Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 4.9e-79 297.7 151 100.0
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 3.1e-41 172.2 173 59.5
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 2.0e-40 169.5 173 59.5
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.0e-36 157.1 122 73.8
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 4.3e-35 151.8 153 60.1
Sopen06g014330 Solanum pennellii HOM05D000014 ORTHO05D010301 1.3e-34 150.2 171 53.2
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 1.1e-33 147.1 151 59.6
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 3.3e-27 125.6 121 62.0
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 2.7e-21 105.9 128 50.0
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 4.7e-21 105.1 173 42.8
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 7.0e-17 91.3 169 40.2
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 2.0e-16 89.7 179 36.9
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 1.0e-15 87.4 174 36.8
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 1.7e-15 86.7 159 37.1
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 2.2e-15 86.3 166 38.6
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 3.8e-15 85.5 168 37.5
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 6.5e-15 84.7 169 37.3
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 1.5e-14 83.6 153 36.6
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 2.5e-14 82.8 162 36.4
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 4.2e-14 82.0 179 36.3
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 1.6e-13 80.1 172 37.2
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.6e-13 80.1 179 36.3
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 6.1e-13 78.2 178 34.3
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 6.1e-13 78.2 178 34.3
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 6.1e-13 78.2 152 36.2
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 1.8e-12 76.6 171 37.4
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 3.0e-12 75.9 148 37.2
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 4.0e-12 75.5 153 36.6
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 5.2e-12 75.1 149 37.6
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 6.7e-12 74.7 163 36.8
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 8.8e-12 74.3 175 34.9
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 8.8e-12 74.3 167 35.9
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 3.3e-11 72.4 147 36.1
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 3.3e-11 72.4 169 36.1
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 5.7e-11 71.6 162 34.0
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 7.5e-11 71.2 147 36.1
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 2.8e-10 69.3 80 50.0
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 2.8e-10 69.3 98 44.9
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 8.2e-10 67.8 154 36.4
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.1e-09 67.4 155 35.5
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 1.8e-09 66.6 155 36.1
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 7.0e-09 64.7 163 31.9
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 1.2e-08 63.9 86 45.3
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 3.5e-08 62.4 59 54.2
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 4.5e-08 62.0 169 31.4
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 1.3e-07 60.5 82 41.5
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 1.3e-07 60.5 167 31.7
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 2.2e-07 59.7 76 46.1
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 3.8e-07 58.9 160 29.4
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 5.0e-07 58.5 182 31.3
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 6.5e-07 58.2 48 62.5
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 1.1e-06 57.4 137 33.6
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 1.9e-06 56.6 44 65.9
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 3.2e-06 55.8 151 33.1
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 5.5e-06 55.1 138 35.5
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 7.2e-06 54.7 160 28.1


User provided reference genes

Program Settings