Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012835g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.7e-66 255.8 118 100.0
Nitab4.5_0000638g0280 Nicotiana tabacum HOM05D003674 ORTHO05D004226 3.5e-32 141.7 99 69.7
Nitab4.5_0000512g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 8.7e-23 110.5 96 60.4
SHI10399 Sapria himalayana HOM05D003674 ORTHO05D004226 3.0e-15 85.5 99 48.5
Haze_13165 Corylus avellana HOM05D003674 ORTHO05D004226 2.0e-11 72.8 109 44.0
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 2.6e-11 72.4 96 49.0
CAN.G1472.4 Capsicum annuum HOM05D003674 ORTHO05D004226 3.4e-11 72.0 96 42.7
Peaxi162Scf00132g00117 Petunia axillaris HOM05D003674 ORTHO05D004226 4.5e-11 71.6 39 82.1
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 2.2e-10 69.3 96 43.8
Ca_01497_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 4.9e-10 68.2 98 44.9
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 1.1e-09 67.0 107 41.1
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 9.3e-09 63.9 96 43.8
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 1.2e-08 63.5 117 38.5
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 1.6e-08 63.2 96 41.7
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 6.0e-08 61.2 96 40.6
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 6.0e-08 61.2 96 40.6
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 6.0e-08 61.2 117 36.8
Oeu058850.1 Olea europaea HOM05D003674 ORTHO05D004226 7.9e-08 60.8 49 61.2
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 1.3e-07 60.1 96 38.5
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.3e-07 60.1 96 40.6
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 1.3e-07 60.1 96 40.6
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 1.3e-07 60.1 96 38.5
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 1.8e-07 59.7 35 77.1
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 1.8e-07 59.7 35 77.1
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 1.8e-07 59.7 96 39.6
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 1.8e-07 59.7 35 77.1
Manes.13G146400 Manihot esculenta HOM05D003674 ORTHO05D004226 2.3e-07 59.3 96 37.5
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 2.3e-07 59.3 96 37.5
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 2.3e-07 59.3 96 39.6
TAR624G0173 Trochodendron aralioides HOM05D003674 ORTHO05D004226 2.3e-07 59.3 119 36.1
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 3.0e-07 58.9 96 39.6
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 3.0e-07 58.9 96 37.5
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 3.9e-07 58.5 96 39.6
MSTRG.14342 Avicennia marina HOM05D003674 ORTHO05D004226 5.1e-07 58.2 35 74.3
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 5.1e-07 58.2 96 38.5
Migut.H01178 Erythranthe guttata HOM05D003674 ORTHO05D004226 5.1e-07 58.2 35 74.3
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 5.1e-07 58.2 117 34.2
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 5.1e-07 58.2 35 74.3
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 6.7e-07 57.8 119 34.5
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 6.7e-07 57.8 35 74.3
MSTRG.14337 Avicennia marina HOM05D003674 ORTHO05D004226 8.7e-07 57.4 35 74.3
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 8.7e-07 57.4 35 74.3
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 8.7e-07 57.4 46 63.0
Gohir.D02G179566 Gossypium hirsutum HOM05D003674 ORTHO05D004226 8.7e-07 57.4 46 63.0
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 8.7e-07 57.4 46 63.0
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 8.7e-07 57.4 96 36.5
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 8.7e-07 57.4 35 74.3
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 1.1e-06 57.0 47 61.7
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 1.1e-06 57.0 96 37.5
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 1.1e-06 57.0 35 74.3
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 1.1e-06 57.0 35 74.3
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 1.5e-06 56.6 35 71.4
MSTRG.14332 Avicennia marina HOM05D003674 ORTHO05D004226 1.5e-06 56.6 35 71.4
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 1.5e-06 56.6 35 74.3
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 1.5e-06 56.6 97 37.1
CiPaw.04G126200 Carya illinoinensis HOM05D003674 ORTHO05D004226 1.9e-06 56.2 42 66.7
Hma1.2p1_2586F.1_g324940 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 1.9e-06 56.2 35 74.3
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 1.9e-06 56.2 41 68.3
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 1.9e-06 56.2 96 36.5
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 1.9e-06 56.2 96 36.5
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 2.5e-06 55.8 35 74.3
ATR0737G184 Amborella trichopoda HOM05D003674 ORTHO05D004226 2.5e-06 55.8 31 80.6
CDE08G1051 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 2.5e-06 55.8 96 37.5
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 2.5e-06 55.8 35 74.3
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 2.5e-06 55.8 35 74.3
vmacro12305 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 2.5e-06 55.8 35 74.3
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 3.3e-06 55.5 96 37.5
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 3.3e-06 55.5 96 37.5
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 3.3e-06 55.5 107 34.6
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 3.3e-06 55.5 117 35.0
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 3.3e-06 55.5 56 51.8
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 4.3e-06 55.1 96 36.5
Nn1g06549 Nelumbo nucifera HOM05D003674 ORTHO05D004226 4.3e-06 55.1 30 83.3
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 5.6e-06 54.7 35 71.4
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 5.6e-06 54.7 35 71.4
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 5.6e-06 54.7 35 71.4
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 5.6e-06 54.7 35 71.4
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 5.6e-06 54.7 35 71.4
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 5.6e-06 54.7 30 83.3
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 7.4e-06 54.3 30 80.0
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 7.4e-06 54.3 30 80.0
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 7.4e-06 54.3 30 80.0
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 7.4e-06 54.3 30 80.0
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 7.4e-06 54.3 30 80.0
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 7.4e-06 54.3 30 80.0
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 7.4e-06 54.3 46 60.9
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 7.4e-06 54.3 30 80.0
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 9.6e-06 53.9 30 80.0
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 9.6e-06 53.9 41 65.9
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 9.6e-06 53.9 41 65.9
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 9.6e-06 53.9 30 80.0


User provided reference genes

Program Settings