Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 5.6e-155 550.8 265 100.0
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.5e-147 526.2 265 95.5
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.3e-135 486.5 265 87.9
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.9e-134 482.6 265 85.7
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 5.5e-134 481.1 265 85.7
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 1.0e-132 476.9 265 85.3
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.0e-132 475.3 263 86.7
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.0e-131 472.6 265 84.9
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 5.0e-127 458.0 249 87.6
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 8.8e-124 447.2 267 80.1
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.4e-100 370.2 265 68.7
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 4.2e-94 348.6 201 81.1
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 5.5e-94 348.2 309 59.9
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 2.6e-91 339.3 265 62.3
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 2.6e-91 339.3 256 66.8
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 1.3e-90 337.0 265 60.4
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 1.7e-90 336.7 265 63.0
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 5.4e-89 331.6 265 61.5
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 9.2e-89 330.9 266 60.9
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.8e-84 316.6 265 59.6
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 1.9e-81 306.6 255 58.8
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 4.1e-81 305.4 263 56.7
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 5.4e-81 305.1 254 56.7
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 7.8e-80 301.2 254 56.3
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.3e-78 295.8 265 53.2
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.1e-76 290.8 270 53.7
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 2.3e-76 289.7 255 56.1
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 1.5e-75 287.0 265 53.2
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 1.5e-75 287.0 271 50.9
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 2.0e-75 286.6 267 53.9
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 7.5e-75 284.6 264 54.9
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 2.4e-73 279.6 270 52.6
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 3.2e-73 279.3 273 53.5
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 3.2e-73 279.3 268 53.0
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 9.2e-73 277.7 268 53.7
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 9.2e-73 277.7 263 52.1
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.6e-72 276.9 267 54.3
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.6e-72 276.9 267 52.8
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 4.6e-72 275.4 267 53.6
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 1.3e-71 273.9 265 52.5
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 5.1e-71 271.9 253 54.5
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 6.6e-71 271.6 266 52.3
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 6.6e-71 271.6 268 52.2
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.1e-70 270.8 263 51.7
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.1e-70 270.8 265 52.1
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 3.3e-70 269.2 268 51.5
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 2.1e-69 266.5 254 53.5
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 4.7e-69 265.4 264 50.0
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 4.7e-69 265.4 262 51.1
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.1e-68 264.2 264 49.6
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 8.9e-68 261.2 225 55.1
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 1.5e-67 260.4 257 50.6
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 2.0e-67 260.0 268 48.5
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 5.8e-67 258.5 265 49.4
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 9.9e-67 257.7 269 49.4
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 1.7e-66 256.9 267 49.8
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 8.3e-66 254.6 267 52.8
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 1.4e-65 253.8 267 52.1
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 5.4e-65 251.9 265 48.7
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.6e-64 250.4 234 52.6
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 7.8e-64 248.1 253 50.2
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 2.3e-63 246.5 234 51.7
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 5.1e-63 245.4 262 50.8
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 6.6e-63 245.0 192 61.5
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 6.6e-63 245.0 259 48.3
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 8.6e-63 244.6 256 50.4
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 8.6e-63 244.6 268 50.4
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 8.6e-63 244.6 268 48.9
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 8.6e-63 244.6 268 49.6
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 7.3e-62 241.5 197 59.4
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 7.3e-62 241.5 271 49.4
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 7.3e-62 241.5 270 46.3
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 1.2e-61 240.7 267 48.7
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 1.2e-61 240.7 267 48.7
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 2.1e-61 240.0 224 53.6
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 8.1e-61 238.0 211 57.3
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.1e-60 237.7 251 49.0
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.4e-60 237.3 251 49.4
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 2.4e-60 236.5 265 44.9
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 2.4e-60 236.5 265 44.9
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 2.4e-60 236.5 265 44.9
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 2.4e-60 236.5 211 55.9
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 4.0e-60 235.7 262 47.3
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 4.0e-60 235.7 262 47.7
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 4.0e-60 235.7 268 45.9
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 6.8e-60 235.0 240 49.6
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 1.5e-59 233.8 266 48.1
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 2.0e-59 233.4 255 47.5
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.6e-59 233.0 265 48.3
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 2.6e-59 233.0 249 49.0
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 4.4e-59 232.3 265 44.2
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 2.9e-58 229.6 266 43.6
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 2.9e-58 229.6 266 44.0
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 2.9e-58 229.6 272 46.0
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 3.8e-58 229.2 229 49.8
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 6.4e-58 228.4 244 48.0
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 1.1e-57 227.6 263 46.4
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 1.9e-57 226.9 266 44.4
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 2.4e-57 226.5 264 43.9
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 7.1e-57 224.9 266 43.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.6e-56 223.8 267 44.2
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 2.7e-56 223.0 253 50.2
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.7e-56 223.0 248 47.6
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 6.0e-56 221.9 250 47.2
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 1.0e-55 221.1 254 45.3
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 1.3e-55 220.7 253 45.1
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 1.7e-55 220.3 237 48.5
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 3.0e-55 219.5 268 42.9
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.1e-54 217.6 267 43.1
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.1e-54 217.6 267 43.1
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 2.5e-54 216.5 287 40.8
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 5.6e-54 215.3 314 41.7
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 7.3e-54 214.9 267 42.3
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 7.3e-54 214.9 267 42.3
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 1.3e-53 214.2 212 48.6
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 3.6e-53 212.6 274 44.5
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 4.8e-53 212.2 255 43.5
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 4.8e-53 212.2 264 44.7
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.1e-52 211.1 219 45.7
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.4e-52 209.9 270 42.2
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 1.5e-51 207.2 274 45.6
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.5e-51 207.2 267 41.2
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 4.4e-51 205.7 273 45.8
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 4.4e-51 205.7 251 46.2
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 7.6e-51 204.9 211 47.9
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.6e-51 204.9 228 47.4
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.7e-50 203.8 287 42.2
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 3.8e-50 202.6 251 45.8
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 6.4e-50 201.8 212 47.6
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 6.4e-50 201.8 211 45.5
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 8.4e-50 201.4 221 48.4
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 1.1e-49 201.1 288 41.0
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 3.2e-49 199.5 265 44.5
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 7.1e-49 198.4 214 46.7
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.7e-48 196.4 194 57.2
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 4.6e-48 195.7 253 44.7
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.3e-47 194.1 289 39.4
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 1.7e-47 193.7 265 42.3
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 2.5e-46 189.9 179 51.4
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 9.6e-46 188.0 235 43.4
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 2.1e-45 186.8 265 38.1
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 6.2e-45 185.3 179 52.0
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.4e-44 184.1 172 53.5
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.5e-43 180.6 273 39.9
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 7.1e-41 171.8 85 89.4
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 3.5e-40 169.5 163 50.9
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 3.5e-40 169.5 221 41.2
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 6.7e-39 165.2 265 40.0
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 8.7e-39 164.9 275 35.3
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.5e-38 164.1 87 89.7
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 1.1e-36 157.9 245 38.8
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 1.2e-35 154.5 303 32.3
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 1.2e-35 154.5 221 36.7
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.2e-35 154.5 145 53.8
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 1.0e-34 151.4 239 38.5
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 3.8e-34 149.4 183 42.1
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 8.4e-34 148.3 234 39.3
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 1.4e-33 147.5 139 56.1
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 2.1e-32 143.7 166 40.4
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.6e-32 142.5 179 44.1
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 6.0e-32 142.1 240 37.1
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 8.7e-31 138.3 221 40.7
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 2.5e-30 136.7 318 28.9
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.6e-29 134.0 131 50.4
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 5.0e-26 122.5 231 34.6
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.4e-25 120.9 127 50.4
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 1.4e-25 120.9 223 33.6
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.7e-24 116.7 254 36.2
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.5e-24 116.3 81 66.7
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 3.0e-23 113.2 265 29.8
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 1.1e-22 111.3 167 40.1
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 1.5e-22 110.9 135 46.7
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 9.7e-22 108.2 264 28.8
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 2.6e-19 100.1 256 30.1
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 8.8e-15 85.1 102 41.2
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 3.3e-14 83.2 94 39.4
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-12 77.4 148 30.4
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 4.1e-12 76.3 47 76.6
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 2.6e-11 73.6 78 51.3
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 7.7e-11 72.0 81 49.4
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 1.7e-10 70.9 86 45.3
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 6.1e-08 62.4 43 60.5
Actinidia09310 Actinidia chinensis HOM05D003612 ORTHO05D004323 7.9e-08 62.0 45 62.2
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 8.8e-07 58.5 57 50.9
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 2.6e-06 57.0 61 47.5


User provided reference genes

Program Settings