Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 0.0e+00 1818.1 910 100.0
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 0.0e+00 1558.5 946 85.2
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 0.0e+00 1522.7 966 81.7
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 0.0e+00 1510.0 966 81.1
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 0.0e+00 1499.6 966 80.4
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 0.0e+00 1451.8 915 81.4
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 0.0e+00 1426.0 967 77.9
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 3.9e-296 1021.5 976 56.2
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 6.9e-277 957.6 978 55.0
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 1.1e-271 940.3 975 55.4
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 4.3e-271 938.3 957 55.8
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 3.4e-268 928.7 978 54.0
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 5.4e-266 921.4 979 53.5
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 9.3e-266 920.6 1005 52.6
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 1.6e-265 919.8 937 55.5
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 3.3e-263 912.1 955 53.1
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 1.8e-261 906.4 978 52.4
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 7.6e-260 901.0 977 52.2
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 1.3e-259 900.2 969 52.0
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 2.5e-258 896.0 974 51.5
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 4.6e-257 891.7 977 51.5
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 7.9e-257 891.0 977 51.5
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 8.2e-254 880.9 984 50.9
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 2.4e-253 879.4 976 52.0
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 1.3e-251 873.6 972 52.5
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 1.9e-250 869.8 934 54.1
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 7.2e-250 867.8 959 51.5
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 2.1e-249 866.3 808 57.8
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 3.9e-248 862.1 995 49.8
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 1.9e-247 859.8 985 50.5
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 7.4e-247 857.8 980 50.7
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 6.3e-246 854.7 989 50.7
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 1.1e-245 854.0 920 52.5
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 1.4e-245 853.6 950 50.8
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 1.7e-243 846.7 985 50.6
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.1e-242 844.0 935 51.1
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.2e-242 842.0 987 50.6
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.6e-241 838.6 986 50.3
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 3.0e-240 835.9 989 49.3
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 1.1e-239 833.9 983 48.7
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 2.5e-239 832.8 951 50.7
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 3.3e-239 832.4 983 49.1
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 3.3e-239 832.4 920 50.5
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 5.7e-239 831.6 929 51.9
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 7.4e-239 831.2 953 50.2
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 1.7e-238 830.1 902 52.1
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.4e-237 827.0 981 48.5
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 1.4e-237 827.0 938 50.6
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 3.1e-237 825.9 946 49.7
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 2.9e-235 819.3 966 49.3
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 8.5e-235 817.8 1000 48.0
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 1.1e-234 817.4 977 48.3
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 2.5e-234 816.2 941 50.1
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 2.7e-233 812.8 960 48.8
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 1.8e-232 810.1 948 49.6
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 8.8e-232 807.7 963 49.7
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 2.0e-231 806.6 934 50.0
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 4.4e-231 805.4 964 48.1
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 9.7e-231 804.3 966 48.7
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 3.7e-230 802.4 1008 47.3
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 3.7e-230 802.4 984 48.4
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 1.8e-229 800.0 982 47.6
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 9.1e-229 797.7 960 48.1
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 1.2e-228 797.3 994 47.3
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 1.2e-228 797.3 966 50.3
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 2.6e-228 796.2 982 48.2
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 2.6e-228 796.2 982 48.2
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 7.7e-228 794.7 953 48.4
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 2.2e-227 793.1 962 49.2
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 2.9e-227 792.7 969 47.3
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 3.2e-226 789.3 953 47.8
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 4.2e-226 788.9 953 48.3
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 9.4e-226 787.7 954 48.0
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 1.6e-225 786.9 966 48.3
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 4.7e-225 785.4 960 48.6
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 3.0e-224 782.7 805 54.9
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 2.0e-223 780.0 991 46.5
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 1.3e-222 777.3 693 59.5
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 2.2e-222 776.5 883 48.6
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 6.3e-222 775.0 804 53.6
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 3.1e-221 772.7 959 47.3
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 7.0e-221 771.5 973 48.1
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 2.7e-220 769.6 951 47.5
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 4.5e-220 768.8 959 48.4
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 5.9e-220 768.5 697 58.2
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 2.2e-219 766.5 958 47.5
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 3.8e-219 765.8 972 48.6
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 8.5e-219 764.6 955 47.0
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 8.5e-219 764.6 934 49.0
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 5.5e-218 761.9 955 47.1
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 5.5e-218 761.9 963 46.7
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 1.0e-216 757.7 702 57.5
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 1.6e-212 743.8 941 47.0
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 2.2e-211 740.0 938 47.2
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 3.8e-211 739.2 693 57.0
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 6.1e-209 731.9 935 46.5
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 3.0e-208 729.6 957 46.3
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 1.7e-206 723.8 949 45.5
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 2.4e-205 719.9 908 46.0
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 6.6e-203 711.8 932 45.8
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 3.3e-202 709.5 985 43.5
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.8e-200 703.7 728 54.4
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 1.0e-192 677.9 909 45.7
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 8.3e-190 668.3 714 51.8
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 8.3e-182 641.7 602 59.3
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 3.9e-179 632.9 944 43.4
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 2.4e-173 613.6 697 50.8
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 1.4e-168 597.8 872 41.2
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.5e-167 594.3 663 48.3
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 1.6e-161 574.3 693 46.0
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.6e-156 557.8 703 48.8
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 1.3e-147 528.1 495 56.4
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 1.5e-146 524.6 747 43.9
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 1.1e-144 518.5 463 60.5
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 2.1e-140 504.2 451 58.5
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 3.3e-138 496.9 711 41.4
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 1.4e-136 491.5 620 44.8
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 5.0e-134 483.0 575 46.3
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 2.5e-125 454.1 629 42.0
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 6.1e-124 449.5 943 33.7
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 1.0e-123 448.7 663 41.2
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 9.7e-114 415.6 513 46.4
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 1.3e-113 415.2 689 38.3
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 1.3e-102 378.6 551 44.1
Cpa.g.sc776.4 Carica papaya HOM05D004501 ORTHO05D004944 4.2e-93 347.1 288 63.2
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 1.2e-92 345.5 480 41.7
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 1.5e-90 338.6 386 51.0
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 2.4e-88 331.3 692 31.9
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 2.0e-74 285.0 348 50.6
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 3.5e-71 274.2 277 54.9
HanXRQChr15g0495741 Helianthus annuus HOM05D004501 ORTHO05D004944 6.4e-65 253.4 246 56.1
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 3.5e-63 247.7 243 53.5
CAN.G26.29 Capsicum annuum HOM05D004501 ORTHO05D004944 1.9e-61 241.9 199 67.8
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 3.1e-59 234.6 209 57.9
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 1.8e-51 208.8 201 55.7
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 1.1e-48 199.5 241 47.3
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 1.7e-41 175.6 242 43.8
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.2e-40 171.0 175 53.7
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 6.9e-35 153.7 120 64.2
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 3.5e-31 141.4 97 69.1
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 8.7e-30 136.7 109 59.6
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 3.5e-23 114.8 298 32.9
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 1.3e-22 112.8 512 25.0
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 2.3e-22 112.1 107 49.5
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 3.3e-21 108.2 66 68.2
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 7.6e-18 97.1 341 28.4
CSS0048159 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 3.9e-14 84.7 43 88.4
Sed0019349 Sechium edule HOM05D004501 ORTHO05D004944 2.5e-13 82.0 79 49.4
Zm00001eb333660 Zea mays HOM05D000230 ORTHO05D010966 2.0e-10 72.4 66 51.5
GSVIVG01006141001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.0e-09 70.1 64 48.4
MCO16G596 Micromonas commoda HOM05D004501 ORTHO05D004944 1.4e-06 59.7 308 25.6


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