Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015757g0020 Nicotiana tabacum HOM05D004341 ORTHO05D005075 7.0e-61 237.3 135 100.0
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 7.3e-58 227.3 135 96.3
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 5.2e-48 194.5 135 83.0
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 3.2e-45 185.3 135 79.3
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 2.5e-42 175.6 135 78.5
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 8.4e-38 160.6 136 72.1
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 1.6e-36 156.4 136 72.1
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 3.0e-35 152.1 136 66.9
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 3.6e-33 145.2 136 69.9
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 1.4e-32 143.3 135 68.1
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 1.4e-32 143.3 135 68.1
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 3.4e-31 138.7 136 66.2
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 9.9e-31 137.1 135 60.7
Oeu020262.1 Olea europaea HOM05D004341 ORTHO05D005075 4.2e-29 131.7 136 64.0
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 5.4e-29 131.3 138 63.8
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 1.2e-28 130.2 136 63.2
PGSC0003DMG400019653 Solanum tuberosum HOM05D004341 ORTHO05D005075 1.1e-26 123.6 135 63.0
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 7.3e-26 120.9 138 62.3
SGA_v2.0_scaffold28G11752 Striga asiatica HOM05D004341 ORTHO05D005075 3.6e-25 118.6 135 54.8
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 3.1e-24 115.5 137 59.9
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 4.0e-24 115.2 135 58.5
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 5.3e-24 114.8 138 61.6
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 9.0e-24 114.0 139 56.8
Cpa.g.c30482 Carica papaya HOM05D004341 ORTHO05D005075 2.6e-23 112.5 139 56.8
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 2.6e-23 112.5 137 59.1
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 3.4e-23 112.1 140 57.1
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 4.5e-23 111.7 136 59.6
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 7.6e-23 110.9 137 59.9
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 7.6e-23 110.9 141 58.2
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 1.3e-22 110.2 136 58.1
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 1.7e-22 109.8 148 54.1
unitig_21.g20916 Utricularia gibba HOM05D004341 ORTHO05D005075 1.7e-22 109.8 137 60.6
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 4.9e-22 108.2 138 54.3
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 6.4e-22 107.8 137 58.4
Lsat_1_v5_gn_3_129240 Lactuca sativa HOM05D004341 ORTHO05D005075 8.4e-22 107.5 136 58.8
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 1.4e-21 106.7 159 50.3
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 3.2e-21 105.5 149 53.0
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 3.2e-21 105.5 148 54.1
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 9.3e-21 104.0 137 56.2
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 9.3e-21 104.0 137 55.5
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 1.2e-20 103.6 136 55.1
CsaV3_3G003450 Cucumis sativus L. HOM05D004341 ORTHO05D005075 1.6e-20 103.2 146 54.8
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 6.0e-20 101.3 146 54.1
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 7.9e-20 100.9 141 56.0
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 1.0e-19 100.5 136 53.7
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 1.3e-19 100.1 153 44.4
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 1.3e-19 100.1 136 55.9
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 1.3e-19 100.1 150 50.7
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.3e-19 99.4 153 49.0
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 3.0e-19 99.0 153 48.4
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 5.1e-19 98.2 163 50.3
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 5.1e-19 98.2 153 51.0
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 8.7e-19 97.4 153 49.7
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 8.7e-19 97.4 153 49.7
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 1.5e-18 96.7 135 53.3
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 2.5e-18 95.9 159 49.7
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 2.5e-18 95.9 159 49.7
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 4.3e-18 95.1 155 49.7
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 4.3e-18 95.1 131 55.0
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 4.3e-18 95.1 131 55.0
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 5.6e-18 94.7 146 52.1
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 5.6e-18 94.7 146 52.1
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 7.4e-18 94.4 141 52.5
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 2.1e-17 92.8 152 52.6
CDE04G3252 Ceratophyllum demersum HOM05D004341 ORTHO05D005075 2.1e-17 92.8 133 54.1
Potri.001G073500 Populus trichocarpa HOM05D004341 ORTHO05D005075 2.8e-17 92.4 150 48.0
PGR083G1473 Punica granatum HOM05D004341 ORTHO05D005075 4.8e-17 91.7 137 54.0
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 8.1e-17 90.9 153 50.3
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 8.1e-17 90.9 135 51.9
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 1.4e-16 90.1 135 52.6
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 1.8e-16 89.7 136 50.7
ATR0737G165 Amborella trichopoda HOM05D004341 ORTHO05D005075 5.3e-16 88.2 135 50.4
THA.LOC104806232 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 5.3e-16 88.2 138 49.3
Solyc05g018120.2 Solanum lycopersicum HOM05D004341 ORTHO05D005075 6.9e-16 87.8 50 90.0
Lj3g0018794 Lotus japonicus HOM05D004341 ORTHO05D005075 1.5e-15 86.7 135 52.6
Aa31LG9G8550 Aethionema arabicum HOM05D004341 ORTHO05D005075 2.0e-15 86.3 136 49.3
Hund11810 Selenicereus undatus HOM05D004341 ORTHO05D005075 2.6e-15 85.9 157 45.9
Prupe.4G121600 Prunus persica HOM05D004341 ORTHO05D005075 3.4e-15 85.5 51 82.4
MD10G1223700 Malus domestica HOM05D004341 ORTHO05D005075 4.5e-15 85.1 148 49.3
Medtr1g047200 Medicago truncatula HOM05D004341 ORTHO05D005075 4.5e-15 85.1 135 51.9
Lj4g0017726 Lotus japonicus HOM05D004341 ORTHO05D005075 1.3e-14 83.6 135 50.4
RcHm_v2.0_Chr5g0022151 Rosa chinensis HOM05D004341 ORTHO05D005075 1.3e-14 83.6 167 43.1
QL11p010678 Quercus lobata HOM05D004341 ORTHO05D005075 2.2e-14 82.8 51 80.4
TPR.G20753 Trifolium pratense HOM05D004341 ORTHO05D005075 2.9e-14 82.4 135 49.6
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 3.8e-14 82.0 137 48.2
Ciclev10016661m.g Citrus clementina HOM05D004341 ORTHO05D005075 4.9e-14 81.6 141 45.4
Lsat_1_v5_gn_1_77761 Lactuca sativa HOM05D004341 ORTHO05D005075 4.9e-14 81.6 50 82.0
AT4G20280 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 8.4e-14 80.9 150 45.3
Aqoxy4G00695 Aquilegia oxysepala HOM05D004341 ORTHO05D005075 1.4e-13 80.1 148 46.6
Rhsim13G0136700 Rhododendron simsii HOM05D004341 ORTHO05D005075 5.5e-13 78.2 50 84.0
SHI16737 Sapria himalayana HOM05D004341 ORTHO05D005075 5.5e-13 78.2 130 50.0
FAN21G2305 Fragaria x ananassa HOM05D004341 ORTHO05D005075 7.1e-13 77.8 153 42.5
Medtr0085s0030 Medicago truncatula HOM05D004341 ORTHO05D005075 9.3e-13 77.4 145 42.8
AL7G33620 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 1.2e-12 77.0 153 45.1
CiPaw.10G108700 Carya illinoinensis HOM05D004341 ORTHO05D005075 1.2e-12 77.0 51 74.5
Zm00001eb156710 Zea mays HOM05D004341 ORTHO05D005075 1.2e-12 77.0 132 50.8
A08p14740 Brassica napus HOM05D004341 ORTHO05D005075 2.1e-12 76.3 136 43.4
BraA08t33460Z Brassica rapa HOM05D004341 ORTHO05D005075 2.1e-12 76.3 136 43.4
FvH4_3g13420 Fragaria vesca HOM05D004341 ORTHO05D005075 2.1e-12 76.3 163 41.1
Cfa001170 Carpinus fangiana HOM05D004341 ORTHO05D005075 2.7e-12 75.9 50 76.0
FAN16G0631 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.7e-12 75.9 157 41.4
Glyma.03G001900 Glycine max HOM05D004341 ORTHO05D005075 4.6e-12 75.1 135 48.1
Solyc05g016715.1 Solanum lycopersicum HOM05D001240 ORTHO05D037679 4.6e-12 75.1 104 54.8
PSO017G7392 Papaver somniferum HOM05D004341 ORTHO05D005075 6.0e-12 74.7 51 74.5
VMungo0331G0448 Vigna mungo HOM05D004341 ORTHO05D005075 1.0e-11 73.9 135 47.4
vmacro03576 Vaccinium macrocarpon HOM05D004341 ORTHO05D005075 2.3e-11 72.8 182 41.8
FAN25G3107 Fragaria x ananassa HOM05D004341 ORTHO05D005075 5.1e-11 71.6 161 40.4
Thhalv10026240m.g Eutrema salsugineum HOM05D004341 ORTHO05D005075 6.7e-11 71.2 141 44.0
Os01g0680400 Oryza sativa ssp. japonica HOM05D004341 ORTHO05D005075 6.7e-11 71.2 144 49.3
PSO210G4911 Papaver somniferum HOM05D004341 ORTHO05D005075 6.7e-11 71.2 51 72.5
CANSAT78G0611 Cannabis sativa HOM05D004341 ORTHO05D005075 8.7e-11 70.9 46 78.3
Phvul.010G058500 Phaseolus vulgaris HOM05D004341 ORTHO05D005075 8.7e-11 70.9 135 46.7
Sc19g0001960 Simmondsia chinensis HOM05D004341 ORTHO05D005075 1.9e-10 69.7 108 50.9
Zm00001eb360430 Zea mays HOM05D004341 ORTHO05D005075 2.5e-10 69.3 131 48.1
Carub.0007s2089 Capsella rubella HOM05D004341 ORTHO05D005075 3.3e-10 68.9 150 43.3
BcaNung03718 Brassica carinata HOM05D004341 ORTHO05D005075 4.3e-10 68.6 51 66.7
TWI63G1746 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 4.3e-10 68.6 106 46.2
CARHR227110 Cardamine hirsuta HOM05D004341 ORTHO05D005075 7.4e-10 67.8 140 43.6
QL08p059659 Quercus lobata HOM05D004341 ORTHO05D005075 1.3e-09 67.0 132 40.9
BcaC09g51324 Brassica carinata HOM05D004341 ORTHO05D005075 1.6e-09 66.6 135 44.4
BolC1t01390H Brassica oleracea HOM05D004341 ORTHO05D005075 1.6e-09 66.6 135 44.4
CiPaw.02G184500 Carya illinoinensis HOM05D004341 ORTHO05D005075 1.6e-09 66.6 133 42.9
C01p14250 Brassica napus HOM05D004341 ORTHO05D005075 2.1e-09 66.2 135 44.4
A01p11990 Brassica napus HOM05D004341 ORTHO05D005075 2.8e-09 65.9 136 44.9
BraA01t01141Z Brassica rapa HOM05D004341 ORTHO05D005075 2.8e-09 65.9 136 44.9
Dinv14194 Davidia involucrata HOM05D004341 ORTHO05D005075 2.4e-08 62.8 109 49.5
Haze_05182 Corylus avellana HOM05D004341 ORTHO05D005075 6.9e-08 61.2 167 37.7
AT1G20000 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 9.0e-08 60.8 137 36.5
THA.LOC104812926 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 1.5e-07 60.1 149 40.3
Cfa001469 Carpinus fangiana HOM05D001719 ORTHO05D007646 2.0e-07 59.7 130 43.1
Sp7g18640 Schrenkiella parvula HOM05D004341 ORTHO05D005075 2.6e-07 59.3 138 40.6
SEGI_17825 Sequoiadendron giganteum HOM05D004341 ORTHO05D005075 5.8e-07 58.2 147 39.5
TPR.G30192 Trifolium pratense HOM05D004341 ORTHO05D005075 7.6e-07 57.8 135 40.7
BcaC01g00664 Brassica carinata HOM05D004341 ORTHO05D005075 1.0e-06 57.4 47 61.7
COL.COLO4_10402 Corchorus olitorius HOM05D004341 ORTHO05D005075 1.3e-06 57.0 141 38.3
AL1G32730 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 2.2e-06 56.2 49 63.3
FAN11G3831 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.2e-06 56.2 34 82.4
DCAR_007769 Daucus carota HOM05D004341 ORTHO05D005075 6.5e-06 54.7 29 96.6


User provided reference genes

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