Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 2.2e-140 502.3 249 100.0
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 7.9e-135 483.8 249 96.4
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 6.1e-127 457.6 250 90.4
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 2.3e-126 455.7 250 90.0
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 3.0e-126 455.3 250 90.0
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 2.1e-119 432.6 258 85.7
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 3.6e-119 431.8 251 87.3
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 4.4e-93 345.1 214 80.8
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 1.6e-90 336.7 235 73.6
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 1.6e-90 336.7 231 73.2
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 2.7e-90 335.9 253 70.4
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 6.0e-90 334.7 270 67.0
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 6.0e-90 334.7 227 74.9
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 1.0e-89 334.0 254 68.9
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 1.0e-89 334.0 243 69.1
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 1.7e-89 333.2 218 78.0
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 3.0e-89 332.4 221 73.8
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 3.0e-89 332.4 254 69.7
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 6.6e-89 331.3 258 70.2
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 4.3e-88 328.6 229 72.1
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 4.3e-88 328.6 233 73.8
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 5.6e-88 328.2 183 85.2
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 5.6e-88 328.2 230 75.2
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 7.3e-88 327.8 252 69.0
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 1.2e-87 327.0 252 68.7
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 1.2e-87 327.0 260 66.5
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 3.6e-87 325.5 260 66.9
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.8e-86 323.2 255 66.7
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 2.3e-86 322.8 255 66.7
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 3.1e-86 322.4 233 72.1
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 3.1e-86 322.4 254 66.5
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 4.0e-86 322.0 266 66.9
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 8.9e-86 320.9 192 81.2
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 8.9e-86 320.9 192 80.7
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.2e-85 320.5 255 66.3
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 1.2e-85 320.5 260 64.2
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 1.5e-85 320.1 222 71.6
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 1.5e-85 320.1 222 71.6
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.5e-85 320.1 258 66.7
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 2.0e-85 319.7 225 72.4
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 2.0e-85 319.7 225 72.4
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 2.6e-85 319.3 227 72.2
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 4.4e-85 318.5 222 71.6
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 4.4e-85 318.5 233 68.7
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 9.9e-85 317.4 258 67.1
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 1.3e-84 317.0 223 70.0
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 1.3e-84 317.0 237 66.7
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 1.3e-84 317.0 217 74.2
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 1.7e-84 316.6 264 64.0
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 1.7e-84 316.6 258 63.2
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 2.2e-84 316.2 233 68.7
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 2.9e-84 315.8 224 71.4
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 6.4e-84 314.7 258 62.8
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 6.4e-84 314.7 222 71.6
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 1.1e-83 313.9 222 70.3
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 1.1e-83 313.9 222 70.3
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 1.1e-83 313.9 222 70.3
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.1e-83 313.9 263 64.3
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 1.1e-83 313.9 198 78.8
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 1.4e-83 313.5 250 65.2
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 1.9e-83 313.2 220 71.4
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 2.4e-83 312.8 257 65.4
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 3.2e-83 312.4 224 69.6
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 3.2e-83 312.4 227 70.0
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 4.1e-83 312.0 244 68.9
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 4.1e-83 312.0 262 64.5
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 4.1e-83 312.0 229 67.7
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 5.4e-83 311.6 258 65.1
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 5.4e-83 311.6 258 65.1
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 5.4e-83 311.6 225 69.3
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 7.1e-83 311.2 229 69.4
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 1.2e-82 310.5 263 63.9
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 1.2e-82 310.5 254 64.6
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 2.7e-82 309.3 200 75.0
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 3.5e-82 308.9 233 68.2
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.5e-82 308.9 260 63.5
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 6.0e-82 308.1 273 62.6
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 1.3e-81 307.0 258 65.1
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.7e-81 306.6 262 63.0
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 2.3e-81 306.2 253 66.8
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 8.6e-81 304.3 233 68.7
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 1.1e-80 303.9 290 59.0
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 3.3e-80 302.4 217 71.0
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 3.3e-80 302.4 276 59.1
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 4.3e-80 302.0 257 63.4
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 4.3e-80 302.0 252 64.7
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 7.3e-80 301.2 245 63.7
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 3.6e-79 298.9 185 76.8
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 3.6e-79 298.9 220 67.7
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 8.1e-79 297.7 241 64.7
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.2e-77 293.9 173 83.2
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 1.5e-77 293.5 219 68.0
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 9.9e-77 290.8 171 81.9
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 9.9e-77 290.8 252 61.1
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 1.9e-75 286.6 217 68.7
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 4.1e-75 285.4 290 55.5
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 7.1e-75 284.6 219 66.2
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 9.2e-75 284.3 185 74.1
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 3.5e-74 282.3 216 66.7
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 1.5e-72 276.9 251 59.0
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.5e-69 266.9 137 92.0
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 4.6e-66 255.4 221 60.2
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 7.8e-66 254.6 181 70.7
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 3.3e-64 249.2 218 58.7
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 1.8e-57 226.9 122 88.5
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 7.4e-56 221.5 184 63.6
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 9.3e-51 204.5 209 53.1
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 1.6e-47 193.7 193 52.3
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 1.4e-46 190.7 135 70.4
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 3.1e-46 189.5 180 58.3
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 1.0e-44 184.5 208 50.5
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 4.5e-37 159.1 175 48.0
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.7e-36 157.1 123 57.7
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 6.7e-33 145.2 113 67.3
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 7.4e-32 141.7 187 44.9
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.2e-31 140.2 111 66.7
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.1e-30 137.9 71 90.1
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 6.1e-26 122.1 61 91.8
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 2.6e-21 106.7 128 49.2
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.0e-20 104.8 81 66.7
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 4.2e-19 99.4 57 80.7
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 5.7e-16 89.0 121 48.8
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 7.4e-16 88.6 50 78.0
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 3.7e-15 86.3 75 57.3
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 9.1e-14 81.6 72 59.7
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 2.2e-12 77.0 116 45.7
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 2.5e-11 73.6 102 42.2
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 4.7e-10 69.3 45 75.6
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 1.4e-09 67.8 62 54.8


User provided reference genes

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