Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.6e-99 366.3 212 100.0
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 9.3e-92 340.5 212 91.5
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 1.4e-84 316.6 211 87.2
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 2.8e-80 302.4 212 79.7
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 6.9e-71 271.2 212 73.6
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 4.9e-69 265.0 212 73.1
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 2.7e-67 259.2 212 70.8
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 2.3e-66 256.1 210 73.8
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 3.0e-66 255.8 212 75.5
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 3.0e-66 255.8 212 75.5
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 2.8e-64 249.2 212 70.8
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 4.8e-64 248.4 193 74.1
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 1.8e-63 246.5 212 67.0
PGSC0003DMG400019653 Solanum tuberosum HOM05D004341 ORTHO05D005075 4.1e-63 245.4 212 73.1
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 2.0e-62 243.0 216 71.8
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 4.5e-62 241.9 213 73.2
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 1.7e-61 240.0 215 71.2
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 5.0e-61 238.4 212 68.9
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 6.5e-61 238.0 215 67.0
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 1.4e-60 236.9 215 71.6
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 2.5e-60 236.1 212 67.0
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 3.2e-60 235.7 212 71.2
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 4.2e-60 235.3 218 69.3
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 7.2e-60 234.6 216 66.7
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 1.2e-59 233.8 215 66.0
PGR083G1473 Punica granatum HOM05D004341 ORTHO05D005075 1.6e-59 233.4 213 70.4
SGA_v2.0_scaffold28G11752 Striga asiatica HOM05D004341 ORTHO05D005075 1.6e-59 233.4 214 65.4
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 8.7e-58 227.6 231 65.4
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 1.5e-57 226.9 235 65.5
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 1.9e-57 226.5 224 66.1
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 2.5e-57 226.1 226 62.4
Lsat_1_v5_gn_3_129240 Lactuca sativa HOM05D004341 ORTHO05D005075 2.5e-57 226.1 216 65.3
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 2.5e-57 226.1 226 65.9
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 4.3e-57 225.3 221 64.3
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 4.3e-57 225.3 212 67.5
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 1.6e-56 223.4 221 67.0
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 1.6e-56 223.4 221 67.0
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.2e-56 223.0 232 58.2
unitig_21.g20916 Utricularia gibba HOM05D004341 ORTHO05D005075 2.2e-56 223.0 214 65.9
Solyc05g018120.2 Solanum lycopersicum HOM05D004341 ORTHO05D005075 2.8e-56 222.6 126 89.7
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 4.8e-56 221.9 215 65.6
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 6.3e-56 221.5 213 69.0
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 6.3e-56 221.5 232 61.6
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 6.3e-56 221.5 223 66.4
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 6.3e-56 221.5 217 66.4
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 1.4e-55 220.3 219 67.6
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 1.8e-55 219.9 230 63.5
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 1.8e-55 219.9 230 61.7
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 1.8e-55 219.9 230 61.7
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 1.8e-55 219.9 214 67.3
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 3.1e-55 219.2 232 61.2
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 4.1e-55 218.8 235 63.8
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 4.1e-55 218.8 235 63.8
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 6.9e-55 218.0 212 64.6
Potri.001G073500 Populus trichocarpa HOM05D004341 ORTHO05D005075 2.0e-54 216.5 235 59.6
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 2.0e-54 216.5 208 69.7
Aa31LG9G8550 Aethionema arabicum HOM05D004341 ORTHO05D005075 3.4e-54 215.7 216 62.0
CDE04G3252 Ceratophyllum demersum HOM05D004341 ORTHO05D005075 5.9e-54 214.9 209 65.1
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 5.9e-54 214.9 212 67.0
Aqoxy4G00695 Aquilegia oxysepala HOM05D004341 ORTHO05D005075 7.7e-54 214.5 230 65.2
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 1.7e-53 213.4 213 66.2
THA.LOC104806232 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 1.7e-53 213.4 218 61.5
QL11p010678 Quercus lobata HOM05D004341 ORTHO05D005075 1.1e-52 210.7 126 84.1
Cpa.g.c30482 Carica papaya HOM05D004341 ORTHO05D005075 2.5e-52 209.5 219 60.3
CiPaw.10G108700 Carya illinoinensis HOM05D004341 ORTHO05D005075 2.5e-52 209.5 127 84.3
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 1.2e-51 207.2 212 65.6
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 2.1e-51 206.5 212 59.9
Rhsim13G0136700 Rhododendron simsii HOM05D004341 ORTHO05D005075 2.1e-51 206.5 126 85.7
Hund11810 Selenicereus undatus HOM05D004341 ORTHO05D005075 2.7e-51 206.1 233 57.1
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 7.9e-51 204.5 201 65.7
RcHm_v2.0_Chr5g0022151 Rosa chinensis HOM05D004341 ORTHO05D005075 1.0e-50 204.1 235 58.3
Cfa001170 Carpinus fangiana HOM05D004341 ORTHO05D005075 1.4e-50 203.8 126 81.7
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 1.4e-50 203.8 212 62.3
Lj3g0018794 Lotus japonicus HOM05D004341 ORTHO05D005075 1.4e-50 203.8 212 64.2
Zm00001eb156710 Zea mays HOM05D004341 ORTHO05D005075 1.4e-50 203.8 209 67.0
Os01g0680400 Oryza sativa ssp. japonica HOM05D004341 ORTHO05D005075 2.3e-50 203.0 220 65.5
Prupe.4G121600 Prunus persica HOM05D004341 ORTHO05D005075 2.3e-50 203.0 127 79.5
Ciclev10016661m.g Citrus clementina HOM05D004341 ORTHO05D005075 3.0e-50 202.6 213 57.3
FAN21G2305 Fragaria x ananassa HOM05D004341 ORTHO05D005075 3.0e-50 202.6 229 58.5
vmacro03576 Vaccinium macrocarpon HOM05D004341 ORTHO05D005075 3.0e-50 202.6 255 58.8
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 5.1e-50 201.8 229 58.5
MD10G1223700 Malus domestica HOM05D004341 ORTHO05D005075 6.7e-50 201.4 231 61.0
Medtr1g047200 Medicago truncatula HOM05D004341 ORTHO05D005075 1.5e-49 200.3 212 62.7
FAN16G0631 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.0e-49 199.9 232 57.3
FvH4_3g13420 Fragaria vesca HOM05D004341 ORTHO05D005075 3.3e-49 199.1 235 57.0
CANSAT78G0611 Cannabis sativa HOM05D004341 ORTHO05D005075 5.7e-49 198.4 122 81.1
Lj4g0017726 Lotus japonicus HOM05D004341 ORTHO05D005075 5.7e-49 198.4 213 64.8
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.3e-48 197.2 169 73.4
Zm00001eb360430 Zea mays HOM05D004341 ORTHO05D005075 1.7e-48 196.8 209 67.0
VMungo0331G0448 Vigna mungo HOM05D004341 ORTHO05D005075 8.2e-48 194.5 211 63.0
PSO017G7392 Papaver somniferum HOM05D004341 ORTHO05D005075 1.1e-47 194.1 127 78.0
Glyma.03G001900 Glycine max HOM05D004341 ORTHO05D005075 1.8e-47 193.4 212 63.7
AT4G20280 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 5.3e-47 191.8 215 60.9
Phvul.010G058500 Phaseolus vulgaris HOM05D004341 ORTHO05D005075 9.1e-47 191.0 220 61.8
CARHR227110 Cardamine hirsuta HOM05D004341 ORTHO05D005075 2.6e-46 189.5 223 57.4
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 3.4e-46 189.1 192 68.8
AL7G33620 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 5.9e-46 188.3 220 57.3
PSO210G4911 Papaver somniferum HOM05D004341 ORTHO05D005075 5.9e-46 188.3 124 77.4
Thhalv10026240m.g Eutrema salsugineum HOM05D004341 ORTHO05D005075 1.3e-45 187.2 223 55.2
ATR0737G165 Amborella trichopoda HOM05D004341 ORTHO05D005075 1.7e-45 186.8 212 58.0
Haze_05182 Corylus avellana HOM05D004341 ORTHO05D005075 1.7e-45 186.8 245 55.9
Carub.0007s2089 Capsella rubella HOM05D004341 ORTHO05D005075 3.8e-45 185.7 221 58.4
SHI16737 Sapria himalayana HOM05D004341 ORTHO05D005075 1.1e-44 184.1 200 56.5
BcaC09g51324 Brassica carinata HOM05D004341 ORTHO05D005075 1.9e-44 183.3 216 58.3
A01p11990 Brassica napus HOM05D004341 ORTHO05D005075 3.2e-44 182.6 213 60.1
BraA01t01141Z Brassica rapa HOM05D004341 ORTHO05D005075 4.2e-44 182.2 213 59.6
BcaNung03718 Brassica carinata HOM05D004341 ORTHO05D005075 9.4e-44 181.0 212 59.0
COL.COLO4_10402 Corchorus olitorius HOM05D004341 ORTHO05D005075 9.4e-44 181.0 224 53.1
Sp7g18640 Schrenkiella parvula HOM05D004341 ORTHO05D005075 1.6e-43 180.3 221 55.7
BolC1t01390H Brassica oleracea HOM05D004341 ORTHO05D005075 2.7e-43 179.5 214 57.5
DCAR_007769 Daucus carota HOM05D004341 ORTHO05D005075 2.7e-43 179.5 105 87.6
C01p14250 Brassica napus HOM05D004341 ORTHO05D005075 3.6e-43 179.1 214 59.3
Sc19g0001970 Simmondsia chinensis HOM05D004341 ORTHO05D005075 1.4e-42 177.2 106 86.8
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 5.1e-42 175.3 105 85.7
TPR.G20753 Trifolium pratense HOM05D004341 ORTHO05D005075 5.1e-42 175.3 219 58.0
QL08p059659 Quercus lobata HOM05D004341 ORTHO05D005075 9.7e-41 171.0 207 50.7
AT1G20000 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 2.8e-40 169.5 213 49.8
CiPaw.02G184500 Carya illinoinensis HOM05D004341 ORTHO05D005075 9.1e-39 164.5 206 51.5
THA.LOC104812926 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 7.7e-38 161.4 216 53.7
AL1G32730 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 3.8e-37 159.1 125 67.2
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 2.5e-36 156.4 194 61.3
CBR_g22400 Chara braunii HOM05D004341 ORTHO05D005075 3.2e-36 156.0 126 63.5
Eucgr.G01564 Eucalyptus grandis HOM05D004341 ORTHO05D005075 1.6e-35 153.7 95 76.8
Lsat_1_v5_gn_1_77761 Lactuca sativa HOM05D004341 ORTHO05D005075 3.6e-35 152.5 101 80.2
A08p14740 Brassica napus HOM05D004341 ORTHO05D005075 6.1e-35 151.8 200 49.0
BraA08t33460Z Brassica rapa HOM05D004341 ORTHO05D005075 6.1e-35 151.8 200 49.0
Pp3c14_26520 Physcomitrium patens HOM05D004341 ORTHO05D005075 6.1e-35 151.8 203 51.7
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 4.0e-34 149.1 191 55.0
FAN07G2754 Fragaria x ananassa HOM05D004341 ORTHO05D005075 6.7e-34 148.3 109 72.5
BcaB04g18416 Brassica carinata HOM05D004341 ORTHO05D005075 1.1e-33 147.5 127 62.2
BcaB04g20259 Brassica carinata HOM05D004341 ORTHO05D005075 1.3e-32 144.1 113 67.3
Mapoly0006s0068 Marchantia polymorpha HOM05D004341 ORTHO05D005075 1.3e-32 144.1 125 61.6
BcaB04g20244 Brassica carinata HOM05D004341 ORTHO05D005075 2.2e-32 143.3 215 47.4
FAN25G3107 Fragaria x ananassa HOM05D004341 ORTHO05D005075 3.7e-32 142.5 204 52.5
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 1.1e-31 141.0 170 59.4
Nitab4.5_0015757g0020 Nicotiana tabacum HOM05D004341 ORTHO05D005075 2.4e-31 139.8 136 66.2
BcaC09g49417 Brassica carinata HOM05D004341 ORTHO05D005075 1.3e-29 134.0 133 57.1
BolC1t03652H Brassica oleracea HOM05D004341 ORTHO05D005075 1.3e-29 134.0 214 43.5
TPR.G30192 Trifolium pratense HOM05D004341 ORTHO05D005075 3.2e-28 129.4 127 55.1
Sabra01G0051800 Salix brachista HOM05D004341 ORTHO05D005075 4.2e-28 129.0 115 63.5
Haze_17072 Corylus avellana HOM05D000046 ORTHO05D005075 7.2e-28 128.3 224 47.3
BcaB03g11664 Brassica carinata HOM05D004341 ORTHO05D005075 9.4e-28 127.9 215 51.2
SMO115G0310 Selaginella moellendorffii HOM05D004341 ORTHO05D005075 1.4e-26 124.0 103 58.3
Medtr0085s0030 Medicago truncatula HOM05D004341 ORTHO05D005075 1.2e-25 120.9 173 57.2
Oeu020262.1 Olea europaea HOM05D004341 ORTHO05D005075 3.4e-25 119.4 137 59.9
BcaC01g00664 Brassica carinata HOM05D004341 ORTHO05D005075 4.8e-24 115.5 217 47.0
FAN11G3831 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.2e-21 106.7 82 69.5
CsaV3_3G003450 Cucumis sativus L. HOM05D004341 ORTHO05D005075 6.5e-21 105.1 146 54.1
BcaB04g20257 Brassica carinata HOM05D004341 ORTHO05D005075 4.2e-20 102.4 79 65.8
Cfa001469 Carpinus fangiana HOM05D001719 ORTHO05D007646 3.6e-19 99.4 167 50.3
Potri.003G157450 Populus trichocarpa HOM05D004341 ORTHO05D005075 5.9e-14 82.0 48 77.1
Cre01.g011350 Chlamydomonas reinhardtii HOM05D004341 ORTHO05D005075 6.6e-13 78.6 120 40.8
PRCOL_00001421 Prasinoderma coloniale HOM05D004341 ORTHO05D005075 1.9e-12 77.0 101 39.6
BolC3t20569H Brassica oleracea HOM05D001435 ORTHO05D001304 3.3e-12 76.3 65 58.5
Sc19g0001960 Simmondsia chinensis HOM05D004341 ORTHO05D005075 3.6e-11 72.8 108 60.2
MCO01G288 Micromonas commoda HOM05D004341 ORTHO05D005075 2.0e-09 67.0 93 46.2
Dinv14194 Davidia involucrata HOM05D004341 ORTHO05D005075 1.3e-08 64.3 109 56.9
TPR.G20312 Trifolium pratense HOM05D004341 ORTHO05D005075 1.7e-08 63.9 41 68.3
TPR.G36214 Trifolium pratense HOM05D004341 ORTHO05D005075 1.4e-07 60.8 37 73.0
SEGI_17825 Sequoiadendron giganteum HOM05D004341 ORTHO05D005075 1.8e-07 60.5 147 42.9
Solyc05g016715.1 Solanum lycopersicum HOM05D001240 ORTHO05D037679 2.4e-07 60.1 105 55.2
TWI63G1746 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 1.2e-06 57.8 110 45.5
BcaB03g11666 Brassica carinata HOM05D004341 ORTHO05D005075 4.6e-06 55.8 45 64.4


User provided reference genes

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