Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.0e-170 601.3 289 100.0
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.7e-165 585.9 312 92.3
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 3.4e-161 571.6 289 93.8
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 6.3e-160 567.4 289 93.4
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.5e-156 555.4 324 84.3
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 4.6e-150 534.6 265 95.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 2.1e-147 525.8 303 84.8
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 2.9e-144 515.4 289 84.1
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 4.7e-139 498.0 288 82.6
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 9.9e-137 490.3 296 79.1
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.7e-136 489.6 325 73.5
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 1.4e-135 486.5 299 76.6
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.4e-135 486.5 301 77.1
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 3.2e-135 485.3 301 75.1
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 3.2e-135 485.3 309 76.4
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 7.1e-135 484.2 289 79.9
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 1.2e-134 483.4 294 76.2
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 3.5e-134 481.9 307 76.2
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 4.6e-134 481.5 292 78.4
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 6.0e-134 481.1 301 74.8
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 7.8e-134 480.7 292 77.4
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 7.8e-134 480.7 301 76.4
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 5.1e-133 478.0 321 70.7
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 8.6e-133 477.2 300 74.3
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.1e-132 476.9 300 74.3
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.5e-132 475.7 301 76.4
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 2.5e-132 475.7 301 77.4
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 9.5e-132 473.8 301 76.7
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.6e-131 473.0 292 76.7
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.6e-131 473.0 291 77.3
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 2.8e-131 472.2 298 75.2
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 4.7e-131 471.5 308 73.1
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 4.7e-131 471.5 292 74.7
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 4.0e-130 468.4 296 74.3
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.5e-129 466.5 299 74.6
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 4.4e-129 464.9 302 73.5
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 5.8e-129 464.5 301 73.4
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 3.8e-128 461.8 297 74.7
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 6.4e-128 461.1 301 73.1
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 1.6e-126 456.4 299 72.9
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 6.0e-126 454.5 305 71.1
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 5.1e-125 451.4 292 75.3
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 5.1e-125 451.4 301 70.1
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 8.7e-125 450.7 292 75.3
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.5e-124 449.9 292 75.0
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 4.3e-124 448.4 296 72.3
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 4.7e-123 444.9 296 71.3
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 4.7e-123 444.9 291 73.9
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 6.2e-123 444.5 291 73.9
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.1e-122 443.7 303 70.6
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 4.0e-122 441.8 296 72.3
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 5.3e-122 441.4 294 71.8
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 6.9e-122 441.0 293 70.0
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 9.0e-122 440.7 288 71.5
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.5e-121 439.9 295 70.5
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 4.4e-121 438.3 243 84.0
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.7e-120 436.4 294 70.1
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 2.9e-120 435.6 286 71.7
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 2.9e-120 435.6 304 68.4
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 4.9e-120 434.9 289 71.3
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 8.4e-120 434.1 289 70.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 7.1e-119 431.0 296 69.3
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.6e-118 429.9 304 68.4
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 4.6e-118 428.3 301 67.8
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 6.6e-117 424.5 308 66.9
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 6.6e-117 424.5 309 66.7
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.5e-116 423.3 299 68.6
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 1.9e-116 422.9 304 66.8
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 6.2e-115 417.9 303 66.0
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.1e-114 417.2 303 65.7
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 1.4e-114 416.8 303 65.7
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 3.4e-113 412.1 303 65.0
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 4.5e-113 411.8 309 66.0
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 7.6e-113 411.0 307 65.8
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 9.9e-113 410.6 302 64.6
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.2e-112 409.5 291 67.7
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 4.9e-112 408.3 291 67.7
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.4e-112 407.9 291 67.4
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.4e-111 406.8 304 64.8
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.4e-111 406.8 310 64.5
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.4e-111 406.8 291 67.4
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 9.3e-111 404.1 288 66.3
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.6e-110 403.3 287 66.9
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.3e-109 399.4 291 66.7
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 1.5e-108 396.7 288 64.9
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 3.3e-108 395.6 266 71.4
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 3.3e-108 395.6 266 71.4
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 7.4e-108 394.4 288 64.2
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 3.1e-106 389.0 297 67.0
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 1.3e-101 373.6 292 62.0
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.7e-101 371.3 245 71.4
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.3e-92 342.4 254 65.4
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 1.2e-89 334.0 277 61.7
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 2.9e-88 329.3 238 69.7
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 9.4e-87 324.3 262 59.5
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 3.9e-85 318.9 292 54.1
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 5.9e-81 305.1 245 60.8
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 1.7e-80 303.5 195 76.4
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 7.2e-79 298.1 298 53.4
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 6.1e-78 295.0 265 56.6
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.6e-76 289.7 246 58.5
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 5.7e-76 288.5 242 56.2
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.3e-72 277.3 242 53.3
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.6e-62 242.7 175 66.9
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 1.2e-60 237.7 272 43.4
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.4e-37 161.0 100 77.0
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.2e-34 149.8 123 59.3
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 4.7e-22 109.4 246 28.0
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 6.4e-19 99.0 302 27.2
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.1e-18 98.2 88 59.1
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.6e-17 94.4 245 27.8
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 8.9e-13 78.6 333 23.7
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 1.2e-12 78.2 53 77.4
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 8.7e-08 62.0 49 61.2
arahy.Tifrunner.gnm1.ann1.505PCM Arachis hypogaea HOM05D003289 ORTHO05D016559 2.1e-06 57.4 39 64.1


User provided reference genes

Program Settings