Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.6e-180 634.8 320 100.0
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.5e-175 617.8 313 98.7
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 3.5e-167 591.7 323 91.6
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.4e-163 579.7 316 91.5
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 8.9e-163 577.0 316 91.5
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 1.4e-152 543.1 314 87.9
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 7.8e-143 510.8 322 79.5
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 3.0e-142 508.8 320 78.8
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.8e-140 502.3 312 78.5
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 6.2e-140 501.1 325 76.9
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 3.1e-139 498.8 323 76.5
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 2.0e-138 496.1 311 80.1
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 4.4e-138 495.0 307 78.5
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 1.3e-137 493.4 323 76.2
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.1e-136 490.3 309 78.3
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 5.4e-136 488.0 321 75.7
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.2e-135 486.9 307 78.8
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.2e-135 486.9 311 76.8
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.6e-135 486.5 308 77.9
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.6e-135 486.5 311 76.5
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 2.1e-135 486.1 310 77.7
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 4.6e-135 485.0 308 77.9
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.0e-134 483.8 311 76.8
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.7e-134 483.0 306 78.4
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 8.6e-134 480.7 311 75.6
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.1e-133 480.3 307 78.2
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 3.3e-133 478.8 307 77.9
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.3e-133 478.8 310 76.5
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 9.6e-133 477.2 305 76.7
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.2e-132 476.9 306 76.5
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 1.6e-132 476.5 318 75.8
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.6e-132 475.3 306 77.5
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 4.7e-132 474.9 314 74.8
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 8.1e-132 474.2 306 75.8
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.1e-131 473.8 306 77.1
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.8e-131 473.0 307 77.2
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.8e-131 473.0 313 74.4
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.8e-131 473.0 313 75.7
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 4.0e-131 471.9 307 75.9
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 4.0e-131 471.9 309 76.7
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 4.0e-131 471.9 308 74.7
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 8.9e-131 470.7 332 72.6
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 1.2e-130 470.3 323 74.0
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.2e-130 470.3 310 73.5
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.5e-130 469.9 326 71.5
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.5e-130 469.9 307 75.2
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.6e-130 469.2 313 76.4
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.4e-130 468.4 310 74.2
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 2.2e-129 466.1 306 74.8
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.1e-128 463.8 305 74.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.1e-128 463.8 314 72.6
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 1.4e-128 463.4 313 73.8
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.9e-128 463.0 322 73.0
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 2.4e-128 462.6 314 72.6
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 2.4e-128 462.6 314 72.6
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 2.4e-128 462.6 352 67.3
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 3.2e-128 462.2 307 74.9
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 9.3e-128 460.7 314 73.9
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.2e-127 460.3 307 75.2
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 2.1e-127 459.5 305 73.1
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 2.7e-127 459.1 314 74.8
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.5e-127 458.8 308 74.0
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.6e-127 458.4 305 76.1
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 7.8e-127 457.6 309 74.1
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.0e-126 457.2 313 72.2
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.3e-126 456.8 313 72.2
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.7e-126 456.4 313 72.8
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 3.9e-126 455.3 305 72.1
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 5.1e-126 454.9 306 73.2
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.6e-126 454.5 314 72.0
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 6.6e-126 454.5 304 73.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.5e-125 453.4 289 78.5
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 1.5e-125 453.4 322 69.6
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.5e-125 453.4 316 71.5
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 1.9e-125 453.0 312 71.2
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.5e-125 452.6 311 71.4
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 5.6e-125 451.4 305 71.8
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 5.6e-125 451.4 306 72.9
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 7.3e-125 451.1 306 75.8
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.3e-124 450.3 321 70.4
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 1.6e-124 449.9 305 71.1
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.6e-124 449.9 305 71.8
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 3.6e-124 448.7 319 69.3
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 4.8e-124 448.4 313 70.9
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 6.2e-124 448.0 309 71.2
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 8.1e-124 447.6 316 68.4
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.1e-123 447.2 310 72.3
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.4e-123 446.8 311 70.4
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 1.4e-123 446.8 305 72.5
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.8e-123 446.4 347 66.6
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.8e-123 446.4 328 70.4
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 2.4e-123 446.0 306 70.9
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 2.4e-123 446.0 305 70.5
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 2.4e-123 446.0 306 73.2
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 2.4e-123 446.0 315 70.5
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 3.1e-123 445.7 306 70.9
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 4.0e-123 445.3 306 70.9
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.0e-123 445.3 311 71.4
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 5.3e-123 444.9 317 70.7
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 6.9e-123 444.5 306 70.6
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 9.0e-123 444.1 321 70.1
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 9.0e-123 444.1 312 69.2
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 1.2e-122 443.7 316 69.6
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.5e-122 443.4 311 71.7
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.5e-122 443.4 313 70.6
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.6e-122 442.6 341 65.7
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.3e-121 440.3 305 70.8
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 3.8e-121 438.7 316 69.3
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 6.4e-121 438.0 315 70.2
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 6.4e-121 438.0 305 72.1
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.1e-120 437.2 311 70.7
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.4e-120 436.8 305 72.1
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.4e-120 436.8 317 69.1
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 4.2e-120 435.3 348 66.7
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 5.4e-120 434.9 306 70.3
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 7.1e-120 434.5 309 70.2
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.0e-118 429.1 305 70.8
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.9e-117 426.4 307 71.7
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 9.6e-117 424.1 310 69.0
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 6.2e-116 421.4 309 68.9
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.3e-113 413.7 366 60.1
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 2.2e-113 412.9 301 68.4
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 3.2e-112 409.1 315 63.5
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 8.7e-110 401.0 258 76.0
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 7.4e-109 397.9 311 65.6
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.4e-107 393.7 510 46.1
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 7.6e-106 387.9 247 76.5
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.4e-104 383.6 263 73.8
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 4.8e-100 368.6 266 67.7
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 5.3e-99 365.2 248 74.2
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 1.3e-97 360.5 185 96.8
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.6e-95 353.6 311 60.1
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 3.7e-92 342.4 304 56.9
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 9.1e-91 337.8 206 80.6
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 2.9e-89 332.8 305 54.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 4.2e-88 328.9 207 74.9
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.7e-87 326.2 204 78.4
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 3.3e-85 319.3 214 76.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 2.0e-82 310.1 282 56.0
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 3.4e-82 309.3 209 74.6
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.2e-79 300.8 262 63.0
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 3.6e-79 299.3 262 62.6
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 1.8e-70 270.4 161 82.6
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.5e-66 256.1 162 75.3
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 4.0e-62 242.7 368 40.8
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.6e-61 240.0 160 72.5
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 1.8e-59 233.8 161 73.9
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 6.1e-55 218.8 144 76.4
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 7.5e-53 211.8 251 47.8
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.8e-52 209.9 151 71.5
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.1e-51 206.5 148 69.6
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.9e-44 183.3 122 72.1
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 2.9e-44 183.3 287 43.6
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 6.4e-36 155.6 146 55.5
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.1e-30 136.7 285 33.3
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.1e-27 128.3 114 55.3
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 7.8e-26 122.1 211 35.5
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 7.8e-26 122.1 339 32.2
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.7e-25 120.9 94 66.0
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 5.1e-25 119.4 61 90.2
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.8e-22 110.9 206 35.9
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.7e-18 97.1 57 78.9
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.3e-16 90.1 90 51.1
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.0e-14 83.2 56 73.2
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.8e-12 76.6 49 71.4
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 5.6e-08 62.8 108 37.0
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 4.8e-07 59.7 45 64.4
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.8e-06 57.8 46 63.0


User provided reference genes

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