Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 0.0e+00 1139.8 580 100.0
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 3.0e-310 1067.8 564 96.5
Peaxi162Scf00046g02624 Petunia axillaris HOM05D005820 ORTHO05D007116 6.6e-249 864.0 568 78.5
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 8.9e-246 853.6 568 77.3
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 4.9e-244 847.8 568 76.9
CAN.G103.20 Capsicum annuum HOM05D005820 ORTHO05D007116 1.8e-238 829.3 579 75.0
PGSC0003DMG402015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 6.5e-164 581.6 364 81.0
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 2.5e-147 526.6 573 53.1
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 2.1e-146 523.5 577 51.8
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 1.7e-140 503.8 590 49.3
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 2.9e-140 503.1 570 49.3
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 5.6e-139 498.8 576 49.8
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 7.3e-139 498.4 582 48.5
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 9.5e-139 498.0 560 50.5
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 1.2e-138 497.7 579 48.2
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 6.8e-137 491.9 566 50.2
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 9.8e-136 488.0 582 47.3
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 1.3e-135 487.6 585 48.5
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 1.3e-135 487.6 574 49.0
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 1.7e-135 487.3 584 49.1
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 6.4e-135 485.3 586 48.6
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 1.9e-134 483.8 549 50.6
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 7.0e-134 481.9 581 48.4
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 9.2e-134 481.5 581 48.5
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 2.3e-132 476.9 555 49.5
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 3.0e-132 476.5 573 48.3
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 8.6e-132 474.9 578 48.1
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 5.6e-131 472.2 577 48.2
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 3.1e-129 466.5 568 48.1
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 4.0e-129 466.1 562 48.8
FvH4_7g34260 Fragaria vesca HOM05D005820 ORTHO05D007116 2.0e-128 463.8 569 48.2
MSTRG.19155 Avicennia marina HOM05D005820 ORTHO05D007116 9.8e-128 461.5 565 47.1
FAN03G2216 Fragaria x ananassa HOM05D005820 ORTHO05D007116 4.9e-127 459.1 566 48.1
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 8.3e-127 458.4 583 45.5
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 8.3e-127 458.4 640 45.0
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 1.4e-126 457.6 567 48.0
Migut.J00550 Erythranthe guttata HOM05D005820 ORTHO05D007116 1.4e-126 457.6 515 49.9
RcHm_v2.0_Chr1g0384611 Rosa chinensis HOM05D005820 ORTHO05D007116 1.4e-126 457.6 574 47.9
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 3.2e-126 456.4 572 47.6
Rhsim03G0224500 Rhododendron simsii HOM05D005820 ORTHO05D007116 4.1e-126 456.1 473 53.9
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 5.4e-126 455.7 567 47.6
FAN01G2368 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.1e-125 453.8 569 47.8
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 1.9e-123 447.2 563 46.2
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 2.5e-123 446.8 542 48.5
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 1.2e-122 444.5 570 45.8
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.2e-122 444.5 506 49.0
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 8.9e-121 438.3 526 46.6
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 1.2e-120 438.0 577 47.0
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 4.4e-120 436.0 554 47.1
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 9.9e-120 434.9 568 43.5
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 1.7e-119 434.1 526 46.4
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 3.7e-119 433.0 588 42.9
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 4.9e-119 432.6 526 46.2
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 5.4e-118 429.1 587 43.4
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 1.2e-117 427.9 553 45.6
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 6.0e-117 425.6 547 45.5
Lsat_1_v5_gn_9_46201 Lactuca sativa HOM05D005820 ORTHO05D007116 1.0e-116 424.9 574 43.4
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 1.7e-116 424.1 589 41.8
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 3.0e-116 423.3 586 42.2
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 5.1e-116 422.5 594 44.3
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 5.1e-116 422.5 565 42.7
FAN10G1332 Fragaria x ananassa HOM05D005820 ORTHO05D007116 6.6e-116 422.2 570 46.3
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 1.1e-115 421.4 565 45.7
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 1.5e-115 421.0 592 42.1
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 1.5e-115 421.0 575 42.6
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 7.3e-115 418.7 547 45.7
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 3.6e-114 416.4 548 44.2
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 4.7e-114 416.0 512 46.9
ATR0829G080 Amborella trichopoda HOM05D005820 ORTHO05D007116 1.1e-113 414.8 578 42.9
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 1.1e-113 414.8 574 42.0
SalBow3G3950 Salvia bowleyana HOM05D005820 ORTHO05D007116 1.1e-113 414.8 554 43.3
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 1.4e-113 414.5 633 40.4
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 2.4e-113 413.7 548 44.2
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 1.5e-112 411.0 436 52.3
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 4.9e-111 406.0 591 41.6
TPR.G19809 Trifolium pratense HOM05D005820 ORTHO05D007116 4.9e-111 406.0 468 49.1
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 6.4e-111 405.6 568 43.0
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 2.4e-110 403.7 588 41.7
SGA_v2.0_scaffold75G24867 Striga asiatica HOM05D005820 ORTHO05D007116 1.0e-108 398.3 573 42.6
Prupe.2G329300 Prunus persica HOM05D005820 ORTHO05D007116 1.7e-108 397.5 492 48.4
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 5.6e-107 392.5 448 50.4
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 5.6e-107 392.5 452 48.2
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 1.3e-106 391.3 519 43.4
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 2.8e-106 390.2 505 45.5
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 3.4e-104 383.3 617 38.4
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 3.3e-99 366.7 549 39.5
HPP92_000954 Vanilla planifolia HOM05D005820 ORTHO05D007116 1.4e-97 361.3 576 39.1
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 1.8e-97 360.9 350 54.3
Os10g0402200 Oryza sativa ssp. japonica HOM05D005820 ORTHO05D007116 2.4e-97 360.5 575 38.6
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 3.4e-96 356.7 393 51.4
Eucgr.A02992 Eucalyptus grandis HOM05D005820 ORTHO05D007116 5.8e-96 355.9 540 39.3
Ca_03104_v3 Cicer arietinum L. HOM05D005820 ORTHO05D007116 9.3e-94 348.6 426 47.4
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 6.7e-92 342.4 508 39.8
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 2.4e-89 334.0 378 51.1
AUR62042764 Chenopodium quinoa HOM05D005820 ORTHO05D007116 2.1e-85 320.9 427 43.8
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 1.3e-84 318.2 289 59.2
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 5.1e-84 316.2 573 36.6
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 7.6e-80 302.4 329 49.5
MD01G1239300 Malus domestica HOM05D005820 ORTHO05D007116 1.5e-75 288.1 502 38.8
SHI15005 Sapria himalayana HOM05D005820 ORTHO05D007116 3.1e-73 280.4 304 47.7
Lj3A884T57 Lonicera japonica HOM05D005820 ORTHO05D007116 3.0e-60 237.3 280 47.1
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 5.1e-60 236.5 241 54.4
PGSC0003DMG401015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 3.7e-58 230.3 171 71.9
CAN.G557.3 Capsicum annuum HOM05D005820 ORTHO05D007116 5.9e-56 223.0 266 51.9
Pp3c16_7630 Physcomitrium patens HOM05D005820 ORTHO05D007116 2.2e-55 221.1 532 29.9
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 5.0e-55 219.9 253 50.6
Oeu001352.2 Olea europaea HOM05D005820 ORTHO05D007116 4.2e-54 216.9 274 47.4
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis HOM05D005820 ORTHO05D007116 7.2e-54 216.1 470 29.6
Mapoly0140s0032 Marchantia polymorpha HOM05D005820 ORTHO05D007116 1.6e-53 214.9 563 28.4
Cpa.g.sc43.143 Carica papaya HOM05D005820 ORTHO05D007116 1.0e-47 195.7 253 45.8
CAN.G159.6 Capsicum annuum HOM05D001691 ORTHO05D007116 1.5e-46 191.8 163 61.3
SMO203G0218 Selaginella moellendorffii HOM05D005820 ORTHO05D007116 5.4e-41 173.3 463 26.3
CBR_g52284 Chara braunii HOM05D005820 ORTHO05D007116 1.6e-40 171.8 400 29.8
arahy.Tifrunner.gnm1.ann1.86ZX86 Arachis hypogaea HOM05D005820 ORTHO05D007116 1.0e-23 115.9 197 37.1
AUR62022348 Chenopodium quinoa HOM05D005820 ORTHO05D007116 1.5e-22 112.1 98 59.2
CAN.G1793.2 Capsicum annuum HOM05D005820 ORTHO05D007116 5.6e-22 110.2 194 38.1
SEGI_39455 Sequoiadendron giganteum HOM05D005820 ORTHO05D007116 9.5e-22 109.4 166 38.0
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea HOM05D005820 ORTHO05D007116 3.7e-18 97.4 184 39.7
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea HOM05D005820 ORTHO05D007116 1.7e-15 88.6 179 37.4


User provided reference genes

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