Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0022362g0010 Nicotiana tabacum HOM05D006453 ORTHO05D008280 1.7e-143 512.7 266 100.0
Nitab4.5_0001330g0010 Nicotiana tabacum HOM05D006453 ORTHO05D008280 5.5e-126 454.5 266 91.0
PGSC0003DMG400010935 Solanum tuberosum HOM05D006453 ORTHO05D008280 2.4e-105 386.0 266 76.7
Sopen01g023080 Solanum pennellii HOM05D006453 ORTHO05D008280 2.7e-104 382.5 266 75.9
Solyc01g057780.3 Solanum lycopersicum HOM05D006453 ORTHO05D008280 2.9e-103 379.0 266 75.6
Peaxi162Scf00563g00316 Petunia axillaris HOM05D006453 ORTHO05D008280 1.9e-102 376.3 266 76.3
CAN.G595.6 Capsicum annuum HOM05D006453 ORTHO05D008280 3.7e-98 362.1 266 75.6
MSTRG.6251 Avicennia marina HOM05D006453 ORTHO05D008280 1.3e-63 247.3 268 55.2
Oeu044203.1 Olea europaea HOM05D006453 ORTHO05D008280 1.5e-62 243.8 257 55.6
Thecc.05G240300 Theobroma cacao HOM05D006453 ORTHO05D008280 2.4e-60 236.5 260 54.2
Actinidia37830 Actinidia chinensis HOM05D006453 ORTHO05D008280 4.0e-60 235.7 277 52.3
CSS0043580 Camellia sinensis var. sinensis HOM05D006453 ORTHO05D008280 4.0e-60 235.7 271 51.3
CSS0021093 Camellia sinensis var. sinensis HOM05D006453 ORTHO05D008280 2.6e-59 233.0 271 50.9
TWI32G1104 Tripterygium wilfordii HOM05D006453 ORTHO05D008280 7.6e-59 231.5 265 52.5
Lalb_Chr22g0358481 Lupinus albus HOM05D006453 ORTHO05D008280 2.2e-58 229.9 286 50.7
Duzib177G0835 Durio zibethinus HOM05D006453 ORTHO05D008280 1.9e-57 226.9 263 52.9
Ca_03446_v3 Cicer arietinum L. HOM05D006453 ORTHO05D008280 3.2e-57 226.1 261 52.5
Haze_20390 Corylus avellana HOM05D006453 ORTHO05D008280 7.1e-57 224.9 271 52.4
QL07p016723 Quercus lobata HOM05D006453 ORTHO05D008280 1.2e-56 224.2 266 50.4
Medtr7g087047 Medicago truncatula HOM05D006453 ORTHO05D008280 1.6e-56 223.8 261 51.7
Psat3g085600 Pisum sativum HOM05D006453 ORTHO05D008280 1.6e-56 223.8 261 52.9
TPR.G7838 Trifolium pratense HOM05D006453 ORTHO05D008280 1.6e-56 223.8 261 51.7
Lj2C416G9 Lonicera japonica HOM05D006453 ORTHO05D008280 2.1e-56 223.4 266 52.3
vmacro07642 Vaccinium macrocarpon HOM05D006453 ORTHO05D008280 2.1e-56 223.4 290 51.0
Eucgr.K02987 Eucalyptus grandis HOM05D006453 ORTHO05D008280 4.6e-56 222.2 264 52.7
Glyma.03G007200 Glycine max HOM05D006453 ORTHO05D008280 7.9e-56 221.5 261 51.0
Cfa019867 Carpinus fangiana HOM05D006453 ORTHO05D008280 1.0e-55 221.1 269 50.2
DCAR_020643 Daucus carota HOM05D006453 ORTHO05D008280 1.8e-55 220.3 279 48.7
Rhsim03G0046400 Rhododendron simsii HOM05D006453 ORTHO05D008280 1.8e-55 220.3 290 50.0
Eucgr.A02151 Eucalyptus grandis HOM05D006453 ORTHO05D008280 6.7e-55 218.4 261 50.2
Cpa.g.sc73.5 Carica papaya HOM05D006453 ORTHO05D008280 8.7e-55 218.0 271 50.9
Potri.013G067200 Populus trichocarpa HOM05D006453 ORTHO05D008280 1.5e-54 217.2 291 48.1
COL.COLO4_20073 Corchorus olitorius HOM05D006453 ORTHO05D008280 1.9e-54 216.9 261 53.3
MD14G1010700 Malus domestica HOM05D006453 ORTHO05D008280 1.9e-54 216.9 260 49.2
Sed0009752 Sechium edule HOM05D006453 ORTHO05D008280 4.3e-54 215.7 265 49.4
TAR633G1955 Trochodendron aralioides HOM05D006453 ORTHO05D008280 5.6e-54 215.3 277 49.5
arahy.Tifrunner.gnm1.ann1.5FGX2C Arachis hypogaea HOM05D006453 ORTHO05D008280 7.4e-54 214.9 277 50.2
Gohir.A08G220800 Gossypium hirsutum HOM05D006453 ORTHO05D008280 7.4e-54 214.9 263 53.2
MELO3C009680.2 Cucumis melo HOM05D006453 ORTHO05D008280 9.6e-54 214.5 264 49.6
Ciclev10030654m.g Citrus clementina HOM05D006453 ORTHO05D008280 2.1e-53 213.4 274 49.6
MD12G1012900 Malus domestica HOM05D006453 ORTHO05D008280 2.1e-53 213.4 261 50.6
CsaV3_3G039350 Cucumis sativus L. HOM05D006453 ORTHO05D008280 2.8e-53 213.0 264 49.2
Glyma.19G118900 Glycine max HOM05D006453 ORTHO05D008280 2.8e-53 213.0 262 50.4
Gorai.004G252900 Gossypium raimondii HOM05D006453 ORTHO05D008280 2.8e-53 213.0 263 52.1
Manes.08G151700 Manihot esculenta HOM05D006453 ORTHO05D008280 3.7e-53 212.6 289 48.8
Prupe.7G017200 Prunus persica HOM05D006453 ORTHO05D008280 3.7e-53 212.6 271 49.1
SalBow1G7395 Salvia bowleyana HOM05D006453 ORTHO05D008280 4.8e-53 212.2 317 43.8
arahy.Tifrunner.gnm1.ann1.I1EK11 Arachis hypogaea HOM05D006453 ORTHO05D008280 6.2e-53 211.8 278 50.0
ClCG10G017040 Citrullus lanatus HOM05D006453 ORTHO05D008280 8.1e-53 211.5 262 48.1
Gohir.D08G237400 Gossypium hirsutum HOM05D006453 ORTHO05D008280 8.1e-53 211.5 263 52.1
CiPaw.09G165800 Carya illinoinensis HOM05D006453 ORTHO05D008280 3.1e-52 209.5 266 51.1
RcHm_v2.0_Chr3g0495901 Rosa chinensis HOM05D006453 ORTHO05D008280 4.0e-52 209.1 260 48.5
GSVIVG01029939001 Vitis vinifera HOM05D006453 ORTHO05D008280 1.2e-51 207.6 261 47.9
TAR636G0230 Trochodendron aralioides HOM05D006453 ORTHO05D008280 2.6e-51 206.5 285 48.1
Sc07g0007630 Simmondsia chinensis HOM05D006453 ORTHO05D008280 4.5e-51 205.7 261 50.2
Dinv37027 Davidia involucrata HOM05D006453 ORTHO05D008280 5.8e-51 205.3 238 53.8
FAN15G3048 Fragaria x ananassa HOM05D006453 ORTHO05D008280 1.7e-50 203.8 259 49.0
VMungo1383G3098 Vigna mungo HOM05D006453 ORTHO05D008280 2.2e-50 203.4 262 50.0
FvH4_2g05470 Fragaria vesca HOM05D006453 ORTHO05D008280 8.4e-50 201.4 259 49.4
Lj1g0022011 Lotus japonicus HOM05D006453 ORTHO05D008280 8.4e-50 201.4 296 44.9
PGR042G0732 Punica granatum HOM05D006453 ORTHO05D008280 1.1e-49 201.1 264 48.5
Atru.chr2.1559 Acer truncatum HOM05D006453 ORTHO05D008280 9.3e-49 198.0 270 48.5
Phvul.001G107100 Phaseolus vulgaris HOM05D006453 ORTHO05D008280 1.2e-48 197.6 261 49.4
Ah.02g116050 Amaranthus hybridus HOM05D006453 ORTHO05D008280 4.6e-48 195.7 261 47.1
AUR62036516 Chenopodium quinoa HOM05D006453 ORTHO05D008280 6.0e-48 195.3 261 46.4
MBI19_g44505_MAGBIO Magnolia biondii HOM05D006453 ORTHO05D008280 6.0e-48 195.3 285 46.7
ECA240G3357 Erigeron canadensis HOM05D006453 ORTHO05D008280 7.9e-48 194.9 265 46.4
Aqoxy7G02016 Aquilegia oxysepala HOM05D006453 ORTHO05D008280 1.1e-46 191.0 272 46.7
AUR62037057 Chenopodium quinoa HOM05D006453 ORTHO05D008280 1.1e-46 191.0 261 49.0
Sabra13G0058600 Salix brachista HOM05D006453 ORTHO05D008280 2.5e-46 189.9 258 47.3
Hund15183 Selenicereus undatus HOM05D006453 ORTHO05D008280 2.5e-46 189.9 267 46.4
Migut.K00219 Erythranthe guttata HOM05D006453 ORTHO05D008280 2.1e-45 186.8 140 73.6
HanXRQChr08g0233621 Helianthus annuus HOM05D006453 ORTHO05D008280 2.4e-44 183.3 266 44.7
PSO675G7297 Papaver somniferum HOM05D006453 ORTHO05D008280 5.3e-44 182.2 266 45.5
HPP92_017897 Vanilla planifolia HOM05D006453 ORTHO05D008280 6.9e-44 181.8 282 43.6
unitig_37.g12689 Utricularia gibba HOM05D006453 ORTHO05D008280 1.2e-43 181.0 265 46.0
HanXRQChr03g0076821 Helianthus annuus HOM05D006453 ORTHO05D008280 4.5e-43 179.1 98 87.8
EL10Ac5g11680 Beta vulgaris HOM05D006453 ORTHO05D008280 5.8e-43 178.7 261 45.6
ECA246G3617 Erigeron canadensis HOM05D006453 ORTHO05D008280 5.8e-43 178.7 263 46.4
PSO541G6198 Papaver somniferum HOM05D006453 ORTHO05D008280 1.0e-42 177.9 266 45.1
Zm00001eb369080 Zea mays HOM05D006453 ORTHO05D008280 8.4e-42 174.9 313 40.6
THA.LOC104820798 Tarenaya hassleriana HOM05D006453 ORTHO05D008280 4.2e-41 172.6 261 43.7
Os01g0815700 Oryza sativa ssp. japonica HOM05D006453 ORTHO05D008280 7.1e-41 171.8 112 76.8
CDE04G2250 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 3.5e-40 169.5 310 38.7
CDE04G0989 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 4.6e-40 169.1 112 78.6
Zm00001eb149830 Zea mays HOM05D006453 ORTHO05D008280 3.0e-39 166.4 318 40.6
ATR0068G066 Amborella trichopoda HOM05D006453 ORTHO05D008280 2.2e-37 160.2 88 88.6
SGA_v2.0_scaffold12G06081 Striga asiatica HOM05D006453 ORTHO05D008280 6.9e-36 155.2 191 51.3
Lsat_1_v5_gn_5_2441 Lactuca sativa HOM05D006453 ORTHO05D008280 2.0e-35 153.7 246 41.9
C09p59360 Brassica napus HOM05D006453 ORTHO05D008280 2.2e-34 150.2 282 42.6
BolC9t58775H Brassica oleracea HOM05D006453 ORTHO05D008280 2.2e-34 150.2 282 42.6
CDE02G4069 Ceratophyllum demersum HOM05D006453 ORTHO05D008280 2.2e-34 150.2 150 60.0
Dinv14566 Davidia involucrata HOM05D001832 ORTHO05D001861 5.0e-34 149.1 177 52.0
Lsat_1_v5_gn_9_93321 Lactuca sativa HOM05D006453 ORTHO05D008280 5.0e-34 149.1 259 42.1
CARHR195380 Cardamine hirsuta HOM05D006453 ORTHO05D008280 1.4e-33 147.5 292 41.1
BcaB01g04912 Brassica carinata HOM05D006453 ORTHO05D008280 1.9e-33 147.1 289 39.8
AL6G28880 Arabidopsis lyrata HOM05D006453 ORTHO05D008280 3.2e-33 146.4 285 40.7
BcaB01g05155 Brassica carinata HOM05D006453 ORTHO05D008280 4.2e-33 146.0 267 38.6
BolC3t13477H Brassica oleracea HOM05D006453 ORTHO05D008280 4.2e-33 146.0 267 38.6
BcaB08g36744 Brassica carinata HOM05D006453 ORTHO05D008280 5.5e-33 145.6 294 40.1
A03p08490 Brassica napus HOM05D006453 ORTHO05D008280 5.5e-33 145.6 285 38.9
BraA03t10172Z Brassica rapa HOM05D006453 ORTHO05D008280 5.5e-33 145.6 285 38.9
C03p09890 Brassica napus HOM05D006453 ORTHO05D008280 1.2e-32 144.4 267 38.6
BraA10t44228Z Brassica rapa HOM05D006453 ORTHO05D008280 2.7e-32 143.3 284 39.8
A10p21660 Brassica napus HOM05D006453 ORTHO05D008280 6.1e-32 142.1 284 40.1
AT5G17790 Arabidopsis thaliana HOM05D006453 ORTHO05D008280 1.0e-31 141.4 290 38.3
Sp6g26460 Schrenkiella parvula HOM05D006453 ORTHO05D008280 6.7e-31 138.7 298 38.3
Carub.0006s1602 Capsella rubella HOM05D006453 ORTHO05D008280 2.5e-30 136.7 293 39.2
Thhalv10012756m.g Eutrema salsugineum HOM05D006453 ORTHO05D008280 3.3e-30 136.3 293 38.6
Aa31LG11G11790 Aethionema arabicum HOM05D006453 ORTHO05D008280 7.4e-30 135.2 93 73.1
Aa31LG2G1800 Aethionema arabicum HOM05D006453 ORTHO05D008280 1.2e-27 127.9 171 49.1
THA.LOC104798844 Tarenaya hassleriana HOM05D006453 ORTHO05D008280 1.0e-26 124.8 171 47.4
SHI14865 Sapria himalayana HOM05D006453 ORTHO05D008280 4.1e-20 102.8 88 59.1
FAN27G0370 Fragaria x ananassa HOM05D006453 ORTHO05D008280 2.3e-15 87.0 66 60.6
Nn3g20153 Nelumbo nucifera HOM05D006453 ORTHO05D008280 4.4e-14 82.8 64 62.5
Cc06_g21620 Coffea canephora HOM05D006453 ORTHO05D008280 1.0e-10 71.6 69 58.0
Dinv14567 Davidia involucrata HOM05D006453 ORTHO05D008280 5.0e-10 69.3 202 31.2


User provided reference genes

Program Settings