Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010321g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.9e-51 203.4 107 100.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-26 123.2 92 76.1
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.3e-22 109.8 95 67.4
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 1.4e-19 99.8 83 71.1
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.5e-18 96.3 61 86.9
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 2.0e-18 95.9 62 87.1
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 4.9e-17 91.3 86 64.0
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 3.0e-14 82.0 65 73.8
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 3.0e-14 82.0 65 73.8
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 8.7e-14 80.5 50 88.0
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 1.5e-13 79.7 65 72.3
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 1.4e-11 73.2 50 80.0
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 1.4e-11 73.2 50 80.0
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 1.4e-11 73.2 50 84.0
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 3.1e-11 72.0 53 79.2
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 9.0e-11 70.5 47 85.1
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 9.0e-11 70.5 47 85.1
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 4.5e-10 68.2 47 83.0
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 1.0e-09 67.0 50 78.0
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.7e-09 66.2 47 80.9
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 2.2e-09 65.9 47 78.7
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 2.9e-09 65.5 65 61.5
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 2.9e-09 65.5 65 61.5
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 2.9e-09 65.5 65 61.5
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 2.9e-09 65.5 65 61.5
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 4.9e-09 64.7 50 74.0
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 5.5e-08 61.2 74 50.0
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.2e-07 60.1 50 76.0
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.2e-07 60.1 50 76.0
Nitab4.5_0000172g2150 Nicotiana tabacum HOM05D003517 ORTHO05D036924 1.2e-07 60.1 44 75.0
BraSC159t45733Z Brassica rapa HOM05D003517 ORTHO05D009798 1.6e-07 59.7 49 69.4
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 2.1e-07 59.3 50 74.0
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 2.1e-07 59.3 50 74.0
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 2.1e-07 59.3 50 74.0
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 2.1e-07 59.3 50 74.0
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 2.1e-07 59.3 50 74.0
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 2.1e-07 59.3 50 74.0
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 2.7e-07 58.9 74 48.6
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.3e-06 56.6 37 83.8
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 3.0e-06 55.5 59 57.6
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 6.7e-06 54.3 51 62.7


User provided reference genes

Program Settings