HOM05D002864 ORTHO05D008485 7.8e-10 67.0 78 55.1
arahy.Tifrunner.gnm1.ann1.G1F49J Arachis hypogaea HOM05D002864 ORTHO05D008485 1.3e-09 66.2 40 85.0
SHI40661 Sapria himalayana HOM05D002864 ORTHO05D008485 1.3e-09 66.2 61 65.6
ATR0709G086 Amborella trichopoda HOM05D002864 ORTHO05D008485 3.9e-09 64.7 70 55.7
CAN.G1542.4 Capsicum annuum HOM05D002864 ORTHO05D008485 2.5e-08 62.0 53 64.2
MELO3C035260.2 Cucumis melo HOM05D002864 ORTHO05D008485 4.3e-08 61.2 40 80.0
MELO3C000759.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.1e-07 58.9 40 77.5
HanXRQChr13g0389471 Helianthus annuus HOM05D002864 ORTHO05D008485 8.1e-07 57.0 38 73.7


User provided reference genes

Program Settings