Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.2e-85 319.7 154 100.0
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 4.4e-83 311.2 154 96.1
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 8.0e-77 290.4 151 90.1
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.4e-76 289.7 141 99.3
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 1.9e-70 269.2 149 85.2
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 2.3e-68 262.3 131 95.4
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 5.2e-68 261.2 131 94.7
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 2.0e-67 259.2 133 92.5
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 4.7e-61 238.0 126 88.1
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.2e-59 233.4 126 85.7
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.0e-59 232.6 126 84.1
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 1.3e-58 229.9 125 84.0
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 2.9e-58 228.8 133 82.7
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 3.7e-58 228.4 128 81.2
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 2.4e-57 225.7 126 81.7
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 3.2e-57 225.3 126 81.7
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 4.1e-57 224.9 125 83.2
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 4.1e-57 224.9 138 73.9
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 5.4e-57 224.6 125 83.2
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 5.4e-57 224.6 126 81.0
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 7.0e-57 224.2 126 81.7
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 9.2e-57 223.8 125 80.8
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 1.2e-56 223.4 126 81.7
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.6e-56 223.0 125 83.2
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 2.0e-56 222.6 125 83.2
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 4.6e-56 221.5 125 81.6
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.9e-56 221.1 148 72.3
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 1.0e-55 220.3 129 81.4
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.3e-55 219.9 148 71.6
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.3e-55 219.9 129 79.1
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.7e-55 219.5 128 81.2
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 1.7e-55 219.5 126 81.0
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.7e-55 219.5 126 80.2
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 2.3e-55 219.2 127 75.6
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 2.9e-55 218.8 130 77.7
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.9e-55 218.8 148 70.9
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 3.9e-55 218.4 125 80.0
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 3.9e-55 218.4 128 78.9
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 3.9e-55 218.4 132 76.5
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 5.0e-55 218.0 130 80.8
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 5.0e-55 218.0 128 78.9
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 5.0e-55 218.0 125 80.8
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 6.6e-55 217.6 148 71.6
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 6.6e-55 217.6 126 79.4
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 6.6e-55 217.6 126 80.2
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 6.6e-55 217.6 126 80.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 1.1e-54 216.9 128 78.9
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 1.1e-54 216.9 128 78.9
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.5e-54 216.5 129 78.3
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.5e-54 215.7 148 70.3
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 3.3e-54 215.3 127 78.7
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 3.3e-54 215.3 127 78.7
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 4.3e-54 214.9 126 78.6
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 4.3e-54 214.9 130 79.2
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 5.6e-54 214.5 128 76.6
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 5.6e-54 214.5 129 74.4
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 9.5e-54 213.8 134 73.9
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 9.5e-54 213.8 129 74.4
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 9.5e-54 213.8 126 77.8
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 1.2e-53 213.4 125 78.4
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 1.2e-53 213.4 128 78.1
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 2.1e-53 212.6 127 79.5
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 2.1e-53 212.6 128 76.6
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 3.6e-53 211.8 125 76.8
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 6.1e-53 211.1 128 74.2
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 8.0e-53 210.7 147 69.4
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 8.0e-53 210.7 131 72.5
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 1.0e-52 210.3 145 69.0
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 1.0e-52 210.3 150 67.3
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 1.4e-52 209.9 132 72.7
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 1.4e-52 209.9 127 77.2
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.8e-52 209.5 132 72.0
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.8e-52 209.5 132 72.0
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 2.3e-52 209.1 126 74.6
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 3.1e-52 208.8 133 70.7
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 3.1e-52 208.8 133 70.7
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 4.0e-52 208.4 132 71.2
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 6.8e-52 207.6 145 68.3
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 8.9e-52 207.2 126 75.4
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 8.9e-52 207.2 125 76.8
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 8.9e-52 207.2 164 63.4
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.2e-51 206.8 126 76.2
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.5e-51 206.5 122 77.9
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 2.0e-51 206.1 145 68.3
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 4.4e-51 204.9 127 74.0
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 4.4e-51 204.9 112 85.7
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 7.5e-51 204.1 126 73.0
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 9.8e-51 203.8 123 74.0
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 9.8e-51 203.8 128 69.5
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 1.7e-50 203.0 131 71.0
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 1.9e-49 199.5 112 82.1
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 8.6e-47 190.7 128 66.4
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 1.5e-46 189.9 127 65.4
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.9e-46 189.5 125 66.4
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 3.6e-45 185.3 116 72.4
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 3.1e-44 182.2 126 61.9
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 5.8e-43 177.9 125 65.6
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 8.3e-42 174.1 126 58.7
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.6e-40 169.9 125 59.2
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 1.9e-38 162.9 109 74.3
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 3.1e-36 155.6 125 53.6
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 2.9e-34 149.1 132 56.1
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.5e-30 136.7 79 81.0
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 1.6e-29 133.3 124 50.8
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 2.1e-29 132.9 128 50.0
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 6.2e-29 131.3 128 48.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 4.0e-28 128.6 151 45.7
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.0e-27 126.3 92 69.6
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 2.4e-25 119.4 93 65.6
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 9.0e-20 100.9 53 81.1
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.2e-19 100.5 68 66.2
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 4.4e-19 98.6 54 79.6
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 3.2e-17 92.4 54 68.5
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.2e-16 90.5 53 77.4
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 2.1e-16 89.7 53 71.7
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.8e-10 68.9 63 50.8
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.9e-10 68.6 63 50.8
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 2.3e-07 59.7 35 80.0


User provided reference genes

Program Settings