Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-103 379.8 187 100.0
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.5e-73 277.7 255 61.6
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.0e-49 198.4 251 44.6
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.3e-46 189.5 251 43.4
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 6.8e-46 188.0 255 43.9
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.0e-41 171.8 186 50.0
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 2.3e-38 162.9 223 43.9
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.4e-35 151.8 89 88.8
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.9e-32 143.3 213 40.8
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.3e-32 141.4 95 67.4
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 6.2e-31 138.3 132 53.8
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.3e-30 136.3 186 43.5
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-29 133.7 92 66.3
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.6e-29 132.9 95 67.4
PGSC0003DMG400022355 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.6e-29 132.9 190 44.2
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-28 129.8 178 39.9
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 2.0e-26 123.2 209 38.3
Nitab4.5_0014025g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-25 120.9 228 32.5
Nitab4.5_0005791g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.0e-25 119.4 195 39.5
Sopen03g011240 Solanum pennellii HOM05D002538 ORTHO05D002334 3.0e-25 119.4 185 40.0
Nitab4.5_0016697g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-24 117.5 186 35.5
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-24 115.9 222 36.0
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 3.3e-24 115.9 246 30.5
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 7.3e-24 114.8 187 37.4
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 9.5e-24 114.4 211 33.6
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.6e-23 113.6 238 31.5
Peaxi162Scf00558g00118 Petunia axillaris HOM05D002261 ORTHO05D002334 2.8e-23 112.8 217 35.9
CAN.G15.23 Capsicum annuum HOM05D002261 ORTHO05D002334 7.5e-21 104.8 87 58.6
Nitab4.5_0000015g0360 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-21 104.4 181 37.6
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.8e-21 104.4 89 51.7
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.3e-20 104.0 91 58.2
Nitab4.5_0000941g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.9e-20 102.8 177 31.6
Peaxi162Scf00752g00055 Petunia axillaris HOM05D002261 ORTHO05D002334 3.7e-20 102.4 91 57.1
Peaxi162Scf00752g00068 Petunia axillaris HOM05D002261 ORTHO05D002334 8.3e-20 101.3 91 56.0
CAN.G933.9 Capsicum annuum HOM05D002261 ORTHO05D002334 1.1e-19 100.9 87 55.2
Sopen11g020370 Solanum pennellii HOM05D002261 ORTHO05D002334 1.4e-19 100.5 87 57.5
PGSC0003DMG400009893 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.1e-19 99.0 86 58.1
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 9.2e-19 97.8 69 65.2
Nitab4.5_0007866g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-18 97.4 161 34.2
Nitab4.5_0002942g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-18 97.1 93 50.5
CAN.G352.57 Capsicum annuum HOM05D002261 ORTHO05D002334 4.6e-18 95.5 77 59.7
Nitab4.5_0001899g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-18 95.5 93 50.5
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 4.6e-18 95.5 177 36.2
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.8e-18 94.7 93 50.5
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.8e-18 94.7 180 31.1
CAN.G352.58 Capsicum annuum HOM05D002261 ORTHO05D002334 1.7e-17 93.6 89 53.9
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 1.7e-17 93.6 245 27.8
Nitab4.5_0000119g0230 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-17 92.4 196 35.2
Nitab4.5_0011589g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-17 92.0 93 49.5
Peaxi162Scf00345g00126 Petunia axillaris HOM05D002261 ORTHO05D002334 5.1e-17 92.0 178 32.0
Sopen09g011030 Solanum pennellii HOM05D002261 ORTHO05D002334 5.1e-17 92.0 93 47.3
Solyc01g066612.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 6.6e-17 91.7 63 65.1
Solyc11g013730.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 6.6e-17 91.7 90 48.9
PGSC0003DMG400030801 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.6e-17 91.7 85 54.1
Nitab4.5_0009143g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.6e-17 91.3 160 35.0
Nitab4.5_0005200g0070 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-16 90.5 146 40.4
Nitab4.5_0003349g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.5e-16 89.7 93 49.5
Solyc07g014750.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.5e-16 89.7 65 61.5
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 2.5e-16 89.7 161 37.3
CAN.G784.3 Capsicum annuum HOM05D002261 ORTHO05D002334 9.5e-16 87.8 84 53.6
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-15 87.0 106 44.3
Nitab4.5_0007046g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-15 86.7 94 46.8
PGSC0003DMG400033635 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.1e-15 86.7 86 52.3
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-15 85.9 93 46.2
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 8.1e-15 84.7 93 46.2
Solyc05g017797.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.1e-14 82.8 54 68.5
Solyc03g044833.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 4.0e-14 82.4 93 46.2
Solyc03g150112.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 8.9e-14 81.3 65 56.9
Peaxi162Scf00434g00033 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-13 80.5 199 31.7
CAN.G339.20 Capsicum annuum HOM05D002261 ORTHO05D002334 2.6e-13 79.7 92 44.6
PGSC0003DMG400024382 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.6e-13 79.7 93 43.0
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-13 79.3 92 40.2
Peaxi162Scf00224g00009 Petunia axillaris HOM05D002261 ORTHO05D002334 3.4e-13 79.3 91 39.6
Nitab4.5_0000091g0370 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.8e-13 78.6 88 47.7
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.8e-13 78.6 89 42.7
Sopen12g016550 Solanum pennellii HOM05D002261 ORTHO05D002334 7.6e-13 78.2 101 44.6
PGSC0003DMG400033169 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.6e-13 78.2 54 64.8
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.9e-13 77.8 115 37.4
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.9e-13 77.8 196 30.1
CAN.G165.12 Capsicum annuum HOM05D002261 ORTHO05D002334 1.3e-12 77.4 181 27.6
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 77.4 91 47.3
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-12 77.0 182 28.6
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-12 76.6 205 27.8
Nitab4.5_0000600g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-11 74.3 82 47.6
PGSC0003DMG400044414 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.4e-11 73.9 68 47.1
Nitab4.5_0000570g0170 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.4e-11 73.2 93 43.0
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.4e-11 73.2 194 27.8
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 2.4e-11 73.2 73 46.6
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 2.4e-11 73.2 233 27.0
Solyc01g066616.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 4.1e-11 72.4 44 70.5
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-11 72.4 93 43.0
PGSC0003DMG401017944 Solanum tuberosum HOM05D002261 ORTHO05D024797 5.4e-11 72.0 94 40.4
Nitab4.5_0001282g0010 Nicotiana tabacum HOM05D018158 ORTHO05D002334 7.1e-11 71.6 37 94.6
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.2e-11 71.2 85 42.4
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 9.2e-11 71.2 246 26.8
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-10 69.7 183 28.4
Sopen08g012520 Solanum pennellii HOM05D002261 ORTHO05D002334 2.7e-10 69.7 52 59.6
CAN.G129.27 Capsicum annuum HOM05D002261 ORTHO05D000137 1.0e-09 67.8 181 28.2
CAN.G170.120 Capsicum annuum HOM05D002261 ORTHO05D002334 1.0e-09 67.8 52 61.5
Nitab4.5_0000230g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-09 67.4 176 27.8
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 2.3e-09 66.6 95 40.0
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 3.9e-09 65.9 84 38.1
Nitab4.5_0000877g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-09 65.5 85 42.4
Nitab4.5_0005642g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-09 65.5 69 52.2
Nitab4.5_0013711g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.6e-09 65.1 64 51.6
CAN.G315.7 Capsicum annuum HOM05D002261 ORTHO05D002334 1.1e-08 64.3 189 27.0
CAN.G759.5 Capsicum annuum HOM05D000185 ORTHO05D000823 1.5e-08 63.9 83 41.0
Nitab4.5_0009094g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.9e-08 63.5 55 45.5
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.6e-08 62.0 98 37.8
PGSC0003DMG400021840 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.3e-08 61.6 106 39.6
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-08 61.6 171 22.8
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 9.6e-08 61.2 235 22.1
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.6e-08 61.2 105 41.9
Nitab4.5_0009344g0060 Nicotiana tabacum HOM05D018158 ORTHO05D002334 1.6e-07 60.5 38 76.3
Peaxi162Scf00582g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-07 60.5 58 43.1
Solyc09g055990.2 Solanum lycopersicum HOM05D000049 ORTHO05D002334 1.6e-07 60.5 95 43.2
PGSC0003DMG400020042 Solanum tuberosum HOM05D018158 ORTHO05D002334 1.6e-07 60.5 42 69.0
Nitab4.5_0000517g0070 Nicotiana tabacum HOM05D018158 ORTHO05D002334 3.6e-07 59.3 38 73.7
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 4.7e-07 58.9 85 34.1
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.2e-07 58.5 203 26.6
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.1e-07 58.2 82 32.9
Nitab4.5_0000216g0150 Nicotiana tabacum HOM05D018158 ORTHO05D002334 1.4e-06 57.4 38 71.1
CSS0015794 Camellia sinensis var. sinensis HOM05D008336 ORTHO05D010619 1.8e-06 57.0 90 34.4
CAN.G223.2 Capsicum annuum HOM05D002261 ORTHO05D002334 1.8e-06 57.0 97 34.0
CAN.G499.5 Capsicum annuum HOM05D002261 ORTHO05D002334 2.4e-06 56.6 41 68.3
Peaxi162Scf00211g00164 Petunia axillaris HOM05D002261 ORTHO05D002334 2.4e-06 56.6 42 59.5
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 3.1e-06 56.2 241 19.9
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 4.0e-06 55.8 242 20.7
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 4.0e-06 55.8 80 40.0
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-06 55.5 214 22.4
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 8.9e-06 54.7 245 20.4
Peaxi162Scf00842g00011 Petunia axillaris HOM05D002261 ORTHO05D002334 8.9e-06 54.7 82 40.2
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.9e-06 54.7 44 52.3


User provided reference genes

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