Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010888g0020 Nicotiana tabacum HOM05D004194 ORTHO05D005641 1.6e-250 869.0 460 100.0
Nitab4.5_0000131g0240 Nicotiana tabacum HOM05D004194 ORTHO05D005641 4.7e-234 814.3 452 96.0
PGSC0003DMG400009343 Solanum tuberosum HOM05D004194 ORTHO05D005641 7.9e-221 770.4 451 89.6
Sopen04g030120 Solanum pennellii HOM05D004194 ORTHO05D005641 4.8e-218 761.1 452 88.7
Solyc04g076320.4 Solanum lycopersicum HOM05D004194 ORTHO05D005641 1.5e-216 756.1 452 88.3
Peaxi162Scf00454g00416 Petunia axillaris HOM05D004194 ORTHO05D005641 3.4e-216 755.0 445 89.7
CAN.G475.29 Capsicum annuum HOM05D004194 ORTHO05D005641 4.3e-203 711.4 377 93.6
Lj4A737T61 Lonicera japonica HOM05D004194 ORTHO05D005641 7.6e-200 700.7 450 80.0
Actinidia10274 Actinidia chinensis HOM05D004194 ORTHO05D005641 6.5e-199 697.6 452 80.1
Rhsim06G0071600 Rhododendron simsii HOM05D004194 ORTHO05D005641 2.5e-198 695.7 462 78.4
Dinv42612 Davidia involucrata HOM05D004194 ORTHO05D005641 3.2e-198 695.3 457 78.8
Hma1.2p1_0010F.1_g006650 Hydrangea macrophylla HOM05D004194 ORTHO05D005641 9.3e-198 693.7 454 79.7
TAR625G0434 Trochodendron aralioides HOM05D004194 ORTHO05D005641 1.0e-196 690.3 456 79.6
vmacro17477 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 2.3e-196 689.1 382 88.7
Gorai.002G139300 Gossypium raimondii HOM05D004194 ORTHO05D005641 5.1e-196 688.0 385 89.4
QL09p017817 Quercus lobata HOM05D004194 ORTHO05D005641 8.7e-196 687.2 382 89.5
CiPaw.07G165400 Carya illinoinensis HOM05D004194 ORTHO05D005641 1.5e-195 686.4 452 79.0
DCAR_012855 Daucus carota HOM05D004194 ORTHO05D005641 1.5e-195 686.4 382 88.2
Gohir.A01G126900 Gossypium hirsutum HOM05D004194 ORTHO05D005641 1.5e-195 686.4 385 89.1
Gohir.D01G114300 Gossypium hirsutum HOM05D004194 ORTHO05D005641 1.5e-195 686.4 385 89.1
GSVIVG01009181001 Vitis vinifera HOM05D004194 ORTHO05D005641 1.9e-195 686.0 383 88.0
AUR62004928 Chenopodium quinoa HOM05D004194 ORTHO05D005641 4.3e-195 684.9 382 87.7
Hund21605 Selenicereus undatus HOM05D004194 ORTHO05D005641 4.3e-195 684.9 384 87.8
MSTRG.28070 Avicennia marina HOM05D004194 ORTHO05D005641 9.7e-195 683.7 383 88.0
Nn5g29879 Nelumbo nucifera HOM05D004194 ORTHO05D005641 1.3e-194 683.3 382 86.4
AUR62001023 Chenopodium quinoa HOM05D004194 ORTHO05D005641 2.8e-194 682.2 382 87.2
Thecc.08G071000 Theobroma cacao HOM05D004194 ORTHO05D005641 2.8e-194 682.2 455 79.1
Ciclev10000871m.g Citrus clementina HOM05D004194 ORTHO05D005641 3.7e-194 681.8 451 78.5
Cc10_g15890 Coffea canephora HOM05D004194 ORTHO05D005641 3.7e-194 681.8 454 78.0
ECA232G1743 Erigeron canadensis HOM05D004194 ORTHO05D005641 3.7e-194 681.8 444 77.5
CSS0028335 Camellia sinensis var. sinensis HOM05D004194 ORTHO05D005641 4.8e-194 681.4 452 79.0
Manes.18G058500 Manihot esculenta HOM05D004194 ORTHO05D005641 4.8e-194 681.4 382 87.7
Cfa013797 Carpinus fangiana HOM05D004194 ORTHO05D005641 6.3e-194 681.0 382 87.4
Haze_22460 Corylus avellana HOM05D004194 ORTHO05D005641 1.4e-193 679.9 406 83.5
TAR381G0874 Trochodendron aralioides HOM05D004194 ORTHO05D005641 1.8e-193 679.5 452 79.2
Cpa.g.sc21.21 Carica papaya HOM05D004194 ORTHO05D005641 4.1e-193 678.3 385 87.5
Duzib093G0846 Durio zibethinus HOM05D004194 ORTHO05D005641 4.1e-193 678.3 382 88.2
FvH4_5g34710 Fragaria vesca HOM05D004194 ORTHO05D005641 5.3e-193 677.9 424 83.0
Atru.chr13.1009 Acer truncatum HOM05D004194 ORTHO05D005641 9.0e-193 677.2 383 87.7
vmacro21340 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 1.2e-192 676.8 452 77.7
Lalb_Chr11g0064971 Lupinus albus HOM05D004194 ORTHO05D005641 2.6e-192 675.6 385 86.0
MD12G1008900 Malus domestica HOM05D004194 ORTHO05D005641 3.4e-192 675.2 383 87.2
TWI12G1457 Tripterygium wilfordii HOM05D004194 ORTHO05D005641 3.4e-192 675.2 385 87.0
SalBow6G2182 Salvia bowleyana HOM05D004194 ORTHO05D005641 4.5e-192 674.9 428 80.6
VMungo1309G1669 Vigna mungo HOM05D004194 ORTHO05D005641 4.5e-192 674.9 383 86.4
PGR042G2811 Punica granatum HOM05D004194 ORTHO05D005641 5.9e-192 674.5 449 76.6
SalBow8G0776 Salvia bowleyana HOM05D004194 ORTHO05D005641 5.9e-192 674.5 424 80.9
FAN08G1093 Fragaria x ananassa HOM05D004194 ORTHO05D005641 7.7e-192 674.1 450 77.3
FAN04G1572 Fragaria x ananassa HOM05D004194 ORTHO05D005641 1.3e-191 673.3 449 77.7
Aqoxy6G00868 Aquilegia oxysepala HOM05D004194 ORTHO05D005641 1.7e-191 672.9 383 85.6
EL10Ac4g09117 Beta vulgaris HOM05D004194 ORTHO05D005641 2.9e-191 672.2 434 78.8
Glyma.04G094600 Glycine max HOM05D004194 ORTHO05D005641 3.8e-191 671.8 385 85.7
Phvul.002G296600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 6.5e-191 671.0 385 85.5
PSO210G0577 Papaver somniferum HOM05D004194 ORTHO05D005641 8.5e-191 670.6 382 86.6
Prupe.1G532200 Prunus persica HOM05D004194 ORTHO05D005641 1.1e-190 670.2 450 78.2
Hund09317 Selenicereus undatus HOM05D004194 ORTHO05D005641 1.4e-190 669.8 444 78.4
Potri.002G106200 Populus trichocarpa HOM05D004194 ORTHO05D005641 1.9e-190 669.5 452 77.2
Lsat_1_v5_gn_9_75040 Lactuca sativa HOM05D004194 ORTHO05D005641 2.5e-190 669.1 451 76.9
FAN13G1619 Fragaria x ananassa HOM05D004194 ORTHO05D005641 5.5e-190 667.9 444 77.7
PSO170G4697 Papaver somniferum HOM05D004194 ORTHO05D005641 5.5e-190 667.9 382 86.4
THA.LOC104799791 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 7.2e-190 667.5 384 85.2
ATR0767G266 Amborella trichopoda HOM05D004194 ORTHO05D005641 9.4e-190 667.2 382 85.3
Glyma.06G096700 Glycine max HOM05D004194 ORTHO05D005641 9.4e-190 667.2 385 85.2
Medtr3g100220 Medicago truncatula HOM05D004194 ORTHO05D005641 9.4e-190 667.2 385 84.7
Sp6g32570 Schrenkiella parvula HOM05D004194 ORTHO05D005641 9.4e-190 667.2 437 77.1
RcHm_v2.0_Chr7g0216141 Rosa chinensis HOM05D004194 ORTHO05D005641 1.6e-189 666.4 451 77.6
Sed0011017 Sechium edule HOM05D004194 ORTHO05D005641 1.6e-189 666.4 382 84.8
ClCG08G011660 Citrullus lanatus HOM05D004194 ORTHO05D005641 4.6e-189 664.8 383 84.1
CsaV3_3G047990 Cucumis sativus L. HOM05D004194 ORTHO05D005641 6.1e-189 664.5 382 85.3
Eucgr.F02151 Eucalyptus grandis HOM05D004194 ORTHO05D005641 6.1e-189 664.5 442 77.4
Sed0019515 Sechium edule HOM05D004194 ORTHO05D005641 6.1e-189 664.5 382 85.1
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.0e-188 663.7 439 76.8
A10p26770 Brassica napus HOM05D004194 ORTHO05D005641 1.8e-188 662.9 448 75.9
FAN18G1922 Fragaria x ananassa HOM05D004194 ORTHO05D005641 1.8e-188 662.9 434 77.9
C09p65910 Brassica napus HOM05D004194 ORTHO05D005641 2.3e-188 662.5 437 76.4
CANSAT21G1481 Cannabis sativa HOM05D004194 ORTHO05D005641 2.3e-188 662.5 446 76.5
Lsat_1_v5_gn_6_104960 Lactuca sativa HOM05D004194 ORTHO05D005641 3.0e-188 662.1 439 77.4
MELO3C003523.2 Cucumis melo HOM05D004194 ORTHO05D005641 5.1e-188 661.4 382 84.6
Lj1g0000709 Lotus japonicus HOM05D004194 ORTHO05D005641 6.7e-188 661.0 382 84.8
TPR.G6303 Trifolium pratense HOM05D004194 ORTHO05D005641 6.7e-188 661.0 385 83.4
AL6G21480 Arabidopsis lyrata HOM05D004194 ORTHO05D005641 8.8e-188 660.6 437 76.9
BcaNung01903 Brassica carinata HOM05D004194 ORTHO05D005641 8.8e-188 660.6 437 76.4
BolC9t59414H Brassica oleracea HOM05D004194 ORTHO05D005641 8.8e-188 660.6 437 76.4
Thhalv10013269m.g Eutrema salsugineum HOM05D004194 ORTHO05D005641 2.6e-187 659.1 437 76.2
Ca_23440_v3 Cicer arietinum L. HOM05D004194 ORTHO05D005641 5.7e-187 657.9 385 83.1
CsaV3_2G030250 Cucumis sativus L. HOM05D004194 ORTHO05D005641 5.7e-187 657.9 383 83.0
AT5G10920 Arabidopsis thaliana HOM05D004194 ORTHO05D005641 9.7e-187 657.1 437 76.4
Carub.0006s0941 Capsella rubella HOM05D004194 ORTHO05D005641 9.7e-187 657.1 442 76.9
THA.LOC104806871 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 9.7e-187 657.1 383 84.1
CANSAT21G2248 Cannabis sativa HOM05D004194 ORTHO05D005641 1.3e-186 656.8 433 76.9
CDE01G0047 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 1.3e-186 656.8 382 84.6
ClCG11G014580 Citrullus lanatus HOM05D004194 ORTHO05D005641 1.3e-186 656.8 384 84.4
CARHR202370 Cardamine hirsuta HOM05D004194 ORTHO05D005641 1.7e-186 656.4 437 76.2
Sabra02G0083500 Salix brachista HOM05D004194 ORTHO05D005641 2.2e-186 656.0 418 79.2
arahy.Tifrunner.gnm1.ann1.S0XZCZ Arachis hypogaea HOM05D004194 ORTHO05D005641 4.8e-186 654.8 454 75.1
CDE02G0818 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 1.1e-185 653.7 382 83.8
unitig_578.g16695 Utricularia gibba HOM05D004194 ORTHO05D005641 2.4e-185 652.5 407 81.3
MBI16_g12466_MAGBIO Magnolia biondii HOM05D004194 ORTHO05D005641 5.3e-185 651.4 375 85.1
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 3.4e-184 648.7 459 73.6
SGA_v2.0_scaffold5G02969 Striga asiatica HOM05D004194 ORTHO05D005641 5.0e-183 644.8 434 76.3
Psat5g048920 Pisum sativum HOM05D004194 ORTHO05D005641 4.2e-182 641.7 450 72.7
arahy.Tifrunner.gnm1.ann1.N12FQY Arachis hypogaea HOM05D004194 ORTHO05D005641 2.7e-181 639.0 487 70.2
MD14G1006400 Malus domestica HOM05D004194 ORTHO05D005641 4.7e-181 638.3 381 83.7
MELO3C011085.2 Cucumis melo HOM05D004194 ORTHO05D005641 6.3e-178 627.9 401 77.1
SMO143G0205 Selaginella moellendorffii HOM05D004194 ORTHO05D005641 3.5e-176 622.1 385 77.9
AagrBONN_evm.TU.Sc2ySwM_362.1891 Anthoceros agrestis HOM05D004194 ORTHO05D005641 1.5e-174 616.7 382 77.5
Mapoly0005s0193 Marchantia polymorpha HOM05D004194 ORTHO05D005641 4.7e-173 611.7 442 70.6
Zm00001eb396370 Zea mays HOM05D004194 ORTHO05D005641 6.1e-173 611.3 382 78.5
Pp3c18_13220 Physcomitrium patens HOM05D004194 ORTHO05D005641 8.0e-173 610.9 382 77.2
CBR_g48741 Chara braunii HOM05D004194 ORTHO05D005641 2.2e-170 602.8 383 75.5
COL.COLO4_35249 Corchorus olitorius HOM05D004194 ORTHO05D005641 8.5e-167 590.9 444 71.8
Migut.N01596 Erythranthe guttata HOM05D004194 ORTHO05D005641 3.2e-166 589.0 382 77.5
SHI09678 Sapria himalayana HOM05D004194 ORTHO05D005641 1.2e-165 587.0 382 77.2
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 1.2e-165 587.0 339 85.3
Sc11g0003910 Simmondsia chinensis HOM05D004194 ORTHO05D005641 8.0e-165 584.3 374 77.5
Ah.06g192260 Amaranthus hybridus HOM05D004194 ORTHO05D005641 2.3e-164 582.8 335 83.9
HPP92_001058 Vanilla planifolia HOM05D004194 ORTHO05D005641 1.3e-162 577.0 378 77.0
BcaC04g19277 Brassica carinata HOM05D004194 ORTHO05D005641 2.5e-158 562.8 437 68.0
HanXRQChr15g0484861 Helianthus annuus HOM05D004194 ORTHO05D005641 4.7e-157 558.5 446 66.6
BcaC03g13340 Brassica carinata HOM05D004194 ORTHO05D005641 1.0e-156 557.4 385 75.6
Actinidia33569 Actinidia chinensis HOM05D004194 ORTHO05D005641 1.3e-154 550.4 382 75.4
Os03g0305500 Oryza sativa ssp. japonica HOM05D004194 ORTHO05D005641 1.7e-154 550.1 352 76.7
BcaC01g05557 Brassica carinata HOM05D004194 ORTHO05D005641 8.3e-154 547.7 355 77.2
PRCOL_00005568 Prasinoderma coloniale HOM05D004194 ORTHO05D005641 1.6e-152 543.5 378 69.8
MD14G1006200 Malus domestica HOM05D004194 ORTHO05D005641 1.3e-151 540.4 448 67.9
Phvul.009G036600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 3.3e-150 535.8 296 88.2
Lalb_Chr08g0242531 Lupinus albus HOM05D004194 ORTHO05D005641 4.7e-149 531.9 296 86.5
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 6.8e-148 528.1 385 72.7
C03p24950 Brassica napus HOM05D004194 ORTHO05D005641 3.0e-143 512.7 343 75.2
BcaNung01905 Brassica carinata HOM05D004194 ORTHO05D005641 1.3e-122 444.1 371 65.0
Lj4C718T1 Lonicera japonica HOM05D004194 ORTHO05D005641 2.4e-121 439.9 320 73.1
C02p04750 Brassica napus HOM05D004194 ORTHO05D005641 1.4e-97 360.9 250 74.4
HPP92_001149 Vanilla planifolia HOM05D004194 ORTHO05D005641 1.3e-90 337.8 201 81.1
MCO11G430 Micromonas commoda HOM05D004194 ORTHO05D005641 8.2e-85 318.5 385 43.1
Oeu049771.1 Olea europaea HOM05D004194 ORTHO05D005641 1.0e-82 311.6 228 69.7
Cre01.g021251 Chlamydomonas reinhardtii HOM05D004194 ORTHO05D005641 1.3e-79 301.2 380 42.4
Oeu049772.1 Olea europaea HOM05D004194 ORTHO05D005641 1.6e-77 294.3 160 90.6
Cfa022469 Carpinus fangiana HOM05D004194 ORTHO05D005641 1.3e-74 284.6 388 41.8
Sed0012940 Sechium edule HOM05D004194 ORTHO05D005641 3.8e-74 283.1 220 67.3
arahy.Tifrunner.gnm1.ann1.1M3GV3 Arachis hypogaea HOM05D004194 ORTHO05D005641 6.1e-64 249.2 138 87.0
Oeu035352.1 Olea europaea HOM05D004194 ORTHO05D005641 2.4e-60 237.3 209 65.6
Ah.06g192250 Amaranthus hybridus HOM05D004194 ORTHO05D005641 5.2e-55 219.5 320 43.1
A02p00760 Brassica napus HOM05D004194 ORTHO05D005641 3.3e-54 216.9 165 69.1
SEGI_11237 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 4.1e-44 183.3 98 90.8
Oeu028023.1 Olea europaea HOM05D004194 ORTHO05D033851 3.3e-41 173.7 95 89.5
PSO478G2000 Papaver somniferum HOM05D004194 ORTHO05D005641 1.6e-40 171.4 95 88.4
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.2e-39 166.4 345 31.0
PSO349G0016 Papaver somniferum HOM05D004194 ORTHO05D005641 3.8e-34 150.2 81 86.4
A02p00750 Brassica napus HOM05D004194 ORTHO05D005641 9.5e-33 145.6 93 80.6
BcaB01g03715 Brassica carinata HOM05D004194 ORTHO05D005641 1.3e-29 135.2 163 49.7
Psat6g188680 Pisum sativum HOM05D004194 ORTHO05D005641 2.9e-29 134.0 93 72.0
VMungo0331G0568 Vigna mungo HOM05D004194 ORTHO05D007986 5.4e-28 129.8 100 64.0
BraA02t05060Z Brassica rapa HOM05D004194 ORTHO05D033851 2.7e-27 127.5 74 82.4
VMungo1127G2164 Vigna mungo HOM05D004194 ORTHO05D007986 3.9e-26 123.6 100 63.0
Aqoxy84s004 Aquilegia oxysepala HOM05D004194 ORTHO05D077318 3.4e-22 110.5 143 44.1
Actinidia19243 Actinidia chinensis HOM05D004194 ORTHO05D005641 1.9e-17 94.7 119 58.8
Psat6g163800 Pisum sativum HOM05D004194 ORTHO05D037373 6.4e-13 79.7 67 58.2
Psat2g086120 Pisum sativum HOM05D004194 ORTHO05D037373 3.2e-12 77.4 47 72.3
RcHm_v2.0_Chr6g0244231 Rosa chinensis HOM05D004194 ORTHO05D341107 5.4e-12 76.6 111 51.4
Sed0027437 Sechium edule HOM05D004194 ORTHO05D033851 2.1e-11 74.7 41 78.0
C02p04760 Brassica napus HOM05D004194 ORTHO05D005641 2.7e-11 74.3 54 68.5
Psat6g188720 Pisum sativum HOM05D001289 ORTHO05D005641 3.0e-10 70.9 45 77.8
SEGI_18549 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 3.9e-10 70.5 44 72.7
Psat3g096720 Pisum sativum HOM05D004194 ORTHO05D324018 2.8e-08 64.3 35 80.0
Psat5g254960 Pisum sativum HOM05D015311 ORTHO05D321322 1.4e-07 62.0 44 70.5
Psat2g086160 Pisum sativum HOM05D004194 ORTHO05D037373 6.8e-07 59.7 34 76.5


User provided reference genes

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