Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.9e-122 442.6 233 100.0
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.7e-110 402.9 253 86.6
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 8.9e-88 327.4 254 72.0
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 8.1e-81 304.3 253 66.8
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.1e-80 303.9 253 66.8
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 1.1e-80 303.9 253 67.2
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 2.5e-66 256.1 256 55.9
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 7.3e-66 254.6 218 67.0
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.1e-64 250.8 256 55.9
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 2.6e-63 246.1 256 54.3
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.4e-61 240.4 258 54.7
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 4.6e-60 235.3 256 52.0
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 5.1e-59 231.9 239 54.8
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 6.7e-59 231.5 265 49.1
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 4.3e-58 228.8 254 50.4
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 5.6e-58 228.4 228 55.3
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 4.8e-57 225.3 246 51.6
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 6.2e-57 224.9 243 51.0
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 6.2e-57 224.9 257 50.2
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 1.8e-56 223.4 238 55.9
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 9.0e-56 221.1 230 51.7
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 9.0e-56 221.1 230 51.7
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 2.6e-55 219.5 243 49.4
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.6e-55 219.5 232 52.6
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 3.4e-55 219.2 244 48.8
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 3.4e-55 219.2 257 50.6
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 5.8e-55 218.4 241 52.3
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 5.8e-55 218.4 256 47.3
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 2.2e-54 216.5 261 49.4
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 2.2e-54 216.5 256 46.1
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 3.8e-54 215.7 223 53.8
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 7.1e-53 211.5 215 56.3
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 2.1e-52 209.9 228 50.9
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 2.7e-52 209.5 228 50.9
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 3.5e-52 209.1 228 50.4
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.6e-52 208.8 272 47.4
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 7.9e-52 208.0 263 46.4
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 3.0e-51 206.1 240 47.5
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 3.9e-51 205.7 249 47.8
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 6.7e-51 204.9 219 48.9
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 5.6e-50 201.8 241 51.0
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 5.6e-50 201.8 249 47.8
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 2.8e-49 199.5 216 51.4
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 6.2e-49 198.4 245 46.5
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 8.2e-49 198.0 234 49.6
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 9.0e-48 194.5 189 54.0
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 2.0e-47 193.4 224 50.9
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 3.4e-47 192.6 180 58.3
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 3.4e-47 192.6 240 47.5
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 7.6e-47 191.4 254 46.5
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 1.3e-46 190.7 229 50.7
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 2.9e-46 189.5 230 50.4
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 2.9e-46 189.5 237 45.6
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.9e-46 188.7 234 45.7
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 6.5e-46 188.3 240 44.2
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 8.4e-46 188.0 245 44.5
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 1.4e-45 187.2 248 44.8
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 1.9e-45 186.8 237 44.7
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 4.2e-45 185.7 231 48.9
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 5.5e-45 185.3 206 51.0
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 9.3e-45 184.5 189 52.9
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.6e-44 183.7 231 48.5
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.6e-44 183.7 182 53.8
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.6e-44 183.7 231 48.1
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 3.5e-44 182.6 259 44.0
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 3.5e-44 182.6 230 47.0
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 3.5e-44 182.6 209 47.8
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 4.6e-44 182.2 219 48.9
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 7.9e-44 181.4 235 46.0
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.8e-43 180.3 241 44.8
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 5.1e-43 178.7 170 57.6
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 3.3e-42 176.0 238 42.0
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 7.4e-42 174.9 223 44.4
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 8.2e-41 171.4 222 44.6
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 1.8e-40 170.2 180 51.7
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 6.9e-40 168.3 166 54.2
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 9.0e-40 167.9 205 45.4
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 9.0e-40 167.9 212 46.2
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 2.6e-39 166.4 188 48.4
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 1.0e-38 164.5 148 58.8
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.0e-38 164.5 178 49.4
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.3e-38 164.1 180 50.0
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 1.3e-38 164.1 227 45.4
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 2.5e-37 159.8 184 48.4
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 1.2e-36 157.5 180 48.3
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.2e-36 157.5 180 48.3
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 2.3e-35 153.3 171 48.5
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.3e-33 147.5 207 42.0
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.7e-33 147.1 207 42.5
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 6.3e-33 145.2 137 57.7
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.4e-32 144.1 183 43.2
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.8e-32 143.7 200 44.0
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 4.5e-31 139.0 204 44.1
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 3.0e-27 126.3 135 50.4
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 3.9e-27 125.9 132 51.5
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 1.4e-16 90.9 94 50.0
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.9e-14 83.2 86 54.7
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 7.5e-10 68.6 172 35.5


User provided reference genes

Program Settings