Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011661g0010 Nicotiana tabacum HOM05D002267 ORTHO05D005902 6.6e-290 1000.0 495 100.0
Nitab4.5_0002077g0130 Nicotiana tabacum HOM05D002267 ORTHO05D005902 6.6e-282 973.4 510 95.3
PGSC0003DMG400003469 Solanum tuberosum HOM05D002267 ORTHO05D005902 4.7e-280 967.2 495 96.4
Solyc06g005370.3 Solanum lycopersicum HOM05D002267 ORTHO05D005902 2.3e-279 964.9 495 96.0
Sopen06g001330 Solanum pennellii HOM05D002267 ORTHO05D005902 4.4e-278 960.7 495 96.0
CAN.G185.18 Capsicum annuum HOM05D002267 ORTHO05D005902 4.6e-275 950.7 495 95.2
Peaxi162Scf00465g00103 Petunia axillaris HOM05D002267 ORTHO05D005902 8.6e-274 946.4 506 92.7
Ciclev10011558m.g Citrus clementina HOM05D002267 ORTHO05D005902 1.9e-252 875.5 489 86.5
DCAR_007527 Daucus carota HOM05D002267 ORTHO05D005902 2.4e-252 875.2 497 85.7
Actinidia36296 Actinidia chinensis HOM05D002267 ORTHO05D005902 4.2e-252 874.4 494 85.6
Haze_14088 Corylus avellana HOM05D002267 ORTHO05D005902 1.6e-251 872.5 491 85.3
QL02p053833 Quercus lobata HOM05D002267 ORTHO05D005902 1.0e-250 869.8 489 85.5
Cfa007986 Carpinus fangiana HOM05D002267 ORTHO05D005902 3.0e-250 868.2 491 85.3
ClCG11G005190 Citrullus lanatus HOM05D002267 ORTHO05D005902 3.9e-250 867.8 497 84.9
Cpa.g.sc652.3 Carica papaya HOM05D002267 ORTHO05D005902 1.9e-249 865.5 492 85.0
Dinv34871 Davidia involucrata HOM05D002267 ORTHO05D005902 5.6e-249 864.0 492 85.8
Aqoxy3G03816 Aquilegia oxysepala HOM05D002267 ORTHO05D005902 1.3e-248 862.8 492 84.1
Thecc.07G119800 Theobroma cacao HOM05D002267 ORTHO05D005902 1.6e-248 862.4 492 85.2
Cc03_g12570 Coffea canephora HOM05D002267 ORTHO05D005902 2.1e-248 862.1 496 85.7
FvH4_6g45710 Fragaria vesca HOM05D002267 ORTHO05D005902 2.8e-248 861.7 495 84.2
vmacro05590 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 2.8e-248 861.7 493 85.6
Sed0022523 Sechium edule HOM05D002267 ORTHO05D005902 3.6e-248 861.3 497 84.1
CiPaw.04G004900 Carya illinoinensis HOM05D002267 ORTHO05D005902 4.8e-248 860.9 492 84.6
Oeu049334.1 Olea europaea HOM05D002267 ORTHO05D005902 4.8e-248 860.9 498 84.5
Hund16106 Selenicereus undatus HOM05D002267 ORTHO05D005902 4.8e-248 860.9 493 85.6
CANSAT64G2636 Cannabis sativa HOM05D002267 ORTHO05D005902 1.1e-247 859.8 496 85.3
COL.COLO4_17522 Corchorus olitorius HOM05D002267 ORTHO05D005902 1.1e-247 859.8 484 86.2
CsaV3_5G038940 Cucumis sativus L. HOM05D002267 ORTHO05D005902 1.8e-247 859.0 493 84.4
MD17G1071600 Malus domestica HOM05D002267 ORTHO05D005902 2.4e-247 858.6 496 84.3
FAN14G5533 Fragaria x ananassa HOM05D002267 ORTHO05D005902 3.1e-247 858.2 495 83.8
Lj2A1079T37 Lonicera japonica HOM05D002267 ORTHO05D005902 9.0e-247 856.7 493 84.6
Duzib213G0616 Durio zibethinus HOM05D002267 ORTHO05D005902 1.2e-246 856.3 491 84.9
FAN09G4431 Fragaria x ananassa HOM05D002267 ORTHO05D005902 5.8e-246 854.0 495 83.8
Gohir.D13G154300 Gossypium hirsutum HOM05D002267 ORTHO05D005902 5.8e-246 854.0 491 84.1
AUR62014559 Chenopodium quinoa HOM05D002267 ORTHO05D005902 1.3e-245 852.8 493 83.6
Potri.017G109500 Populus trichocarpa HOM05D002267 ORTHO05D005902 1.3e-245 852.8 496 83.7
MSTRG.15422 Avicennia marina HOM05D002267 ORTHO05D005902 1.7e-245 852.4 494 84.4
Gorai.013G174300 Gossypium raimondii HOM05D002267 ORTHO05D005902 1.7e-245 852.4 491 84.1
TAR629G0265 Trochodendron aralioides HOM05D002267 ORTHO05D005902 1.7e-245 852.4 496 83.9
FAN26G1557 Fragaria x ananassa HOM05D002267 ORTHO05D005902 3.8e-245 851.3 495 83.2
Gohir.A13G150000 Gossypium hirsutum HOM05D002267 ORTHO05D005902 4.9e-245 850.9 491 84.1
Manes.02G064400 Manihot esculenta HOM05D002267 ORTHO05D005902 4.9e-245 850.9 491 83.5
SalBow1G1113 Salvia bowleyana HOM05D002267 ORTHO05D005902 8.4e-245 850.1 493 84.0
Eucgr.J01450 Eucalyptus grandis HOM05D002267 ORTHO05D005902 1.4e-244 849.4 496 83.3
AUR62008939 Chenopodium quinoa HOM05D002267 ORTHO05D005902 4.2e-244 847.8 493 83.0
Gorai.002G053200 Gossypium raimondii HOM05D002267 ORTHO05D005902 4.2e-244 847.8 491 84.5
Atru.chr1.1114 Acer truncatum HOM05D002267 ORTHO05D005902 7.1e-244 847.0 492 84.1
PGR042G2823 Punica granatum HOM05D002267 ORTHO05D005902 1.2e-243 846.3 493 83.6
RcHm_v2.0_Chr2g0163861 Rosa chinensis HOM05D002267 ORTHO05D005902 1.6e-243 845.9 491 83.3
MELO3C022075.2 Cucumis melo HOM05D002267 ORTHO05D005902 4.6e-243 844.3 487 83.6
FAN23G1730 Fragaria x ananassa HOM05D002267 ORTHO05D005902 4.6e-243 844.3 495 82.8
Gohir.D01G042400 Gossypium hirsutum HOM05D002267 ORTHO05D005902 6.0e-243 844.0 491 84.1
Potri.004G106200 Populus trichocarpa HOM05D002267 ORTHO05D005902 1.3e-242 842.8 496 83.1
Hund16105 Selenicereus undatus HOM05D002267 ORTHO05D005902 2.3e-242 842.0 531 79.8
TWI34G0765 Tripterygium wilfordii HOM05D002267 ORTHO05D005902 2.3e-242 842.0 492 83.5
Gohir.A01G052800 Gossypium hirsutum HOM05D002267 ORTHO05D005902 3.0e-242 841.6 491 83.7
EL10Ac2g04655 Beta vulgaris HOM05D002267 ORTHO05D005902 6.7e-242 840.5 494 83.2
Lalb_Chr04g0258191 Lupinus albus HOM05D002267 ORTHO05D005902 1.1e-241 839.7 494 83.2
Lalb_Chr17g0336641 Lupinus albus HOM05D002267 ORTHO05D005902 1.1e-241 839.7 494 82.8
Lsat_1_v5_gn_2_86320 Lactuca sativa HOM05D002267 ORTHO05D005902 1.5e-241 839.3 498 82.5
arahy.Tifrunner.gnm1.ann1.D1YG1E Arachis hypogaea HOM05D002267 ORTHO05D005902 3.3e-241 838.2 493 82.6
HanXRQChr17g0559871 Helianthus annuus HOM05D002267 ORTHO05D005902 5.6e-241 837.4 493 82.6
PSO675G5323 Papaver somniferum HOM05D002267 ORTHO05D005902 9.6e-241 836.6 495 82.0
PSO541G0287 Papaver somniferum HOM05D002267 ORTHO05D005902 6.2e-240 833.9 495 81.8
Medtr7g019260 Medicago truncatula HOM05D002267 ORTHO05D005902 8.1e-240 833.6 487 84.2
arahy.Tifrunner.gnm1.ann1.Y9SFAF Arachis hypogaea HOM05D002267 ORTHO05D005902 1.1e-239 833.2 493 81.7
Ca_06721_v3 Cicer arietinum L. HOM05D002267 ORTHO05D005902 2.4e-239 832.0 488 83.8
Lj1g0004668 Lotus japonicus HOM05D002267 ORTHO05D005902 3.1e-239 831.6 494 82.6
Sabra04G0076200 Salix brachista HOM05D002267 ORTHO05D005902 9.0e-239 830.1 530 77.9
Glyma.18G279400 Glycine max HOM05D002267 ORTHO05D005902 2.0e-238 828.9 494 81.8
ECA238G0812 Erigeron canadensis HOM05D002267 ORTHO05D005902 2.6e-238 828.6 479 83.7
Psat3g192200 Pisum sativum HOM05D002267 ORTHO05D005902 4.9e-237 824.3 487 83.4
SGA_v2.0_scaffold62G21549 Striga asiatica HOM05D002267 ORTHO05D005902 6.4e-237 823.9 496 80.8
Ah.10g037400 Amaranthus hybridus HOM05D002267 ORTHO05D005902 1.4e-236 822.8 473 84.4
A06p39620 Brassica napus HOM05D002267 ORTHO05D005902 1.4e-236 822.8 495 81.8
Migut.K00870 Erythranthe guttata HOM05D002267 ORTHO05D005902 1.9e-236 822.4 492 81.9
MBI14_g41042_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 1.9e-236 822.4 497 81.3
BraA06t26877Z Brassica rapa HOM05D002267 ORTHO05D005902 2.4e-236 822.0 495 81.8
VMungo1383G0144 Vigna mungo HOM05D002267 ORTHO05D005902 2.7e-235 818.5 493 80.7
Sc14g0003340 Simmondsia chinensis HOM05D002267 ORTHO05D005902 4.6e-235 817.8 495 80.0
Carub.0006s2794 Capsella rubella HOM05D002267 ORTHO05D005902 6.0e-235 817.4 495 79.8
CARHR260400 Cardamine hirsuta HOM05D002267 ORTHO05D005902 7.9e-235 817.0 493 79.7
AL6G43080 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 5.1e-234 814.3 495 79.6
BcaB07g30054 Brassica carinata HOM05D002267 ORTHO05D005902 8.7e-234 813.5 489 80.2
C07p38670 Brassica napus HOM05D002267 ORTHO05D005902 1.1e-233 813.1 489 81.8
BcaC06g33731 Brassica carinata HOM05D002267 ORTHO05D005902 1.5e-233 812.8 487 81.7
BolC7t44387H Brassica oleracea HOM05D002267 ORTHO05D005902 1.5e-233 812.8 489 81.6
Aa31LG2G3660 Aethionema arabicum HOM05D002267 ORTHO05D005902 3.3e-233 811.6 496 79.2
Phvul.008G021600 Phaseolus vulgaris HOM05D002267 ORTHO05D005902 1.3e-232 809.7 493 79.9
AT3G30841 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 2.1e-232 808.9 491 80.0
A02p37120 Brassica napus HOM05D002267 ORTHO05D005902 2.1e-232 808.9 488 79.5
Thhalv10004074m.g Eutrema salsugineum HOM05D002267 ORTHO05D005902 2.1e-232 808.9 489 80.6
AL5G20480 Arabidopsis lyrata HOM05D002267 ORTHO05D005902 1.8e-231 805.8 488 79.7
AT4G09520 Arabidopsis thaliana HOM05D002267 ORTHO05D005902 6.9e-231 803.9 493 78.7
BolC2t11669H Brassica oleracea HOM05D002267 ORTHO05D005902 6.9e-231 803.9 486 79.2
ATR0824G083 Amborella trichopoda HOM05D002267 ORTHO05D005902 2.6e-230 802.0 484 81.4
BraA02t08698Z Brassica rapa HOM05D002267 ORTHO05D005902 3.4e-230 801.6 496 78.2
THA.LOC104805546 Tarenaya hassleriana HOM05D002267 ORTHO05D005902 2.2e-229 798.9 494 78.9
C02p56120 Brassica napus HOM05D002267 ORTHO05D005902 1.4e-228 796.2 488 78.7
HPP92_013287 Vanilla planifolia HOM05D002267 ORTHO05D005902 4.2e-228 794.7 494 79.6
FvH4_5g30870 Fragaria vesca HOM05D002267 ORTHO05D005902 7.6e-222 773.9 443 84.4
CDE04G2341 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 8.5e-221 770.4 491 77.0
CDE02G3890 Ceratophyllum demersum HOM05D002267 ORTHO05D005902 2.5e-220 768.8 488 77.3
Dinv33904 Davidia involucrata HOM05D002267 ORTHO05D005902 7.9e-219 763.8 436 85.1
BcaB07g30055 Brassica carinata HOM05D002267 ORTHO05D005902 1.0e-218 763.5 437 83.1
Zm00001eb137710 Zea mays HOM05D002267 ORTHO05D005902 1.3e-216 756.5 513 73.5
SEGI_04709 Sequoiadendron giganteum HOM05D002267 ORTHO05D005902 4.8e-216 754.6 492 76.4
HanXRQChr07g0200151 Helianthus annuus HOM05D002267 ORTHO05D005902 2.6e-214 748.8 441 82.1
GSVIVG01008609001 Vitis vinifera HOM05D002267 ORTHO05D005902 6.5e-213 744.2 443 82.6
Sp2g18250 Schrenkiella parvula HOM05D002267 ORTHO05D005902 6.7e-210 734.2 444 79.5
Mapoly0028s0072 Marchantia polymorpha HOM05D002267 ORTHO05D005902 1.7e-205 719.5 488 72.5
Os12g0536000 Oryza sativa ssp. japonica HOM05D002267 ORTHO05D005902 2.2e-205 719.2 439 79.7
SMO239G0110 Selaginella moellendorffii HOM05D002267 ORTHO05D005902 5.7e-201 704.5 485 72.6
TPR.G3251 Trifolium pratense HOM05D002267 ORTHO05D005902 4.8e-200 701.4 383 89.0
Pp3c1_4540 Physcomitrium patens HOM05D002267 ORTHO05D005902 1.6e-198 696.4 487 69.6
MBI14_g39140_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 2.7e-190 669.1 491 70.3
unitig_748.g7015 Utricularia gibba HOM05D002267 ORTHO05D005902 2.7e-190 669.1 404 80.0
Nn4g23627 Nelumbo nucifera HOM05D002267 ORTHO05D005902 8.8e-186 654.1 493 68.0
MBI14_g13654_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 2.2e-184 649.4 471 71.5
CSS0025473 Camellia sinensis var. sinensis HOM05D002267 ORTHO05D005902 1.4e-183 646.7 381 82.4
FAN05G0821 Fragaria x ananassa HOM05D002267 ORTHO05D005902 3.8e-181 638.6 385 81.0
CBR_g48938 Chara braunii HOM05D002267 ORTHO05D005902 2.8e-179 632.5 506 62.8
RcHm_v2.0_Chr5g0053071 Rosa chinensis HOM05D002267 ORTHO05D005902 3.1e-175 619.0 386 79.8
Psat0s4662g0040 Pisum sativum HOM05D002267 ORTHO05D005902 7.0e-175 617.8 493 66.3
vmacro23424 Vaccinium macrocarpon HOM05D002267 ORTHO05D005902 5.6e-164 581.6 461 68.1
Prupe.3G243300 Prunus persica HOM05D002267 ORTHO05D005902 7.3e-164 581.3 348 81.3
Sabra17G0091700 Salix brachista HOM05D002267 ORTHO05D008106 2.9e-160 569.3 382 74.1
Cre12.g527400 Chlamydomonas reinhardtii HOM05D002267 ORTHO05D005902 6.8e-146 521.5 528 50.9
FAN18G0049 Fragaria x ananassa HOM05D002267 ORTHO05D005902 1.8e-138 496.9 266 89.8
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 3.1e-122 443.0 600 44.0
HanXRQChr03g0070911 Helianthus annuus HOM05D002267 ORTHO05D005902 2.0e-121 440.3 245 86.5
Zm00001eb410550 Zea mays HOM05D002267 ORTHO05D005902 5.3e-114 415.6 255 79.2
FAN13G3322 Fragaria x ananassa HOM05D002267 ORTHO05D005902 5.8e-113 412.1 228 87.7
HanXRQChr03g0070931 Helianthus annuus HOM05D002267 ORTHO05D005902 5.1e-109 399.1 301 68.1
MBI14_g42567_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D005902 1.1e-106 391.3 482 48.1
AagrBONN_evm.TU.Sc2ySwM_362.1960 Anthoceros agrestis HOM05D002267 ORTHO05D005902 1.4e-106 391.0 434 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1779 Anthoceros agrestis HOM05D002267 ORTHO05D005902 9.0e-106 388.3 238 76.9
BcaC03g17613 Brassica carinata HOM05D002267 ORTHO05D005902 8.8e-101 371.7 251 70.1
MD09G1080600 Malus domestica HOM05D002267 ORTHO05D005902 1.5e-100 370.9 303 68.0
HPP92_013297 Vanilla planifolia HOM05D002267 ORTHO05D005902 6.1e-94 349.0 237 73.8
FAN02G0256 Fragaria x ananassa HOM05D002267 ORTHO05D005902 7.9e-94 348.6 312 60.6
SHI33593 Sapria himalayana HOM05D002267 ORTHO05D005902 3.2e-87 326.6 240 67.5
Duzib177G0042 Durio zibethinus HOM05D002267 ORTHO05D005902 1.7e-80 304.3 249 65.9
TPR.G11470 Trifolium pratense HOM05D002267 ORTHO05D005902 6.8e-61 239.2 159 73.0
TAR374G1196 Trochodendron aralioides HOM05D002267 ORTHO05D005902 5.4e-58 229.6 260 51.2
Oeu025125.1 Olea europaea HOM05D002267 ORTHO05D005902 2.5e-55 220.7 150 73.3
BcaC06g30839 Brassica carinata HOM05D002267 ORTHO05D005902 6.4e-51 206.1 297 43.4
HanXRQChr17g0560661 Helianthus annuus HOM05D002267 ORTHO05D027489 1.3e-48 198.4 103 91.3
BcaB07g30056 Brassica carinata HOM05D002267 ORTHO05D027489 5.2e-45 186.4 96 90.6
HPP92_013296 Vanilla planifolia HOM05D002267 ORTHO05D005902 6.8e-45 186.0 151 66.2
MBI14_g30826_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D027489 9.8e-44 182.2 104 85.6
CARHR060050 Cardamine hirsuta HOM05D002267 ORTHO05D005902 6.0e-41 172.9 146 57.5
MD09G1080700 Malus domestica HOM05D002267 ORTHO05D005902 6.0e-41 172.9 108 75.0
Sed0003994 Sechium edule HOM05D002267 ORTHO05D007330 3.6e-38 163.7 147 57.8
MBI14_g13653_MAGBIO Magnolia biondii HOM05D002267 ORTHO05D035901 4.3e-31 140.2 161 47.8
GSVIVG01036480001 Vitis vinifera HOM05D002267 ORTHO05D005902 4.3e-31 140.2 75 86.7
Duzib168G0178 Durio zibethinus HOM05D002267 ORTHO05D029252 6.2e-30 136.3 79 78.5
Glyma.20G047400 Glycine max HOM05D002267 ORTHO05D029252 8.4e-27 125.9 85 70.6
Glyma.04G110800 Glycine max HOM05D002267 ORTHO05D029252 1.6e-17 95.1 93 53.8
CAN.G464.25 Capsicum annuum HOM05D002267 ORTHO05D020089 6.6e-16 89.7 61 77.0
FAN18G1196 Fragaria x ananassa HOM05D002267 ORTHO05D035901 1.5e-15 88.6 74 59.5
BcaB04g17555 Brassica carinata HOM05D002267 ORTHO05D092878 2.4e-10 71.2 51 68.6
Glyma.U031218 Glycine max HOM05D002267 ORTHO05D029252 2.4e-10 71.2 36 86.1
RcHm_v2.0_Chr5g0053081 Rosa chinensis HOM05D002267 ORTHO05D035901 6.7e-08 63.2 51 58.8
Nn5g27547 Nelumbo nucifera HOM05D002267 ORTHO05D027489 1.1e-07 62.4 30 86.7
MELO3C034926.2 Cucumis melo HOM05D002267 ORTHO05D001928 6.2e-06 56.6 38 73.7


User provided reference genes

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