Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016907g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 5.5e-248 860.5 442 100.0
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 2.4e-235 818.5 441 96.6
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 1.4e-230 802.7 441 93.4
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 6.0e-226 787.3 441 92.1
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 1.9e-224 782.3 441 91.4
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 5.5e-179 631.3 453 73.1
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 7.9e-178 627.5 453 72.4
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 1.9e-176 622.9 456 71.9
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 2.5e-176 622.5 458 72.1
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 2.4e-174 615.9 454 72.0
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 5.9e-173 611.3 443 72.0
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 5.9e-173 611.3 455 71.6
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 6.5e-172 607.8 461 70.7
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 9.4e-171 604.0 462 70.1
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 5.1e-169 598.2 426 73.7
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 8.8e-169 597.4 443 72.2
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 2.5e-168 595.9 453 70.0
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 3.1e-166 589.0 452 69.2
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 4.1e-166 588.6 465 69.0
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 7.7e-165 584.3 457 69.1
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 8.8e-161 570.9 465 68.4
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 7.4e-160 567.8 455 68.1
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 4.8e-159 565.1 449 68.2
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 4.8e-159 565.1 467 67.5
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 1.1e-158 563.9 456 67.3
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 1.8e-158 563.1 459 67.5
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 1.8e-158 563.1 452 65.9
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 1.2e-157 560.5 472 64.0
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 3.5e-157 558.9 455 67.7
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 4.5e-157 558.5 455 67.0
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 5.9e-157 558.1 458 65.7
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 2.9e-156 555.8 452 66.4
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 6.5e-156 554.7 463 66.1
FAN13G1880 Fragaria x ananassa HOM05D004811 ORTHO05D006888 8.5e-156 554.3 450 67.6
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 1.4e-155 553.5 461 67.0
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 4.2e-155 552.0 452 65.5
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 2.7e-154 549.3 464 66.2
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.6e-154 548.9 454 66.7
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 6.1e-154 548.1 454 66.1
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.0e-153 547.4 459 66.0
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 1.4e-153 547.0 464 66.2
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 3.9e-153 545.4 461 64.9
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 5.2e-153 545.0 455 65.3
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 6.7e-153 544.7 462 65.4
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 8.8e-153 544.3 456 64.7
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 2.0e-152 543.1 471 62.6
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 2.0e-152 543.1 453 64.7
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 2.6e-152 542.7 462 64.7
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 5.7e-152 541.6 471 62.6
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 9.7e-152 540.8 466 65.0
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 1.3e-151 540.4 462 64.3
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.4e-150 536.2 470 63.6
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 1.2e-149 533.9 459 64.5
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 2.0e-149 533.1 454 64.8
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 1.0e-148 530.8 456 64.3
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 1.3e-148 530.4 457 63.9
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 1.5e-147 526.9 469 61.6
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 1.9e-147 526.6 452 64.4
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 5.5e-147 525.0 442 66.1
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 2.7e-146 522.7 454 64.1
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 5.2e-145 518.5 455 62.0
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 1.5e-144 516.9 461 63.1
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 1.5e-144 516.9 458 63.1
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 2.6e-144 516.2 458 64.0
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 5.7e-144 515.0 461 62.9
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 7.5e-144 514.6 442 62.2
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 3.7e-143 512.3 443 63.4
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 4.8e-143 511.9 455 63.3
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 2.7e-141 506.1 448 61.6
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 7.2e-139 498.0 452 61.5
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 9.4e-139 497.7 449 61.0
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 4.4e-136 488.8 449 60.1
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 4.4e-136 488.8 449 60.1
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 2.2e-135 486.5 449 59.5
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 2.7e-133 479.6 451 58.3
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 3.5e-133 479.2 470 58.7
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 1.3e-132 477.2 446 59.2
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 2.3e-132 476.5 460 60.0
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 5.0e-132 475.3 451 59.2
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 5.0e-132 475.3 451 59.2
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 1.8e-129 466.8 475 55.4
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 1.5e-128 463.8 457 56.0
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 2.6e-128 463.0 449 56.8
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 3.5e-125 452.6 446 55.8
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 5.9e-125 451.8 374 62.3
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 1.3e-124 450.7 454 57.0
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.7e-124 450.3 462 56.1
CAN.G606.9 Capsicum annuum HOM05D004811 ORTHO05D006888 6.6e-124 448.4 352 72.4
Zm00001eb287160 Zea mays HOM05D004811 ORTHO05D006888 2.5e-123 446.4 445 55.7
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 1.2e-122 444.1 419 59.2
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 4.0e-121 439.1 453 55.4
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 4.0e-121 439.1 452 56.6
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 3.4e-120 436.0 421 56.8
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 4.4e-120 435.6 466 55.4
SGA_v2.0_scaffold55G19835 Striga asiatica HOM05D004811 ORTHO05D006888 2.5e-115 419.9 321 69.2
QL02p036407 Quercus lobata HOM05D004811 ORTHO05D006888 3.1e-105 386.3 212 89.2
QL02p036870 Quercus lobata HOM05D004811 ORTHO05D006888 3.1e-105 386.3 212 89.2
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 6.8e-105 385.2 432 53.2
MD09G1000100 Malus domestica HOM05D004811 ORTHO05D006888 7.8e-101 371.7 212 86.8
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 9.6e-99 364.8 511 44.2
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 2.1e-98 363.6 449 46.1
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 2.2e-95 353.6 538 41.8
RcHm_v2.0_Chr2g0146051 Rosa chinensis HOM05D004811 ORTHO05D006888 2.4e-94 350.1 453 51.4
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 6.0e-93 345.5 449 50.3
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.1e-91 341.3 440 49.5
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.1e-90 337.0 441 49.7
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.1e-90 337.0 447 49.2
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis HOM05D004811 ORTHO05D006888 4.2e-86 322.8 494 40.3
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 6.9e-81 305.4 360 54.7
CBR_g19801 Chara braunii HOM05D004811 ORTHO05D006888 6.7e-76 288.9 483 38.5
CAN.G606.10 Capsicum annuum HOM05D004811 ORTHO05D006888 4.5e-72 276.2 141 96.5
Sed0024483 Sechium edule HOM05D004811 ORTHO05D006888 7.4e-67 258.8 280 55.4
Cpa.g.sc111.49 Carica papaya HOM05D004811 ORTHO05D006888 1.5e-64 251.1 143 83.9
QL02p036387 Quercus lobata HOM05D004811 ORTHO05D006888 4.2e-62 243.0 241 58.9
QL02p036851 Quercus lobata HOM05D004811 ORTHO05D006888 1.6e-61 241.1 241 58.5
HPP92_028179 Vanilla planifolia HOM05D004811 ORTHO05D006888 1.8e-57 227.6 168 67.9
Actinidia09194 Actinidia chinensis HOM05D004811 ORTHO05D006888 3.9e-52 209.9 121 85.1
Sed0006977 Sechium edule HOM05D004811 ORTHO05D006888 2.0e-48 197.6 126 76.2
TPR.G39924 Trifolium pratense HOM05D004811 ORTHO05D006888 3.7e-42 176.8 221 51.6
Cpa.g.sc111.45 Carica papaya HOM05D004811 ORTHO05D006888 5.2e-36 156.4 185 52.4
PRCOL_00007255 Prasinoderma coloniale HOM05D004811 ORTHO05D006888 1.7e-34 151.4 372 33.1
Cpa.g.sc111.48 Carica papaya HOM05D004811 ORTHO05D006888 2.1e-29 134.4 101 65.3
MCO07G203 Micromonas commoda HOM05D004811 ORTHO05D006888 2.0e-27 127.9 247 32.8
SGA_v2.0_scaffold753G53552 Striga asiatica HOM05D004811 ORTHO05D006888 1.1e-25 122.1 124 62.1
Hund15156 Selenicereus undatus HOM05D004811 ORTHO05D006888 2.0e-24 117.9 171 48.5
HPP92_028180 Vanilla planifolia HOM05D004811 ORTHO05D006888 2.5e-14 84.3 93 47.3


User provided reference genes

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