Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 5.7e-214 747.3 367 100.0
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 2.6e-203 711.8 367 94.8
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 7.0e-164 580.9 373 76.4
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.2e-163 580.1 376 76.3
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 1.6e-163 579.7 373 76.4
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 1.2e-155 553.5 366 76.0
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.3e-138 496.9 375 65.9
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 1.5e-137 493.4 375 66.4
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 4.5e-134 481.9 327 70.3
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 2.2e-133 479.6 333 70.6
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 2.4e-132 476.1 332 71.1
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 2.7e-131 472.6 341 68.6
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 3.5e-131 472.2 329 69.3
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 1.8e-130 469.9 343 67.3
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 3.9e-130 468.8 362 63.8
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 5.1e-130 468.4 276 80.8
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 5.1e-130 468.4 346 66.8
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 8.7e-130 467.6 326 69.0
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 3.3e-129 465.7 384 62.2
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 3.7e-128 462.2 349 65.6
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 6.2e-128 461.5 326 69.3
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.4e-127 460.3 378 62.7
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 1.4e-127 460.3 340 66.5
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 1.8e-127 459.9 334 67.4
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 5.3e-127 458.4 381 61.7
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 9.0e-127 457.6 383 61.6
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 2.0e-126 456.4 341 66.9
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 4.5e-126 455.3 382 60.7
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.6e-126 454.5 323 68.7
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.6e-126 454.5 323 68.7
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 7.6e-126 454.5 328 68.0
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 9.9e-126 454.1 327 67.0
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 3.8e-125 452.2 315 70.2
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 6.4e-125 451.4 342 66.7
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.1e-124 450.7 342 64.3
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 1.1e-124 450.7 342 64.3
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 1.9e-124 449.9 325 69.8
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 2.4e-124 449.5 342 66.7
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 2.4e-124 449.5 314 70.7
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 3.2e-124 449.1 324 68.8
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 4.2e-124 448.7 339 67.0
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 9.3e-124 447.6 317 69.1
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 1.2e-123 447.2 333 67.3
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.6e-123 446.8 351 65.2
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 4.6e-123 445.3 342 63.7
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 6.0e-123 444.9 346 62.4
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 2.3e-122 443.0 331 66.5
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 2.3e-122 443.0 340 64.7
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.3e-122 443.0 319 69.3
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.0e-122 442.6 314 69.4
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 3.9e-122 442.2 344 64.0
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 5.1e-122 441.8 339 65.2
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 6.7e-122 441.4 364 61.0
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 1.1e-121 440.7 333 65.2
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.5e-121 440.3 333 66.7
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 2.5e-121 439.5 328 66.5
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 3.3e-121 439.1 323 66.6
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 4.3e-121 438.7 355 63.7
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 5.6e-121 438.3 340 66.8
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.6e-121 438.3 318 67.9
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 5.6e-121 438.3 318 66.7
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 9.6e-121 437.6 330 66.4
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 2.1e-120 436.4 339 65.5
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 3.7e-120 435.6 344 63.7
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 8.2e-120 434.5 348 63.2
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.1e-119 434.1 329 63.2
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.4e-119 433.7 339 63.7
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 3.1e-119 432.6 343 63.0
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 3.1e-119 432.6 319 67.4
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 9.0e-119 431.0 336 64.0
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.2e-118 430.6 314 67.5
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.2e-118 430.6 386 57.0
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.4e-118 429.1 323 64.1
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 7.6e-118 427.9 324 64.5
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 7.6e-118 427.9 370 59.2
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 1.7e-117 426.8 345 61.7
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.1e-116 424.1 317 64.4
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.5e-116 422.9 340 62.4
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 3.2e-116 422.5 332 61.7
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 9.3e-116 421.0 311 64.0
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 1.2e-115 420.6 337 58.2
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 1.6e-115 420.2 342 61.1
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 2.1e-115 419.9 360 60.0
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.1e-115 419.9 344 61.9
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 3.0e-114 416.0 314 65.6
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 7.4e-113 411.4 315 64.4
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 7.4e-113 411.4 292 68.8
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 2.1e-112 409.8 277 72.2
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 1.4e-111 407.1 321 63.9
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 1.4e-111 407.1 280 69.6
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.1e-111 406.0 335 59.1
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 9.0e-111 404.4 350 59.7
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 1.2e-110 404.1 294 67.7
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.5e-108 396.4 316 62.0
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 3.2e-108 396.0 349 59.3
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 4.2e-108 395.6 291 67.7
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.6e-107 393.7 310 59.0
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.0e-106 391.0 362 58.3
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.8e-106 390.2 316 61.4
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 8.7e-106 387.9 342 58.5
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 6.3e-104 381.7 327 59.9
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 7.7e-102 374.8 305 62.0
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 5.5e-100 368.6 289 62.3
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 1.4e-95 354.0 318 56.9
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 2.5e-92 343.2 315 55.2
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 6.7e-90 335.1 315 54.0
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 1.2e-86 324.3 340 51.5
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 1.2e-86 324.3 396 47.5
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.2e-85 320.1 339 52.5
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 6.5e-85 318.5 295 53.9
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 9.4e-76 288.1 218 64.2
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 4.4e-73 279.3 220 60.9
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 1.8e-71 273.9 296 48.3
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 1.4e-66 257.7 212 59.0
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 4.4e-65 252.7 224 58.0
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.5e-62 243.0 295 42.0
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 5.0e-61 239.2 285 40.0
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 6.6e-61 238.8 287 45.6
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 4.7e-51 206.1 298 40.9
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 6.0e-46 189.1 130 71.5
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 5.6e-36 156.0 143 49.0
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 1.2e-30 138.3 87 75.9
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 6.0e-30 136.0 90 72.2
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.4e-26 124.8 200 37.5
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.0e-21 108.6 69 65.2
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 2.7e-14 84.0 60 63.3
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 9.0e-10 68.9 82 43.9
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 9.9e-09 65.5 42 66.7
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 3.2e-07 60.5 66 43.9


User provided reference genes

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