Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1708.0 983 100.0
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1677.1 986 97.1
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1527.7 986 89.5
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1503.4 987 88.0
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1462.6 987 86.2
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1459.9 987 86.3
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1455.7 987 86.1
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 2.9e-305 1052.0 1042 65.2
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 3.5e-303 1045.0 1029 62.7
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 2.3e-302 1042.3 1022 64.2
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 2.3e-302 1042.3 1033 61.7
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 6.7e-302 1040.8 1047 65.1
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.8e-299 1032.7 1038 63.3
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 6.9e-299 1030.8 1043 64.6
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 3.2e-296 1021.9 1035 64.1
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 5.5e-296 1021.1 1051 61.6
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 2.1e-292 1009.2 1041 63.4
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 1.5e-290 1003.0 1029 63.6
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 1.3e-289 1000.0 1002 65.5
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 1.4e-288 996.5 1001 60.4
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 3.2e-288 995.3 1042 59.4
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 4.2e-288 995.0 1010 60.3
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 2.1e-287 992.6 1035 62.3
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 1.3e-286 989.9 1036 61.7
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 3.9e-286 988.4 1047 59.4
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 2.5e-285 985.7 1041 63.2
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 4.3e-285 984.9 1040 62.3
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 6.3e-284 981.1 1033 62.7
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 6.3e-284 981.1 1035 62.9
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 2.1e-279 966.1 1022 62.3
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 2.3e-278 962.6 1043 62.2
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 1.5e-277 959.9 952 64.5
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 1.1e-275 953.7 1019 60.4
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 3.1e-275 952.2 1034 59.1
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 4.5e-274 948.3 1040 59.0
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 1.7e-273 946.4 1025 62.0
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 1.1e-272 943.7 1032 60.8
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 3.6e-271 938.7 1038 58.9
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 4.7e-271 938.3 1018 61.1
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 3.9e-270 935.3 1143 55.6
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 6.7e-270 934.5 1035 58.9
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 1.1e-269 933.7 1047 59.9
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 7.4e-269 931.0 990 58.7
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 1.3e-268 930.2 1036 60.5
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 3.7e-268 928.7 1039 60.3
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 3.7e-268 928.7 1005 59.7
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 8.2e-268 927.5 1023 61.4
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 1.1e-267 927.2 1041 59.5
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 3.1e-267 925.6 1037 60.0
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 4.1e-267 925.2 1019 60.5
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 6.5e-265 917.9 1032 60.1
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 6.5e-265 917.9 1042 60.3
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 1.4e-264 916.8 1040 59.1
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 3.2e-264 915.6 1036 58.0
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 2.7e-263 912.5 1035 57.5
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 6.7e-262 907.9 1028 58.8
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 3.3e-261 905.6 1028 58.2
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 4.4e-261 905.2 995 58.3
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 1.7e-260 903.3 1041 59.6
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 6.3e-260 901.4 1039 59.0
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 8.2e-260 901.0 1027 57.9
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 4.5e-258 895.2 1036 58.2
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 6.5e-257 891.3 1037 58.8
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.9e-256 889.8 1037 58.8
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 3.2e-256 889.0 1037 58.7
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 9.4e-256 887.5 989 58.3
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 6.1e-255 884.8 1039 58.3
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 6.1e-255 884.8 1024 57.7
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 2.2e-252 876.3 743 69.0
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 1.4e-251 873.6 1041 55.8
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 4.2e-248 862.1 1028 55.9
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 1.7e-241 840.1 1015 55.8
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 2.4e-235 819.7 1038 55.1
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 5.0e-233 812.0 1042 56.4
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 3.1e-230 802.7 892 56.8
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 9.8e-229 797.7 1058 53.0
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 2.4e-227 793.1 739 63.6
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.8e-223 779.6 734 64.0
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 8.3e-212 741.5 766 63.1
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 1.1e-206 724.5 1081 48.1
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 8.4e-204 714.9 943 52.4
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.1e-174 618.2 917 50.1
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 4.2e-163 579.7 1007 46.0
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 1.4e-134 485.0 578 60.0
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.4e-134 484.2 551 55.9
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 3.7e-127 460.3 777 42.3
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 5.1e-100 370.2 855 35.0
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.3e-84 318.2 351 57.0
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.5e-75 288.1 388 51.0
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 3.3e-51 208.0 267 52.1
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.1e-41 174.5 257 47.9
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 4.8e-34 151.0 236 49.6
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-30 137.9 315 33.0
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.5e-30 137.5 132 65.2
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.1e-25 123.2 277 37.5
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 5.5e-22 110.9 107 56.1
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.4e-20 106.3 161 45.3
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 3.0e-20 105.1 64 78.1
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 3.8e-15 88.2 908 22.5
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 5.5e-14 84.3 59 67.8
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 3.6e-13 81.6 89 48.3
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 3.1e-09 68.6 131 35.1
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 9.5e-06 57.0 71 53.5


User provided reference genes

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