Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 9.1e-145 516.9 267 100.0
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.6e-139 498.8 265 97.4
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.1e-121 438.7 236 94.5
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.1e-121 438.7 236 94.5
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 9.1e-121 437.2 236 93.2
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.6e-117 426.4 236 91.5
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 3.6e-117 425.2 236 91.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 1.4e-116 423.3 238 87.4
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 7.3e-102 374.4 236 76.7
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 9.5e-102 374.0 236 77.1
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 8.1e-101 370.9 235 78.3
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.8e-100 369.8 238 76.1
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 5.8e-99 364.8 238 74.4
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.3e-98 363.6 238 73.9
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 6.4e-98 361.3 238 73.9
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 5.1e-95 351.7 244 72.5
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 6.6e-95 351.3 238 69.7
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 1.5e-94 350.1 236 72.9
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 1.5e-94 350.1 238 73.5
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 5.6e-94 348.2 237 70.9
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 9.5e-94 347.4 238 71.4
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 9.5e-94 347.4 236 71.6
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.6e-93 346.7 238 71.8
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 1.6e-93 346.7 246 70.7
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 2.8e-93 345.9 238 70.6
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.6e-93 345.5 238 71.4
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 3.6e-93 345.5 238 72.7
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 3.6e-93 345.5 236 71.6
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 4.7e-93 345.1 238 72.3
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 6.2e-93 344.7 237 71.3
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.8e-92 343.2 238 73.1
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 3.1e-92 342.4 238 68.9
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 8.9e-92 340.9 239 71.5
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 1.2e-91 340.5 238 68.9
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.5e-91 340.1 238 69.3
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.5e-91 340.1 243 69.1
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 2.0e-91 339.7 235 72.3
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 2.0e-91 339.7 238 71.0
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 3.4e-91 339.0 238 69.7
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.4e-91 339.0 238 69.7
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.4e-91 339.0 238 69.7
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.4e-91 339.0 238 69.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.4e-91 338.6 238 69.7
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 4.4e-91 338.6 236 71.2
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 7.6e-91 337.8 236 69.9
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.3e-90 337.0 245 68.2
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-90 337.0 238 69.7
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.9e-90 335.9 238 69.7
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 6.4e-90 334.7 239 70.7
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 8.4e-90 334.3 238 66.4
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.4e-90 334.3 236 68.6
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.4e-90 334.3 236 68.6
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.1e-89 334.0 238 67.6
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.1e-89 334.0 238 66.4
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.6e-88 330.1 245 68.2
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.6e-88 330.1 238 65.1
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 2.1e-88 329.7 238 64.7
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.1e-88 329.7 238 64.7
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 2.1e-88 329.7 239 68.6
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 7.8e-88 327.8 238 67.2
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.7e-87 326.6 238 65.1
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.3e-87 326.2 238 67.2
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 3.9e-87 325.5 238 66.8
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 6.6e-87 324.7 238 64.3
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 8.6e-87 324.3 238 64.7
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 8.6e-87 324.3 242 67.4
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 3.3e-86 322.4 239 66.5
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 7.3e-86 321.2 238 66.4
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.6e-85 320.1 239 69.5
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 2.1e-85 319.7 238 62.2
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.8e-85 319.3 238 62.6
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 4.7e-85 318.5 239 66.5
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 6.2e-85 318.2 228 65.4
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.8e-84 316.6 238 64.3
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.8e-84 316.6 238 62.6
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 4.0e-84 315.5 236 65.7
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 4.0e-84 315.5 236 65.3
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 5.2e-84 315.1 240 62.1
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 5.8e-83 311.6 244 63.1
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.2e-82 309.7 238 63.9
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 2.9e-82 309.3 244 62.3
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 8.4e-82 307.8 239 61.9
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 7.8e-80 301.2 238 65.1
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 6.6e-79 298.1 236 62.7
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 2.1e-77 293.1 210 68.1
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.4e-76 290.4 246 60.6
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 1.4e-76 290.4 240 63.3
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 5.3e-76 288.5 244 62.3
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 4.8e-69 265.4 236 57.2
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 3.1e-68 262.7 231 63.6
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 6.4e-66 255.0 215 61.9
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.3e-63 247.3 172 69.8
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 2.4e-60 236.5 240 53.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 6.9e-60 235.0 240 50.4
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.7e-58 230.3 172 68.6
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 2.2e-58 229.9 234 50.9
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 2.1e-56 223.4 238 49.6
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 5.1e-55 218.8 243 46.5
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.9e-54 216.9 231 52.4
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 7.4e-54 214.9 158 62.7
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 1.3e-47 194.1 129 72.9
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 7.4e-46 188.3 162 58.6
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 4.5e-43 179.1 127 68.5
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 2.4e-36 156.8 229 41.0
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.3e-26 124.4 85 70.6
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.1e-25 121.3 85 69.4
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.3e-21 107.8 246 28.5
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 3.1e-20 103.2 80 61.2
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.5e-17 93.6 56 78.6
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.6e-14 83.6 137 45.3
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 3.4e-14 83.2 87 47.1
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.9e-10 70.1 82 53.7


User provided reference genes

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