Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 8.5e-246 853.2 423 100.0
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.3e-214 749.6 403 93.1
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.3e-190 669.1 384 86.7
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 3.0e-190 668.7 377 87.5
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 2.3e-187 659.1 388 84.5
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 2.2e-185 652.5 377 85.9
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 8.3e-185 650.6 390 84.6
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 8.4e-153 544.3 389 70.7
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 9.3e-152 540.8 393 68.7
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.6e-148 530.0 394 67.5
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.1e-148 529.6 389 68.6
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 3.7e-148 528.9 382 70.7
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 8.2e-148 527.7 392 68.4
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 6.9e-147 524.6 311 80.4
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 6.9e-147 524.6 390 68.5
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 2.6e-146 522.7 383 67.9
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.6e-146 522.7 396 67.2
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 1.3e-145 520.4 387 68.2
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.3e-145 520.4 315 78.1
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 2.2e-145 519.6 311 80.1
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.1e-144 517.3 394 69.3
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.4e-144 516.9 388 67.8
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 2.5e-144 516.2 310 80.0
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 3.2e-144 515.8 394 66.0
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 3.2e-144 515.8 373 69.2
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 4.2e-144 515.4 316 76.9
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 5.5e-144 515.0 399 64.9
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 7.1e-144 514.6 395 66.6
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 9.3e-144 514.2 389 66.6
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 9.3e-144 514.2 398 64.6
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 1.6e-143 513.5 403 64.0
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 3.5e-143 512.3 316 76.6
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 7.9e-143 511.1 381 69.0
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 1.0e-142 510.8 313 77.3
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 2.3e-142 509.6 385 66.5
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 3.9e-142 508.8 316 77.2
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.9e-142 508.8 394 67.3
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 8.7e-142 507.7 372 67.7
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 1.5e-141 506.9 311 78.1
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 1.5e-141 506.9 327 74.9
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 3.3e-141 505.8 394 65.0
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 3.3e-141 505.8 385 66.5
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 4.3e-141 505.4 311 76.2
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 7.4e-141 504.6 390 68.2
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 9.7e-141 504.2 382 66.5
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.3e-140 503.8 401 62.8
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-140 503.8 311 77.2
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 1.6e-140 503.4 319 74.9
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 6.9e-139 498.0 311 76.2
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 6.9e-139 498.0 310 75.5
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 1.2e-138 497.3 322 72.7
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 1.2e-138 497.3 311 76.5
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.2e-138 497.3 311 76.5
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.5e-138 496.9 308 76.3
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 1.5e-138 496.9 384 64.8
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 2.0e-138 496.5 398 62.1
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 2.0e-138 496.5 321 73.5
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.0e-138 496.5 323 74.0
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 2.0e-138 496.5 391 65.2
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 2.6e-138 496.1 359 68.8
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 4.5e-138 495.4 340 71.2
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 5.9e-138 495.0 397 65.2
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 1.0e-137 494.2 393 65.1
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 1.7e-137 493.4 381 63.8
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.7e-137 493.4 314 74.2
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 1.7e-137 493.4 310 76.5
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 2.9e-137 492.7 371 65.8
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 3.8e-137 492.3 390 65.4
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 3.8e-137 492.3 379 64.4
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 6.5e-137 491.5 313 72.8
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.5e-137 491.1 308 76.0
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 8.5e-137 491.1 389 63.8
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 1.1e-136 490.7 323 70.9
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.1e-136 490.7 311 75.9
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 1.4e-136 490.3 355 67.3
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 1.4e-136 490.3 352 68.2
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 1.4e-136 490.3 388 65.5
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.5e-136 489.6 379 63.6
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 4.2e-136 488.8 394 64.2
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 5.5e-136 488.4 308 75.0
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 7.2e-136 488.0 390 63.3
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 7.2e-136 488.0 308 75.6
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 9.4e-136 487.6 308 75.6
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 1.6e-135 486.9 326 71.5
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 2.7e-135 486.1 323 70.9
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 3.6e-135 485.7 318 72.3
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 3.6e-135 485.7 311 73.0
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 7.9e-135 484.6 314 72.6
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 1.8e-134 483.4 379 62.8
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.8e-134 483.4 379 62.8
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 3.9e-134 482.3 384 63.8
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 8.8e-134 481.1 331 71.6
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.5e-133 480.3 311 72.7
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 3.3e-133 479.2 389 62.0
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 4.8e-132 475.3 308 73.4
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 2.4e-131 473.0 314 71.0
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 5.3e-131 471.9 327 68.2
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 1.2e-130 470.7 283 78.4
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 2.6e-130 469.5 384 61.2
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 7.7e-130 468.0 384 61.2
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.3e-129 467.2 500 52.4
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 3.8e-129 465.7 306 71.2
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 7.9e-127 458.0 316 70.9
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 1.1e-125 454.1 310 69.7
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 3.3e-125 452.6 313 69.6
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 1.9e-120 436.8 311 69.5
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.9e-120 436.8 268 75.4
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 9.4e-120 434.5 268 74.3
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 3.6e-119 432.6 311 66.9
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 5.2e-118 428.7 441 52.8
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 5.2e-118 428.7 355 63.1
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 6.7e-118 428.3 290 71.0
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 1.5e-117 427.2 310 65.2
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.0e-117 426.8 314 65.0
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 5.7e-117 425.2 305 66.2
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 9.7e-117 424.5 311 65.9
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 6.3e-116 421.8 311 65.3
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.1e-115 421.0 313 65.5
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.3e-113 414.1 311 64.3
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 2.2e-113 413.3 311 63.0
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.2e-111 407.5 262 73.3
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.2e-111 407.5 326 59.8
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 4.8e-108 395.6 308 64.0
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.9e-98 362.1 268 65.3
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 6.8e-94 348.6 344 52.3
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 5.7e-93 345.5 316 58.5
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.5e-88 330.9 276 60.1
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 5.2e-86 322.4 257 64.6
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 1.7e-81 307.4 242 59.9
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 3.1e-78 296.6 308 52.3
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 1.2e-74 284.6 361 45.4
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 1.1e-64 251.5 216 63.4
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 3.8e-60 236.5 174 60.9
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.6e-58 231.1 266 44.4
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 1.7e-52 211.1 162 60.5
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 7.1e-43 179.1 101 85.1
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 1.5e-40 171.4 157 58.6
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 3.4e-37 160.2 91 75.8
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 2.6e-29 134.0 123 50.4
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 4.1e-22 110.2 74 70.3
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 1.2e-13 82.0 52 80.8
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 1.2e-13 82.0 52 80.8
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.2e-13 82.0 57 57.9
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.4e-11 75.1 58 69.0
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 1.0e-09 68.9 57 57.9
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.3e-07 62.0 50 70.0
MBI04_g21513_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D019566 3.7e-07 60.5 77 50.6


User provided reference genes

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