Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010527g0010 Nicotiana tabacum HOM05D005257 ORTHO05D006425 7.8e-152 540.4 273 100.0
Nitab4.5_0000098g0070 Nicotiana tabacum HOM05D005257 ORTHO05D006425 1.7e-106 389.8 200 98.0
Sopen03g028060 Solanum pennellii HOM05D001816 ORTHO05D002001 7.7e-99 364.4 238 79.4
Solyc03g097280.4 Solanum lycopersicum HOM05D005257 ORTHO05D006425 1.9e-97 359.8 271 72.0
CAN.G732.36 Capsicum annuum HOM05D005257 ORTHO05D006425 5.5e-97 358.2 252 75.4
Sopen03g028050 Solanum pennellii HOM05D005257 ORTHO05D006425 2.1e-96 356.3 252 74.6
Peaxi162Scf00117g00415 Petunia axillaris HOM05D005257 ORTHO05D006425 1.2e-94 350.5 250 73.2
MSTRG.19351 Avicennia marina HOM05D005257 ORTHO05D006425 2.4e-84 316.2 252 63.5
DCAR_003248 Daucus carota HOM05D005257 ORTHO05D006425 2.5e-81 306.2 272 57.7
SalBow3G0128 Salvia bowleyana HOM05D005257 ORTHO05D006425 3.3e-81 305.8 252 62.7
GSVIVG01029949001 Vitis vinifera HOM05D005257 ORTHO05D006425 7.2e-81 304.7 248 62.9
Migut.J00763 Erythranthe guttata HOM05D005257 ORTHO05D006425 9.5e-81 304.3 249 62.2
Oeu044649.1 Olea europaea HOM05D005257 ORTHO05D006425 2.1e-80 303.1 249 63.5
Sc10g0005500 Simmondsia chinensis HOM05D005257 ORTHO05D006425 3.6e-80 302.4 269 57.6
Hma1.2p1_0768F.1_g215600 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 4.7e-80 302.0 252 60.7
SGA_v2.0_scaffold31G12800 Striga asiatica HOM05D005257 ORTHO05D006425 6.1e-80 301.6 252 60.7
TWI31G1180 Tripterygium wilfordii HOM05D005257 ORTHO05D006425 5.2e-79 298.5 249 60.2
Haze_20460 Corylus avellana HOM05D005257 ORTHO05D006425 8.9e-79 297.7 249 61.4
Atru.chr2.1463 Acer truncatum HOM05D005257 ORTHO05D006425 1.5e-78 297.0 249 61.4
FAN15G1561 Fragaria x ananassa HOM05D005257 ORTHO05D006425 2.6e-78 296.2 250 61.2
Gorai.007G258400 Gossypium raimondii HOM05D005257 ORTHO05D006425 3.4e-78 295.8 249 59.8
RcHm_v2.0_Chr6g0270841 Rosa chinensis HOM05D005257 ORTHO05D006425 3.4e-78 295.8 250 61.2
Gohir.D11G243400 Gossypium hirsutum HOM05D005257 ORTHO05D006425 4.4e-78 295.4 248 60.1
TAR362G1082 Trochodendron aralioides HOM05D005257 ORTHO05D006425 4.4e-78 295.4 249 60.2
CiPaw.09G164800 Carya illinoinensis HOM05D005257 ORTHO05D006425 5.7e-78 295.0 269 56.5
FAN27G2011 Fragaria x ananassa HOM05D005257 ORTHO05D006425 7.5e-78 294.7 250 60.8
Glyma.19G114400 Glycine max HOM05D005257 ORTHO05D006425 1.3e-77 293.9 249 59.8
Nn1g06286 Nelumbo nucifera HOM05D005257 ORTHO05D006425 1.3e-77 293.9 251 60.2
Potri.013G061400 Populus trichocarpa HOM05D005257 ORTHO05D006425 1.3e-77 293.9 255 57.6
Prupe.1G541500 Prunus persica HOM05D005257 ORTHO05D006425 1.3e-77 293.9 250 60.4
FvH4_2g11600 Fragaria vesca HOM05D005257 ORTHO05D006425 2.2e-77 293.1 250 60.8
FAN24G1403 Fragaria x ananassa HOM05D005257 ORTHO05D006425 2.2e-77 293.1 250 60.8
Gohir.A11G232100 Gossypium hirsutum HOM05D005257 ORTHO05D006425 2.2e-77 293.1 249 59.0
Lalb_Chr10g0095341 Lupinus albus HOM05D005257 ORTHO05D006425 2.2e-77 293.1 249 58.2
VMungo1383G2809 Vigna mungo HOM05D005257 ORTHO05D006425 2.2e-77 293.1 249 60.2
Duzib177G0708 Durio zibethinus HOM05D005257 ORTHO05D006425 2.8e-77 292.7 249 59.8
QL07p027173 Quercus lobata HOM05D005257 ORTHO05D006425 2.8e-77 292.7 244 60.2
arahy.Tifrunner.gnm1.ann1.B386PI Arachis hypogaea HOM05D005257 ORTHO05D006425 4.9e-77 292.0 249 58.2
ClCG04G005430 Citrullus lanatus HOM05D005257 ORTHO05D006425 4.9e-77 292.0 249 58.6
Thecc.05G245000 Theobroma cacao HOM05D005257 ORTHO05D006425 4.9e-77 292.0 249 59.0
Aqoxy1G00543 Aquilegia oxysepala HOM05D005257 ORTHO05D006425 6.3e-77 291.6 293 53.2
MELO3C008815.2 Cucumis melo HOM05D005257 ORTHO05D006425 8.3e-77 291.2 249 58.6
Glyma.16G038400 Glycine max HOM05D005257 ORTHO05D006425 8.3e-77 291.2 249 59.0
arahy.Tifrunner.gnm1.ann1.YCKM6W Arachis hypogaea HOM05D005257 ORTHO05D006425 1.1e-76 290.8 249 57.8
Eucgr.A02125 Eucalyptus grandis HOM05D005257 ORTHO05D006425 1.1e-76 290.8 269 56.5
arahy.Tifrunner.gnm1.ann1.JQ1SRI Arachis hypogaea HOM05D005257 ORTHO05D006425 1.4e-76 290.4 249 57.8
MBI05_g13905_MAGBIO Magnolia biondii HOM05D005257 ORTHO05D006425 1.4e-76 290.4 269 57.2
Cc06_g07290 Coffea canephora HOM05D005257 ORTHO05D006425 2.4e-76 289.7 252 59.5
Medtr7g086290 Medicago truncatula HOM05D005257 ORTHO05D006425 2.4e-76 289.7 249 59.4
Phvul.001G113700 Phaseolus vulgaris HOM05D005257 ORTHO05D006425 2.4e-76 289.7 249 60.2
Sabra13G0054300 Salix brachista HOM05D005257 ORTHO05D006425 2.4e-76 289.7 255 56.9
arahy.Tifrunner.gnm1.ann1.DQ02GG Arachis hypogaea HOM05D005257 ORTHO05D006425 3.2e-76 289.3 249 57.4
Ciclev10018934m.g Citrus clementina HOM05D005257 ORTHO05D006425 4.1e-76 288.9 249 59.4
Carub.0006s1614 Capsella rubella HOM05D005257 ORTHO05D006425 9.2e-76 287.7 255 55.7
PGR042G1596 Punica granatum HOM05D005257 ORTHO05D006425 9.2e-76 287.7 249 58.2
CsaV3_4G012150 Cucumis sativus L. HOM05D005257 ORTHO05D006425 1.2e-75 287.3 249 57.8
Aa31LG11G11610 Aethionema arabicum HOM05D005257 ORTHO05D006425 1.6e-75 287.0 249 56.6
AUR62036264 Chenopodium quinoa HOM05D005257 ORTHO05D006425 1.6e-75 287.0 269 55.8
AL6G29030 Arabidopsis lyrata HOM05D005257 ORTHO05D006425 4.5e-75 285.4 255 56.1
EL10Ac5g11757 Beta vulgaris HOM05D005257 ORTHO05D006425 5.9e-75 285.0 248 58.1
AUR62039715 Chenopodium quinoa HOM05D005257 ORTHO05D006425 5.9e-75 285.0 269 55.0
AT5G17930 Arabidopsis thaliana HOM05D005257 ORTHO05D006425 7.8e-75 284.6 255 55.3
Cpa.g.sc56.49 Carica papaya HOM05D005257 ORTHO05D006425 1.3e-74 283.9 269 54.3
MD12G1008000 Malus domestica HOM05D005257 ORTHO05D006425 1.7e-74 283.5 250 59.6
BraA02t05418Z Brassica rapa HOM05D005257 ORTHO05D006425 2.3e-74 283.1 255 56.5
PSO384G0627 Papaver somniferum HOM05D005257 ORTHO05D006425 2.9e-74 282.7 249 56.2
BcaB05g23293 Brassica carinata HOM05D005257 ORTHO05D006425 3.9e-74 282.3 255 56.1
Thhalv10012737m.g Eutrema salsugineum HOM05D005257 ORTHO05D006425 3.9e-74 282.3 255 55.3
A02p04570 Brassica napus HOM05D005257 ORTHO05D006425 5.0e-74 282.0 255 56.1
C02p09500 Brassica napus HOM05D005257 ORTHO05D006425 5.0e-74 282.0 255 56.1
BolC2t06856H Brassica oleracea HOM05D005257 ORTHO05D006425 5.0e-74 282.0 255 56.1
Ca_08293_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 6.6e-74 281.6 249 57.8
Ca_29914_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 6.6e-74 281.6 249 57.8
Sp6g26340 Schrenkiella parvula HOM05D005257 ORTHO05D006425 6.6e-74 281.6 255 55.7
THA.LOC104802876 Tarenaya hassleriana HOM05D005257 ORTHO05D006425 6.6e-74 281.6 252 56.3
TPR.G17857 Trifolium pratense HOM05D005257 ORTHO05D006425 6.6e-74 281.6 252 57.9
Manes.08G154800 Manihot esculenta HOM05D005257 ORTHO05D006425 1.1e-73 280.8 249 57.0
Lj1g0012853 Lotus japonicus HOM05D005257 ORTHO05D006425 1.5e-73 280.4 249 57.8
PSO339G0351 Papaver somniferum HOM05D005257 ORTHO05D006425 1.5e-73 280.4 249 56.6
Sed0016053 Sechium edule HOM05D005257 ORTHO05D006425 2.5e-73 279.6 249 56.6
PGR042G3559 Punica granatum HOM05D005257 ORTHO05D006425 4.3e-73 278.9 269 53.9
CARHR195170 Cardamine hirsuta HOM05D005257 ORTHO05D006425 2.1e-72 276.6 255 54.5
Psat3g087120 Pisum sativum HOM05D005257 ORTHO05D006425 4.7e-72 275.4 249 55.8
Hund03701 Selenicereus undatus HOM05D005257 ORTHO05D006425 4.7e-72 275.4 269 54.3
ECA232G0672 Erigeron canadensis HOM05D005257 ORTHO05D006425 1.0e-71 274.2 248 55.2
Actinidia21524 Actinidia chinensis HOM05D005257 ORTHO05D006425 2.3e-71 273.1 255 56.1
HPP92_025446 Vanilla planifolia HOM05D005257 ORTHO05D006425 2.3e-71 273.1 270 53.0
CANSAT35G0669 Cannabis sativa HOM05D005257 ORTHO05D006425 4.0e-71 272.3 249 55.8
Lsat_1_v5_gn_9_60281 Lactuca sativa HOM05D005257 ORTHO05D006425 5.2e-71 271.9 252 55.2
ATR0697G033 Amborella trichopoda HOM05D005257 ORTHO05D006425 8.9e-71 271.2 269 50.9
Lj4C106T9 Lonicera japonica HOM05D005257 ORTHO05D006425 9.8e-70 267.7 248 58.1
CDE10G0660 Ceratophyllum demersum HOM05D005257 ORTHO05D006425 2.2e-69 266.5 269 52.4
CSS0043158 Camellia sinensis var. sinensis HOM05D005257 ORTHO05D006425 1.4e-68 263.8 241 56.8
HanXRQChr02g0058981 Helianthus annuus HOM05D005257 ORTHO05D006425 2.0e-67 260.0 263 52.5
HanXRQChr12g0354211 Helianthus annuus HOM05D005257 ORTHO05D006425 2.0e-67 260.0 263 52.5
Os05g0147200 Oryza sativa ssp. japonica HOM05D005257 ORTHO05D006425 2.0e-67 260.0 249 53.8
Lj1g0008743 Lotus japonicus HOM05D005257 ORTHO05D006425 2.7e-67 259.6 239 57.7
Hund15057 Selenicereus undatus HOM05D005257 ORTHO05D006425 3.5e-67 259.2 291 49.8
Zm00001eb417990 Zea mays HOM05D005257 ORTHO05D006425 6.0e-67 258.5 249 51.8
Rhsim08G0079300 Rhododendron simsii HOM05D005257 ORTHO05D006425 9.5e-65 251.1 293 46.4
GSVIVG01027853001 Vitis vinifera HOM05D005257 ORTHO05D006425 4.0e-63 245.7 250 52.8
vmacro18109 Vaccinium macrocarpon HOM05D005257 ORTHO05D006425 3.7e-61 239.2 315 43.2
SEGI_02385 Sequoiadendron giganteum HOM05D005257 ORTHO05D006425 1.9e-60 236.9 242 50.0
AagrBONN_evm.TU.Sc2ySwM_340.475 Anthoceros agrestis HOM05D005257 ORTHO05D006425 7.8e-59 231.5 272 46.3
Hma1.2p1_0768F.1_g215610 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 6.6e-58 228.4 190 62.1
Mapoly0135s0015 Marchantia polymorpha HOM05D005257 ORTHO05D006425 1.4e-52 210.7 270 40.7
CBR_g51831 Chara braunii HOM05D005257 ORTHO05D006425 6.6e-50 201.8 306 38.2
Pp3c3_21680 Physcomitrium patens HOM05D005257 ORTHO05D006425 9.6e-49 198.0 250 41.2
SMO172G0149 Selaginella moellendorffii HOM05D005257 ORTHO05D006425 5.8e-46 188.7 238 43.7
MBI05_g42570_MAGBIO Magnolia biondii HOM05D005257 ORTHO05D006425 2.7e-35 153.3 167 50.3
Cfa017688 Carpinus fangiana HOM05D005257 ORTHO05D006425 1.0e-34 151.4 162 51.2
Dinv11935 Davidia involucrata HOM05D005257 ORTHO05D006425 2.5e-33 146.7 147 52.4
Dinv05572 Davidia involucrata HOM05D005257 ORTHO05D006425 9.6e-33 144.8 184 45.1
Ah.15g100140 Amaranthus hybridus HOM05D005257 ORTHO05D006425 9.0e-31 138.3 167 48.5
Cfa005496 Carpinus fangiana HOM05D005257 ORTHO05D006425 1.5e-30 137.5 146 52.7
COL.COLO4_28605 Corchorus olitorius HOM05D005257 ORTHO05D006425 1.9e-25 120.6 135 48.9
Cfa005497 Carpinus fangiana HOM05D005257 ORTHO05D006425 5.6e-25 119.0 90 64.4
TPR.G36393 Trifolium pratense HOM05D005257 ORTHO05D006425 7.6e-22 108.6 77 68.8
Cre09.g415200 Chlamydomonas reinhardtii HOM05D005257 ORTHO05D006425 4.6e-19 99.4 280 30.0
MCO03G302 Micromonas commoda HOM05D005257 ORTHO05D006425 2.5e-12 77.0 240 27.1
Ah.15g100130 Amaranthus hybridus HOM05D005257 ORTHO05D006425 1.8e-07 60.8 43 62.8
Atru.ctg1436.26 Acer truncatum HOM05D005257 ORTHO05D006425 1.0e-05 55.1 232 24.6


User provided reference genes

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