Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.0e-233 813.1 448 100.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 6.8e-161 571.2 364 87.9
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.3e-159 567.0 374 87.2
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.4e-158 563.5 364 86.8
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 9.2e-158 560.8 370 86.2
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 8.7e-116 421.4 303 75.2
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 1.0e-111 407.9 299 73.9
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 2.7e-109 399.8 302 71.9
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 6.0e-109 398.7 306 70.9
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 1.0e-108 397.9 299 72.6
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.0e-108 397.9 290 76.6
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 1.9e-107 393.7 299 71.9
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 9.7e-107 391.3 302 70.5
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.4e-105 387.5 301 70.8
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 3.1e-105 386.3 306 68.0
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.6e-104 383.3 318 69.2
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.7e-103 380.6 322 66.1
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 2.2e-103 380.2 301 67.4
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 2.9e-103 379.8 332 67.8
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 5.0e-103 379.0 333 64.0
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 6.5e-103 378.6 326 66.3
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.5e-102 375.6 319 68.0
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.6e-101 374.0 305 69.8
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 4.6e-101 372.5 335 65.7
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 4.6e-101 372.5 336 66.1
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 4.6e-101 372.5 290 64.8
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 4.6e-101 372.5 290 67.2
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 6.1e-101 372.1 326 66.9
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 6.1e-101 372.1 300 68.0
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.8e-100 370.5 303 68.3
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.8e-100 370.5 337 65.6
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.8e-100 370.5 339 65.5
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 2.3e-100 370.2 326 66.9
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 2.3e-100 370.2 299 67.6
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 3.0e-100 369.8 295 66.4
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 3.9e-100 369.4 301 66.4
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 5.1e-100 369.0 241 79.7
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 1.1e-99 367.9 297 67.7
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.1e-99 367.9 295 68.1
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.1e-99 367.9 336 65.5
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 1.5e-99 367.5 299 67.9
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 3.3e-99 366.3 337 65.0
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 4.3e-99 365.9 294 66.0
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 1.3e-98 364.4 251 72.9
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.8e-98 363.2 294 65.6
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 3.7e-98 362.8 299 68.2
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 8.2e-98 361.7 303 65.3
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 8.2e-98 361.7 306 68.6
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 8.2e-98 361.7 273 82.4
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 5.3e-97 359.0 296 66.6
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 1.5e-96 357.5 280 70.7
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.6e-96 356.7 331 63.1
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 3.4e-96 356.3 329 63.2
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 3.4e-96 356.3 341 59.5
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 5.9e-96 355.5 318 66.7
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.0e-95 354.8 304 60.5
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 1.4e-94 350.9 267 74.9
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.4e-94 350.9 245 78.0
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 4.2e-94 349.4 281 68.7
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 5.5e-94 349.0 301 63.1
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 2.7e-93 346.7 324 60.2
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 4.7e-93 345.9 345 55.7
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 7.9e-93 345.1 224 83.5
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 2.3e-92 343.6 259 69.9
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 6.7e-92 342.0 207 89.4
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.5e-91 340.9 244 76.6
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 3.3e-91 339.7 284 65.5
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 3.3e-91 339.7 239 77.0
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.8e-90 336.7 306 62.1
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 1.1e-89 334.7 240 77.1
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.8e-89 334.0 308 60.7
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 5.9e-88 328.9 229 79.0
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 2.9e-87 326.6 276 67.8
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 6.5e-87 325.5 260 71.2
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.2e-85 321.2 227 75.8
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.1e-83 314.7 241 72.6
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.6e-80 303.5 244 69.7
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 2.2e-79 300.4 259 64.9
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 6.8e-76 288.9 219 70.8
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 2.2e-74 283.9 223 67.7
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 3.7e-74 283.1 205 74.6
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 3.2e-70 270.0 326 51.5
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 1.2e-64 251.5 155 79.4
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 1.6e-61 241.1 161 78.3
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 4.9e-58 229.6 245 56.3
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 2.4e-57 227.3 240 57.1
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 4.5e-56 223.0 185 69.7
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 1.2e-53 214.9 204 66.2
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.0e-39 168.7 110 80.9
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 2.3e-39 167.5 187 53.5
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 5.1e-39 166.4 235 39.1
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 4.7e-29 133.3 152 47.4
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.2e-27 128.6 84 73.8
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 6.4e-26 122.9 73 94.5
QL03p065499 Quercus lobata HOM05D007647 ORTHO05D009644 5.6e-06 56.6 76 43.4


User provided reference genes

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