Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 3.3e-110 401.7 206 100.0
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 2.4e-84 315.8 194 83.5
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 4.0e-84 315.1 193 83.9
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.2e-83 313.5 187 87.7
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 1.9e-81 306.2 177 88.1
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 1.9e-81 306.2 177 88.1
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 6.5e-74 281.2 177 83.1
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 1.3e-71 273.5 175 80.6
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 2.3e-71 272.7 176 79.5
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 8.7e-71 270.8 176 81.8
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 1.1e-68 263.8 176 78.4
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 5.3e-68 261.5 175 78.9
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 3.4e-67 258.8 178 77.0
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.7e-66 256.5 176 76.7
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.7e-66 256.5 176 76.7
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 3.8e-66 255.4 177 76.8
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 1.9e-65 253.1 176 76.1
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.5e-65 252.7 178 75.3
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 4.2e-65 251.9 179 75.4
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 4.2e-65 251.9 178 74.2
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 4.2e-65 251.9 176 76.1
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 5.5e-65 251.5 182 72.5
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 7.2e-65 251.1 180 76.7
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 7.2e-65 251.1 177 74.6
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 7.2e-65 251.1 177 73.4
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 9.4e-65 250.8 178 74.2
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 1.2e-64 250.4 172 76.7
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 2.7e-64 249.2 178 73.6
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 3.6e-64 248.8 178 74.2
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 4.6e-64 248.4 177 75.1
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 6.1e-64 248.1 178 73.0
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 7.9e-64 247.7 176 76.1
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 6.7e-63 244.6 177 74.0
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 8.8e-63 244.2 178 73.0
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 1.1e-62 243.8 177 73.4
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 1.1e-62 243.8 178 72.5
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 1.1e-62 243.8 153 83.0
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.0e-62 243.0 178 71.3
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 2.0e-62 243.0 164 77.4
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 3.3e-62 242.3 175 74.3
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 5.7e-62 241.5 180 72.8
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 7.4e-62 241.1 167 73.1
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 9.7e-62 240.7 177 75.1
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.7e-61 240.0 179 73.2
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.8e-61 238.4 177 72.3
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 8.2e-61 237.7 177 71.8
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 1.4e-60 236.9 178 70.8
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.4e-60 236.9 178 70.8
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 2.4e-60 236.1 178 70.8
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 6.9e-60 234.6 177 70.1
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 6.9e-60 234.6 168 69.6
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 9.1e-60 234.2 152 80.9
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 1.5e-59 233.4 177 69.5
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 2.0e-59 233.0 164 73.8
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 3.4e-59 232.3 171 71.3
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 7.7e-59 231.1 179 69.3
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 1.0e-58 230.7 180 71.7
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 1.3e-58 230.3 179 70.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 8.5e-58 227.6 177 67.8
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 8.5e-58 227.6 180 68.9
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 1.1e-57 227.3 177 67.2
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 1.1e-57 227.3 175 70.3
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 1.4e-57 226.9 165 73.3
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.9e-57 226.5 179 67.6
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 5.5e-57 224.9 169 70.4
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 5.5e-57 224.9 177 66.7
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 6.1e-56 221.5 152 77.6
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 6.1e-56 221.5 152 77.6
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 7.9e-56 221.1 137 81.8
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 1.0e-55 220.7 174 70.1
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 1.0e-55 220.7 178 69.1
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 1.4e-55 220.3 181 66.9
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 8.8e-55 217.6 147 77.6
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 8.8e-55 217.6 179 67.6
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 1.5e-54 216.9 176 64.2
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 5.7e-54 214.9 176 63.6
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 7.4e-54 214.5 179 65.9
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.3e-53 213.8 164 68.9
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 2.2e-53 213.0 206 60.7
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 3.7e-53 212.2 176 62.5
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 1.4e-52 210.3 176 61.9
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 3.1e-52 209.1 165 66.1
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 4.1e-52 208.8 177 63.3
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 2.0e-51 206.5 237 52.3
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 2.0e-51 206.5 137 75.9
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 2.6e-51 206.1 177 61.6
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 4.5e-51 205.3 180 65.6
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 5.9e-51 204.9 183 61.2
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 5.9e-51 204.9 137 75.9
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 1.3e-50 203.8 138 76.8
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 6.5e-50 201.4 137 77.4
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 5.5e-49 198.4 183 61.2
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 9.4e-49 197.6 139 74.1
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.6e-48 196.8 164 63.4
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.6e-48 196.8 121 79.3
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 4.7e-48 195.3 137 73.0
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 1.0e-47 194.1 175 61.7
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 8.8e-47 191.0 157 66.9
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 5.7e-46 188.3 165 66.7
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 7.5e-46 188.0 141 68.1
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 9.7e-46 187.6 151 64.9
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 2.2e-45 186.4 151 64.2
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 2.8e-45 186.0 151 64.2
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 2.8e-45 186.0 151 64.2
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 1.4e-44 183.7 176 58.0
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 7.7e-43 177.9 106 81.1
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 1.3e-42 177.2 141 66.0
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 2.9e-42 176.0 162 61.1
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 2.1e-40 169.9 113 74.3
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 8.0e-40 167.9 123 69.1
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 4.4e-38 162.2 156 58.3
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 7.5e-38 161.4 142 63.4
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.4e-36 157.1 176 54.5
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 9.1e-36 154.5 165 54.5
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 5.0e-34 148.7 186 49.5
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.9e-33 146.7 176 52.8
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 1.2e-32 144.1 174 51.7
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 7.5e-30 134.8 117 57.3
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 7.5e-30 134.8 136 55.1
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 1.3e-26 124.0 99 61.6
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 1.2e-24 117.5 137 51.1
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 8.0e-24 114.8 104 55.8
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 1.0e-23 114.4 118 54.2
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 3.0e-23 112.8 77 79.2
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 8.9e-23 111.3 122 53.3
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 2.2e-21 106.7 80 68.8
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.5e-17 94.0 85 57.6
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-17 93.6 138 42.8
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 1.2e-14 84.3 81 60.5
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 2.3e-10 70.1 177 29.9
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 2.8e-08 63.2 51 62.7
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 4.7e-08 62.4 127 37.0
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 3.1e-07 59.7 60 58.3
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 5.2e-07 58.9 124 34.7


User provided reference genes

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