Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.0e-256 888.6 462 100.0
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.7e-239 832.4 464 93.8
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 9.9e-232 806.6 462 90.5
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.3e-228 796.2 463 90.5
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.6e-226 789.3 463 89.6
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 6.2e-226 787.3 467 88.9
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 5.5e-214 747.7 420 90.5
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.8e-212 742.7 464 81.7
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.3e-212 742.3 468 79.7
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 3.9e-212 741.5 468 83.1
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.1e-211 740.0 468 83.1
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.9e-211 739.2 468 82.9
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 7.4e-211 737.3 468 81.8
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.1e-209 733.4 462 81.0
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 4.5e-208 728.0 462 78.1
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 7.7e-208 727.2 481 77.5
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 3.8e-207 724.9 470 79.8
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.1e-206 723.4 465 82.2
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 3.6e-205 718.4 468 78.0
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 2.3e-204 715.7 462 79.0
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.5e-203 712.2 465 81.7
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 3.3e-203 711.8 462 76.4
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 5.7e-203 711.1 462 76.8
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 2.8e-202 708.8 462 77.3
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 6.3e-202 707.6 462 78.8
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 2.4e-201 705.7 462 77.1
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.2e-200 703.4 464 77.8
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 2.0e-200 702.6 462 75.8
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 8.5e-199 697.2 462 75.5
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.1e-198 696.8 462 74.9
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.5e-198 695.7 462 75.3
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 3.2e-198 695.3 462 75.1
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 5.5e-198 694.5 469 77.0
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 2.1e-197 692.6 467 76.0
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.0e-196 690.3 462 75.3
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 1.0e-196 690.3 462 76.8
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 1.8e-196 689.5 462 77.3
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.3e-196 689.1 462 74.0
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.5e-195 686.4 469 75.9
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 2.0e-195 686.0 462 76.4
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 2.6e-195 685.6 466 76.0
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.6e-195 685.6 463 77.3
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 3.3e-195 685.3 466 74.9
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 5.7e-195 684.5 466 74.7
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 1.7e-194 682.9 457 75.7
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.8e-194 682.2 470 74.7
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 3.7e-194 681.8 462 73.2
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.1e-193 680.2 462 76.6
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.8e-193 679.5 462 72.5
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 4.1e-193 678.3 462 76.4
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 7.0e-193 677.6 462 76.4
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 9.1e-193 677.2 462 73.8
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 3.5e-192 675.2 462 76.2
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 1.0e-191 673.7 462 73.4
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 2.2e-191 672.5 464 75.6
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.8e-191 671.8 462 75.5
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 3.8e-191 671.8 462 74.5
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 6.5e-191 671.0 462 72.5
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 8.5e-191 670.6 462 73.2
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.1e-190 670.2 489 71.8
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 3.2e-190 668.7 416 79.3
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.2e-190 668.3 462 71.6
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 1.6e-189 666.4 462 72.9
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 2.1e-189 666.0 509 68.2
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.7e-189 665.6 460 73.7
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 8.8e-188 660.6 442 76.9
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.1e-187 660.2 427 77.3
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.4e-187 658.3 465 72.9
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 7.5e-187 657.5 427 76.8
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 7.5e-187 657.5 468 70.5
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 7.5e-187 657.5 494 69.6
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 9.7e-187 657.1 464 72.4
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 2.2e-186 656.0 465 74.4
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 4.8e-186 654.8 462 72.7
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 6.3e-186 654.4 465 74.2
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 8.2e-186 654.1 469 72.1
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 3.1e-185 652.1 421 75.8
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.1e-185 652.1 462 71.0
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 1.2e-184 650.2 467 72.4
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 1.6e-184 649.8 460 70.9
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 3.5e-184 648.7 464 72.0
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 3.5e-184 648.7 464 72.0
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 3.5e-184 648.7 464 72.0
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 4.5e-184 648.3 463 71.3
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.0e-183 647.1 463 71.1
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.2e-183 646.0 464 70.9
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 5.0e-183 644.8 464 70.9
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.1e-182 643.7 464 70.5
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.9e-182 642.9 464 70.5
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 1.2e-181 640.2 465 71.6
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.1e-181 639.4 465 71.8
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 2.7e-181 639.0 465 71.4
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 4.7e-181 638.3 464 71.8
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 5.2e-180 634.8 401 77.1
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 6.8e-180 634.4 420 75.0
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 4.4e-179 631.7 464 70.0
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 5.7e-179 631.3 464 69.4
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 5.7e-179 631.3 468 70.1
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 7.5e-179 630.9 489 68.5
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 2.2e-178 629.4 464 69.8
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 8.3e-178 627.5 456 70.6
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 5.4e-177 624.8 465 71.4
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 5.4e-177 624.8 399 75.4
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 3.8e-175 618.6 448 68.8
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.6e-173 613.2 462 69.0
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 4.5e-168 595.1 464 66.4
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.3e-167 593.6 415 72.0
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 1.5e-166 590.1 460 65.2
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.7e-162 575.5 399 72.2
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 7.8e-160 567.8 420 64.8
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.1e-145 520.8 318 79.6
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.7e-143 513.5 382 71.2
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 3.5e-136 489.2 399 59.1
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 7.3e-134 481.5 411 58.9
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 8.7e-127 458.0 402 54.5
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 7.1e-121 438.3 462 51.3
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 7.1e-105 385.2 417 50.8
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 3.0e-103 379.8 259 76.8
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 5.9e-99 365.5 290 61.0
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 8.7e-95 351.7 535 37.9
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 7.7e-75 285.4 188 73.9
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 2.7e-72 276.9 266 59.4
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 4.0e-63 246.5 256 53.1
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 5.2e-63 246.1 256 53.1
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 3.7e-53 213.4 207 57.5
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.3e-42 178.3 120 78.3
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 6.6e-42 176.0 146 64.4
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 6.6e-42 176.0 161 63.4
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.6e-40 171.4 145 62.8
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 3.5e-35 153.7 123 65.0
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 6.8e-23 112.8 60 90.0
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.9e-17 94.7 57 82.5
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 4.0e-15 87.0 69 69.6
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 7.6e-14 82.8 59 66.1
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.2e-11 75.5 65 69.2


User provided reference genes

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