Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013711g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-87 326.6 160 100.0
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-40 169.9 154 62.3
Nitab4.5_0005642g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.1e-39 165.6 111 75.7
Nitab4.5_0002942g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-37 159.8 101 78.2
Nitab4.5_0000091g0370 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.8e-37 158.7 105 73.3
Nitab4.5_0016697g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-35 153.7 99 73.7
Nitab4.5_0011589g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-35 152.5 101 75.2
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-35 151.8 101 75.2
Nitab4.5_0001899g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.0e-34 149.1 100 74.0
Nitab4.5_0000015g0360 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.8e-29 132.1 153 48.4
Nitab4.5_0002219g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-27 126.7 150 51.3
Nitab4.5_0003349g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-27 125.9 152 47.4
Nitab4.5_0001755g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-26 123.2 99 64.6
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 1.9e-25 119.8 101 63.4
Nitab4.5_0007046g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.2e-24 114.8 67 79.1
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-24 114.8 111 51.4
Nitab4.5_0008074g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.1e-24 114.4 92 66.3
Solyc03g044833.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.1e-23 114.0 101 62.4
Nitab4.5_0014025g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.4e-23 112.8 67 79.1
Nitab4.5_0000119g0230 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-21 106.7 161 41.0
Nitab4.5_0004688g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.5e-20 101.7 90 61.1
Nitab4.5_0005054g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-18 97.1 67 70.1
Nitab4.5_0005624g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-16 90.5 121 45.5
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-16 90.5 94 52.1
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 4.8e-16 88.6 94 48.9
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.0e-15 85.5 110 43.6
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 9.0e-15 84.3 82 52.4
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 1.5e-14 83.6 66 63.6
Sopen09g011030 Solanum pennellii HOM05D002261 ORTHO05D002334 1.5e-14 83.6 96 50.0
PGSC0003DMG400024382 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-14 82.0 66 60.6
Nitab4.5_0000570g0170 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.9e-13 78.6 65 61.5
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.9e-13 78.6 154 36.4
Peaxi162Scf00224g00009 Petunia axillaris HOM05D002261 ORTHO05D002334 4.9e-13 78.6 159 30.8
CAN.G339.20 Capsicum annuum HOM05D002261 ORTHO05D002334 1.9e-12 76.6 113 38.9
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 1.9e-12 76.6 64 57.8
Nitab4.5_0000958g0050 Nicotiana tabacum HOM05D002261 ORTHO05D282623 4.2e-12 75.5 72 56.9
Nitab4.5_0007866g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.5e-12 75.1 101 36.6
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.7e-11 72.8 126 34.1
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.1e-11 71.6 118 33.9
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-10 70.9 160 32.5
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-10 70.9 67 56.7
Nitab4.5_0000600g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-10 70.1 58 62.1
Peaxi162Scf01253g00023 Petunia axillaris HOM05D002261 ORTHO05D002334 3.9e-10 68.9 81 49.4
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.7e-10 68.2 111 36.0
Peaxi162Scf00434g00033 Petunia axillaris HOM05D002261 ORTHO05D002334 6.7e-10 68.2 66 56.1
Peaxi162Scf00345g00126 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-09 67.0 131 34.4
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 1.9e-09 66.6 127 29.9
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.5e-09 66.2 139 29.5
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.3e-09 65.9 145 29.0
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.3e-09 65.5 61 45.9
Peaxi162Scf00558g00118 Petunia axillaris HOM05D002261 ORTHO05D002334 4.3e-09 65.5 125 34.4
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.3e-09 65.5 86 37.2
Solyc01g066612.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.4e-09 64.7 87 37.9
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-08 63.5 100 40.0
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-08 62.8 155 32.9
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-08 62.8 64 51.6
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 4.8e-08 62.0 123 30.9
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.2e-08 61.2 74 47.3
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-07 60.8 62 41.9
Peaxi162Scf00528g00122 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-07 60.8 86 41.9
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.4e-07 59.7 93 38.7
Nitab4.5_0004247g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.1e-07 59.3 84 35.7
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 6.9e-07 58.2 65 43.1
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 1.2e-06 57.4 65 43.1
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-06 55.5 65 41.5
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 5.9e-06 55.1 59 49.2
Nitab4.5_0000941g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-05 54.3 55 43.6


User provided reference genes

Program Settings