Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012835g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 3.8e-90 334.7 158 100.0
Peaxi162Scf00132g00117 Petunia axillaris HOM05D003674 ORTHO05D004226 2.8e-53 212.2 151 71.5
CAN.G1472.4 Capsicum annuum HOM05D003674 ORTHO05D004226 1.8e-44 183.0 149 63.8
Nitab4.5_0000512g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 3.6e-40 168.7 149 57.7
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 4.7e-40 168.3 149 57.7
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 6.1e-40 167.9 149 57.7
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 3.0e-39 165.6 149 57.0
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 2.0e-38 162.9 149 56.4
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 9.8e-38 160.6 149 55.7
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 4.9e-37 158.3 149 51.0
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 1.4e-36 156.8 149 53.7
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 1.2e-35 153.7 149 53.0
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 3.5e-35 152.1 149 53.0
Oeu058850.1 Olea europaea HOM05D003674 ORTHO05D004226 3.5e-35 152.1 149 53.0
Haze_13165 Corylus avellana HOM05D003674 ORTHO05D004226 5.9e-35 151.4 149 51.7
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 7.7e-35 151.0 149 51.0
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 2.3e-34 149.4 148 52.7
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 2.9e-34 149.1 149 50.3
Rhsim06G0142000 Rhododendron simsii HOM05D003674 ORTHO05D004226 8.6e-34 147.5 149 50.3
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 8.6e-34 147.5 149 51.7
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 1.1e-33 147.1 148 50.7
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 1.1e-33 147.1 149 50.3
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 1.1e-33 147.1 149 51.0
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 1.5e-33 146.7 149 53.0
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 1.9e-33 146.4 149 51.7
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.9e-33 146.4 148 52.0
Oeu010988.1 Olea europaea HOM05D003674 ORTHO05D004226 1.9e-33 146.4 151 50.3
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 2.5e-33 146.0 149 50.3
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 3.3e-33 145.6 149 51.0
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 5.6e-33 144.8 149 49.0
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 7.3e-33 144.4 148 50.0
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 7.3e-33 144.4 149 50.3
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 7.3e-33 144.4 149 49.0
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 7.3e-33 144.4 146 50.0
Oeu017491.1 Olea europaea HOM05D003674 ORTHO05D004226 1.2e-32 143.7 149 51.7
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 1.6e-32 143.3 149 49.0
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 1.6e-32 143.3 149 49.7
Manes.13G146400 Manihot esculenta HOM05D003674 ORTHO05D004226 1.6e-32 143.3 149 50.3
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 1.6e-32 143.3 148 48.6
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 2.1e-32 142.9 149 49.7
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 2.1e-32 142.9 149 50.3
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 2.1e-32 142.9 149 50.3
MSTRG.14342 Avicennia marina HOM05D003674 ORTHO05D004226 2.8e-32 142.5 149 49.7
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 2.8e-32 142.5 149 49.7
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 3.6e-32 142.1 149 49.7
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 3.6e-32 142.1 149 47.7
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 4.7e-32 141.7 148 48.6
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 4.7e-32 141.7 149 49.7
TAR624G0173 Trochodendron aralioides HOM05D003674 ORTHO05D004226 4.7e-32 141.7 149 49.0
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 8.0e-32 141.0 149 49.0
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 1.0e-31 140.6 149 48.3
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 1.4e-31 140.2 148 48.0
CiPaw.04G126100 Carya illinoinensis HOM05D003674 ORTHO05D004226 1.8e-31 139.8 149 47.7
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 1.8e-31 139.8 148 48.0
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 2.3e-31 139.4 149 48.3
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 3.0e-31 139.0 148 49.3
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 3.0e-31 139.0 149 48.3
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 3.0e-31 139.0 148 51.4
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 3.0e-31 139.0 148 51.4
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 4.0e-31 138.7 148 48.6
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 5.2e-31 138.3 148 49.3
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 5.2e-31 138.3 149 49.0
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 5.2e-31 138.3 149 48.3
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 1.2e-30 137.1 147 48.3
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 1.5e-30 136.7 149 47.0
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 1.5e-30 136.7 148 48.6
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 1.5e-30 136.7 149 49.0
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 1.5e-30 136.7 148 48.0
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 2.0e-30 136.3 148 47.3
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 2.0e-30 136.3 148 48.0
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 2.0e-30 136.3 148 48.0
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 2.0e-30 136.3 148 48.0
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 2.0e-30 136.3 148 48.0
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 2.0e-30 136.3 148 48.0
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 2.6e-30 136.0 148 47.3
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 2.6e-30 136.0 148 48.0
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 2.6e-30 136.0 148 47.3
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 2.6e-30 136.0 148 47.3
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 2.6e-30 136.0 148 47.3
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 2.6e-30 136.0 149 47.7
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 3.4e-30 135.6 148 48.0
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 3.4e-30 135.6 148 46.6
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 3.4e-30 135.6 148 46.6
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 3.4e-30 135.6 149 48.3
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 4.4e-30 135.2 149 46.3
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 4.4e-30 135.2 148 46.6
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 5.7e-30 134.8 149 47.0
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 9.8e-30 134.0 148 46.6
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 9.8e-30 134.0 148 46.6
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 9.8e-30 134.0 148 46.6
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 1.3e-29 133.7 147 44.2
MSTRG.14335 Avicennia marina HOM05D003674 ORTHO05D004226 1.7e-29 133.3 152 44.7
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 1.7e-29 133.3 148 48.0
Migut.H01178 Erythranthe guttata HOM05D003674 ORTHO05D004226 2.2e-29 132.9 149 46.3
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 2.2e-29 132.9 149 47.0
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 2.2e-29 132.9 149 47.0
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 2.2e-29 132.9 149 47.0
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 6.4e-29 131.3 148 48.6
Nn1g06550 Nelumbo nucifera HOM05D003674 ORTHO05D004226 8.3e-29 131.0 148 48.0
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 1.4e-28 130.2 148 45.3
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 1.4e-28 130.2 149 43.0
Zm00001eb360320 Zea mays HOM05D003674 ORTHO05D004226 1.4e-28 130.2 151 44.4
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 1.8e-28 129.8 148 45.9
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 1.8e-28 129.8 103 56.3
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 2.4e-28 129.4 149 43.0
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 7.0e-28 127.9 151 44.4
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.7e-27 125.9 145 48.3
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 3.5e-27 125.6 148 45.9
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 1.7e-26 123.2 150 43.3
MSTRG.14332 Avicennia marina HOM05D003674 ORTHO05D004226 3.9e-26 122.1 94 59.6
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 5.0e-26 121.7 149 41.6
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 6.6e-26 121.3 144 44.4
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 6.6e-26 121.3 149 42.3
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 6.6e-26 121.3 150 43.3
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 8.6e-26 120.9 147 41.5
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 1.1e-25 120.6 149 42.3
vmacro12305 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 1.9e-25 119.8 230 34.8
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 3.3e-25 119.0 93 59.1
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 2.8e-24 115.9 146 43.2
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 4.7e-24 115.2 147 40.8
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 6.2e-24 114.8 148 41.9
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 1.0e-23 114.0 93 51.6
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 9.8e-22 107.5 147 40.1
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 9.8e-22 107.5 147 40.1
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 1.4e-20 103.6 149 38.9
Gohir.D02G179566 Gossypium hirsutum HOM05D003674 ORTHO05D004226 6.8e-15 84.7 60 61.7
Lsat_1_v5_gn_4_64281 Lactuca sativa HOM05D003674 ORTHO05D004226 1.5e-14 83.6 55 60.0
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 1.3e-13 80.5 55 56.4
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.2e-11 73.9 112 40.2
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.6e-11 73.6 112 39.3
Ca_01498_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 4.6e-11 72.0 93 44.1
SHI10401 Sapria himalayana HOM05D003674 ORTHO05D004226 1.7e-10 70.1 100 39.0
Pp3c2_10230 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.9e-09 66.6 119 31.9
Hma1.2p1_2586F.1_g324940 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 3.3e-09 65.9 36 75.0
SEGI_04644 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 4.7e-08 62.0 93 36.6
Pp3c14_20770 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.1e-07 60.8 129 28.7
Pp3c1_28370 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.8e-07 60.1 131 29.8
Pp3c18_10190 Physcomitrium patens HOM05D003674 ORTHO05D004226 3.1e-07 59.3 119 27.7
Pp3c19_18680 Physcomitrium patens HOM05D003674 ORTHO05D004226 3.4e-06 55.8 119 26.9
SHI10399 Sapria himalayana HOM05D003674 ORTHO05D004226 9.9e-06 54.3 34 61.8


User provided reference genes

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