Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 3.4e-181 638.3 334 100.0
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 2.8e-167 592.0 316 98.1
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 3.5e-162 575.1 334 91.3
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 3.0e-161 572.0 316 94.6
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 3.9e-161 571.6 316 94.3
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 5.1e-161 571.2 316 94.6
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 9.6e-160 567.0 316 93.7
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 2.9e-156 555.4 316 92.7
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 2.1e-151 539.3 316 89.9
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 3.8e-140 501.9 316 81.0
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 3.9e-137 491.9 314 79.6
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 6.7e-137 491.1 314 80.6
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 8.7e-137 490.7 332 77.4
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 2.5e-136 489.2 332 78.6
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 4.3e-136 488.4 332 75.6
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 9.6e-136 487.3 332 77.1
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 4.8e-135 485.0 332 75.9
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 8.2e-135 484.2 332 75.3
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 1.8e-134 483.0 314 79.3
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 5.3e-134 481.5 332 75.6
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 9.0e-134 480.7 332 75.9
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 1.5e-133 479.9 332 76.8
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 1.5e-133 479.9 314 77.7
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 2.0e-133 479.6 314 78.3
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 3.4e-133 478.8 332 75.9
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 4.5e-133 478.4 332 75.6
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 7.6e-133 477.6 332 75.0
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 1.3e-132 476.9 316 76.9
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 1.1e-131 473.8 316 76.3
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 1.4e-131 473.4 334 73.7
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 2.5e-131 472.6 314 79.0
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 2.5e-131 472.6 332 74.1
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 4.2e-131 471.9 322 76.7
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 7.2e-131 471.1 322 75.8
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 1.6e-130 469.9 332 72.9
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 2.7e-130 469.2 330 73.6
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 3.5e-130 468.8 332 74.7
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 1.1e-128 463.8 334 72.8
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 1.5e-128 463.4 332 72.9
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 1.9e-128 463.0 333 72.4
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 2.5e-128 462.6 332 72.6
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 4.3e-128 461.8 332 73.2
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 5.7e-128 461.5 332 72.6
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 5.7e-128 461.5 317 76.0
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 7.4e-128 461.1 314 74.8
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 4.8e-127 458.4 332 74.1
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 8.2e-127 457.6 334 72.2
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 1.4e-126 456.8 332 72.6
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 4.1e-126 455.3 316 73.4
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 6.9e-126 454.5 334 70.7
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 6.9e-126 454.5 334 70.7
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 6.9e-126 454.5 316 74.1
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 4.5e-125 451.8 334 70.1
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 4.5e-125 451.8 334 70.1
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 4.5e-125 451.8 334 70.1
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 4.5e-125 451.8 313 73.8
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 7.7e-125 451.1 334 69.8
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 1.3e-124 450.3 317 73.8
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 2.9e-124 449.1 332 70.2
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 2.9e-124 449.1 332 71.1
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 3.8e-124 448.7 332 70.8
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 5.0e-124 448.4 334 70.4
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 6.5e-124 448.0 337 70.6
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 8.5e-124 447.6 316 71.8
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 1.1e-123 447.2 334 69.8
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 4.2e-123 445.3 336 68.5
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 5.5e-123 444.9 314 72.9
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 7.2e-123 444.5 334 69.2
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 7.2e-123 444.5 333 70.0
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 9.4e-123 444.1 314 71.7
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 1.6e-122 443.4 314 71.7
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 2.1e-122 443.0 334 70.7
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 3.6e-122 442.2 334 69.5
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 4.6e-122 441.8 314 72.6
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 1.0e-121 440.7 331 69.2
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 1.0e-121 440.7 314 73.2
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 1.4e-121 440.3 332 69.6
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 1.8e-121 439.9 324 70.7
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 6.7e-121 438.0 332 69.9
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 8.8e-121 437.6 332 69.3
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 8.8e-121 437.6 332 68.1
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 4.3e-120 435.3 332 69.6
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 1.3e-119 433.7 332 68.4
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 2.8e-119 432.6 335 69.6
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.4e-118 429.5 345 67.5
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 2.4e-118 429.5 337 67.1
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 6.9e-118 427.9 336 66.4
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 1.2e-117 427.2 334 66.8
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 1.2e-117 427.2 337 66.8
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 2.0e-117 426.4 337 67.1
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 3.4e-117 425.6 337 67.1
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 3.4e-117 425.6 337 67.1
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 3.4e-117 425.6 337 66.5
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 4.5e-117 425.2 333 66.4
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 4.5e-117 425.2 319 68.3
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 1.0e-116 424.1 314 70.4
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 2.2e-116 422.9 306 71.9
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 2.2e-116 422.9 337 66.8
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 2.9e-116 422.5 283 78.8
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 2.9e-116 422.5 316 69.9
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 6.5e-116 421.4 316 69.9
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 3.2e-115 419.1 330 66.7
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 4.2e-115 418.7 337 65.9
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 7.9e-114 414.5 336 65.8
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 1.0e-113 414.1 316 68.4
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.1e-112 410.6 350 64.6
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 1.1e-112 410.6 332 64.5
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.8e-111 406.0 311 70.4
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.0e-108 397.5 330 67.3
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 8.5e-108 394.4 316 63.0
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 2.5e-107 392.9 311 66.6
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 7.2e-107 391.3 310 66.5
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 1.3e-103 380.6 316 61.1
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 1.4e-102 377.1 331 63.7
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 4.5e-101 372.1 295 65.8
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 2.9e-100 369.4 261 76.6
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 1.8e-97 360.1 312 63.5
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 2.6e-96 356.3 317 60.6
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.4e-94 350.5 306 63.1
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 2.1e-90 336.7 314 58.9
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 2.7e-90 336.3 319 55.5
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 3.0e-89 332.8 254 69.7
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 3.3e-75 286.2 238 64.7
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 1.2e-74 284.3 211 70.6
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 6.8e-73 278.5 321 49.2
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 8.9e-73 278.1 211 68.2
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 7.3e-67 258.5 327 47.1
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 1.2e-66 257.7 316 46.8
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 3.1e-65 253.1 259 54.4
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 8.3e-63 245.0 320 43.1
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.9e-54 217.2 264 50.8
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 5.4e-54 215.7 161 69.6
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 7.8e-53 211.8 319 41.4
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 2.0e-48 197.2 349 37.5
C02p61790 Brassica napus HOM05D004329 ORTHO05D005516 9.0e-33 145.2 97 73.2
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis HOM05D004329 ORTHO05D005516 7.1e-30 135.6 186 44.6
CAN.G865.5 Capsicum annuum HOM05D004329 ORTHO05D005516 3.0e-28 130.2 69 85.5
CARHR275770 Cardamine hirsuta HOM05D004329 ORTHO05D005516 3.9e-28 129.8 97 61.9
Haze_22596 Corylus avellana HOM05D004329 ORTHO05D010424 1.4e-22 111.3 72 70.8
Lsat_1_v5_gn_2_122301 Lactuca sativa HOM05D009063 ORTHO05D011082 6.3e-18 95.9 199 36.2
CSS0048280 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 2.0e-16 90.9 95 58.9
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 7.9e-13 79.0 265 29.4
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 8.7e-12 75.5 341 24.9
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 1.6e-10 71.2 43 74.4


User provided reference genes

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