Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010283g0010 Nicotiana tabacum HOM05D004214 ORTHO05D004963 4.9e-134 481.1 236 100.0
Nitab4.5_0000212g0090 Nicotiana tabacum HOM05D004214 ORTHO05D004963 1.9e-109 399.4 236 86.0
PGSC0003DMG400025136 Solanum tuberosum HOM05D004214 ORTHO05D004963 4.0e-96 355.1 252 74.6
Sopen02g016310 Solanum pennellii HOM05D004214 ORTHO05D004963 1.3e-91 340.1 253 72.3
Solyc02g067120.4 Solanum lycopersicum HOM05D004214 ORTHO05D004963 8.7e-91 337.4 248 72.2
Peaxi162Scf00629g00121 Petunia axillaris HOM05D004214 ORTHO05D004963 3.7e-89 332.0 232 76.3
Oeu010226.1 Olea europaea HOM05D004214 ORTHO05D004963 1.3e-86 323.6 231 72.3
Oeu010227.1 Olea europaea HOM05D004214 ORTHO05D004963 1.3e-86 323.6 231 72.3
CAN.G979.5 Capsicum annuum HOM05D004214 ORTHO05D004963 8.4e-86 320.9 222 74.3
Dinv11505 Davidia involucrata HOM05D004214 ORTHO05D004963 2.5e-85 319.3 250 65.6
Migut.H00677 Erythranthe guttata HOM05D004214 ORTHO05D004963 5.1e-83 311.6 204 75.0
MSTRG.23916 Avicennia marina HOM05D004214 ORTHO05D004963 7.4e-82 307.8 253 64.0
Hma1.2p1_0409F.1_g146710 Hydrangea macrophylla HOM05D004214 ORTHO05D004963 4.5e-79 298.5 264 60.2
GSVIVG01011460001 Vitis vinifera HOM05D004214 ORTHO05D004963 4.5e-79 298.5 255 61.6
CSS0015906 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 1.4e-77 293.5 204 69.6
CSS0019671 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 1.4e-77 293.5 204 69.6
Cc07_g03630 Coffea canephora HOM05D004214 ORTHO05D004963 1.9e-77 293.1 220 67.7
Potri.017G087500 Populus trichocarpa HOM05D004214 ORTHO05D004963 4.2e-77 292.0 209 67.5
TWI60G1366 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 4.2e-77 292.0 248 60.1
Eucgr.I02016 Eucalyptus grandis HOM05D004214 ORTHO05D004963 4.6e-76 288.5 195 73.3
Actinidia06102 Actinidia chinensis HOM05D004214 ORTHO05D004963 1.8e-75 286.6 228 64.5
EL10Ac2g03019 Beta vulgaris HOM05D004214 ORTHO05D004963 8.8e-75 284.3 251 60.6
SalBow1G5883 Salvia bowleyana HOM05D004214 ORTHO05D004963 8.8e-75 284.3 211 67.8
TAR629G3302 Trochodendron aralioides HOM05D004214 ORTHO05D004963 1.1e-74 283.9 197 70.6
Cpa.g.sc14.113 Carica papaya HOM05D004214 ORTHO05D004963 7.4e-74 281.2 216 65.7
HanXRQChr15g0487741 Helianthus annuus HOM05D004214 ORTHO05D004963 8.2e-73 277.7 202 66.3
Sc10g0003430 Simmondsia chinensis HOM05D004214 ORTHO05D004963 8.2e-73 277.7 214 65.0
Lsat_1_v5_gn_4_169740 Lactuca sativa HOM05D004214 ORTHO05D004963 9.1e-72 274.2 227 61.7
Atru.chr8.322 Acer truncatum HOM05D004214 ORTHO05D004963 1.2e-71 273.9 218 63.8
CSS0036969 Camellia sinensis var. sinensis HOM05D004214 ORTHO05D004963 1.2e-71 273.9 222 62.6
TWI34G0797 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 5.9e-71 271.6 248 57.3
TWI34G1333 Tripterygium wilfordii HOM05D004214 ORTHO05D004963 5.9e-71 271.6 248 57.3
Hund15587 Selenicereus undatus HOM05D004214 ORTHO05D004963 1.3e-70 270.4 206 66.5
ECA232G2753 Erigeron canadensis HOM05D004214 ORTHO05D005214 8.5e-70 267.7 228 60.5
Manes.02G048700 Manihot esculenta HOM05D004214 ORTHO05D004963 1.1e-69 267.3 223 63.2
AUR62018111 Chenopodium quinoa HOM05D004214 ORTHO05D004963 1.9e-69 266.5 229 60.3
Ciclev10012515m.g Citrus clementina HOM05D004214 ORTHO05D004963 5.5e-69 265.0 212 63.7
Rhsim10G0035900 Rhododendron simsii HOM05D004214 ORTHO05D004963 1.2e-68 263.8 261 54.0
Duzib147G0992 Durio zibethinus HOM05D004214 ORTHO05D004963 3.6e-68 262.3 249 54.2
Carub.0007s3642 Capsella rubella HOM05D004214 ORTHO05D004963 1.4e-67 260.4 195 63.6
CARHR262760 Cardamine hirsuta HOM05D004214 ORTHO05D004963 1.4e-67 260.4 217 59.9
Rhsim10G0035800 Rhododendron simsii HOM05D004214 ORTHO05D004963 1.4e-67 260.4 201 65.2
unitig_62.g23442 Utricularia gibba HOM05D004214 ORTHO05D004963 1.4e-67 260.4 204 61.3
Sp7g02430 Schrenkiella parvula HOM05D004214 ORTHO05D004963 1.8e-67 260.0 195 63.1
Thhalv10027904m.g Eutrema salsugineum HOM05D004214 ORTHO05D004963 2.3e-67 259.6 195 63.6
A04p12290 Brassica napus HOM05D004214 ORTHO05D004963 2.6e-66 256.1 213 59.2
Gorai.001G240700 Gossypium raimondii HOM05D004214 ORTHO05D004963 3.3e-66 255.8 192 63.0
BcaB06g27341 Brassica carinata HOM05D004214 ORTHO05D004963 7.4e-66 254.6 213 59.6
BraA04t16893Z Brassica rapa HOM05D004214 ORTHO05D004963 7.4e-66 254.6 213 58.7
THA.LOC104805483 Tarenaya hassleriana HOM05D004214 ORTHO05D004963 1.3e-65 253.8 192 64.1
C04p45970 Brassica napus HOM05D004214 ORTHO05D004963 1.7e-65 253.4 213 58.7
BolC4t26180H Brassica oleracea HOM05D004214 ORTHO05D004963 1.7e-65 253.4 213 58.7
Thecc.04G087300 Theobroma cacao HOM05D004214 ORTHO05D004963 2.8e-65 252.7 218 56.9
AL7G50770 Arabidopsis lyrata HOM05D004214 ORTHO05D004963 3.7e-65 252.3 199 60.8
DCAR_011079 Daucus carota HOM05D004214 ORTHO05D004963 3.7e-65 252.3 209 62.2
SGA_v2.0_scaffold413G51175 Striga asiatica HOM05D004214 ORTHO05D004963 3.5e-63 245.7 199 65.3
AUR62034445 Chenopodium quinoa HOM05D004214 ORTHO05D004963 5.0e-62 241.9 172 66.9
Thhalv10028063m.g Eutrema salsugineum HOM05D004214 ORTHO05D004963 5.0e-62 241.9 214 57.5
Sp7g02440 Schrenkiella parvula HOM05D004214 ORTHO05D004963 5.0e-62 241.9 213 56.8
Lj3A346G23 Lonicera japonica HOM05D004214 ORTHO05D004963 1.9e-61 240.0 193 60.1
BraA04t16892Z Brassica rapa HOM05D004214 ORTHO05D004963 4.2e-61 238.8 195 58.5
C04p45960 Brassica napus HOM05D004214 ORTHO05D004963 9.4e-61 237.7 195 58.5
BolC4t26179H Brassica oleracea HOM05D004214 ORTHO05D004963 9.4e-61 237.7 195 58.5
BcaB06g27320 Brassica carinata HOM05D004214 ORTHO05D004963 1.6e-60 236.9 195 57.9
BcaB06g27340 Brassica carinata HOM05D004214 ORTHO05D004963 2.7e-60 236.1 190 58.9
A04p12280 Brassica napus HOM05D004214 ORTHO05D004963 8.0e-60 234.6 195 57.9
AT5G39530 Arabidopsis thaliana HOM05D004214 ORTHO05D004963 2.3e-59 233.0 167 64.7
AL7G50790 Arabidopsis lyrata HOM05D004214 ORTHO05D004963 3.0e-59 232.6 211 54.5
CARHR262800 Cardamine hirsuta HOM05D004214 ORTHO05D004963 4.0e-59 232.3 176 63.1
COL.COLO4_12225 Corchorus olitorius HOM05D004214 ORTHO05D004963 5.2e-59 231.9 184 60.3
PSO017G4463 Papaver somniferum HOM05D004214 ORTHO05D004963 8.8e-59 231.1 262 47.3
A04p12270 Brassica napus HOM05D004214 ORTHO05D004963 1.1e-58 230.7 195 56.9
BraA04t16891Z Brassica rapa HOM05D004214 ORTHO05D004963 1.1e-58 230.7 195 56.9
CDE02G0918 Ceratophyllum demersum HOM05D004214 ORTHO05D004963 2.6e-58 229.6 249 48.6
PSO478G0939 Papaver somniferum HOM05D004214 ORTHO05D004963 3.3e-58 229.2 262 46.9
Carub.0007s3643 Capsella rubella HOM05D004214 ORTHO05D004963 9.7e-58 227.6 216 52.8
Nn4g23269 Nelumbo nucifera HOM05D004214 ORTHO05D004963 1.7e-57 226.9 157 68.2
AT5G39520 Arabidopsis thaliana HOM05D004214 ORTHO05D004963 3.7e-57 225.7 221 51.1
QL02p084825 Quercus lobata HOM05D004214 ORTHO05D004963 3.7e-57 225.7 219 51.6
CARHR262810 Cardamine hirsuta HOM05D004214 ORTHO05D004963 6.3e-57 224.9 211 54.0
PGR004G0346 Punica granatum HOM05D004214 ORTHO05D004963 8.2e-57 224.6 135 76.3
ATR0564G445 Amborella trichopoda HOM05D004214 ORTHO05D004963 1.7e-54 216.9 254 46.9
Nitab4.5_0000568g0170 Nicotiana tabacum HOM05D004214 ORTHO05D004963 3.8e-54 215.7 220 49.5
SEGI_32476 Sequoiadendron giganteum HOM05D004214 ORTHO05D004963 9.4e-53 211.1 192 55.2
CAN.G206.176 Capsicum annuum HOM05D004214 ORTHO05D004963 1.2e-52 210.7 197 52.8
PGSC0003DMG401001341 Solanum tuberosum HOM05D004214 ORTHO05D004963 1.6e-52 210.3 231 48.9
PGSC0003DMG402001341 Solanum tuberosum HOM05D004214 ORTHO05D004963 1.2e-50 204.1 231 48.5
Solyc02g088270.3 Solanum lycopersicum HOM05D004214 ORTHO05D004963 1.5e-50 203.8 192 52.6
Sopen02g032950 Solanum pennellii HOM05D004214 ORTHO05D004963 2.0e-50 203.4 192 53.1
Gohir.D07G212700 Gossypium hirsutum HOM05D004214 ORTHO05D004963 9.1e-48 194.5 157 58.6
QL02p084872 Quercus lobata HOM05D004214 ORTHO05D004963 7.7e-47 191.4 194 49.0
Lj2g0016815 Lotus japonicus HOM05D004214 ORTHO05D004963 1.9e-45 186.8 195 47.7
Lj8A428G27 Lonicera japonica HOM05D004214 ORTHO05D004963 5.5e-45 185.3 194 51.5
Ca_04853_v3 Cicer arietinum L. HOM05D004214 ORTHO05D004963 1.6e-44 183.7 190 46.8
Lj3A367T10 Lonicera japonica HOM05D004214 ORTHO05D004963 1.6e-44 183.7 201 49.8
Lj3A369T15 Lonicera japonica HOM05D004214 ORTHO05D004963 2.1e-44 183.3 147 59.9
TPR.G14395 Trifolium pratense HOM05D004214 ORTHO05D004963 6.1e-44 181.8 194 46.9
Lj8A426T27 Lonicera japonica HOM05D004214 ORTHO05D004963 3.0e-43 179.5 147 59.2
arahy.Tifrunner.gnm1.ann1.55PBKN Arachis hypogaea HOM05D004214 ORTHO05D004963 1.2e-42 177.6 193 44.6
Glyma.13G060852 Glycine max HOM05D004214 ORTHO05D004963 1.2e-42 177.6 196 46.9
Phvul.004G031400 Phaseolus vulgaris HOM05D004214 ORTHO05D004963 2.0e-42 176.8 197 45.7
Lalb_Chr06g0175181 Lupinus albus HOM05D004214 ORTHO05D004963 4.4e-42 175.6 197 45.7
arahy.Tifrunner.gnm1.ann1.7SZ544 Arachis hypogaea HOM05D004214 ORTHO05D004963 5.7e-42 175.3 193 44.6
Peaxi162Scf00166g01050 Petunia axillaris HOM05D004214 ORTHO05D004963 7.5e-42 174.9 213 44.6
BcaB06g27319 Brassica carinata HOM05D004214 ORTHO05D004963 9.8e-42 174.5 192 49.0
Lj4P113T24 Lonicera japonica HOM05D004214 ORTHO05D004963 9.8e-42 174.5 140 61.4
Medtr6g012830 Medicago truncatula HOM05D004214 ORTHO05D004963 1.3e-41 174.1 195 44.1
Psat1g070480 Pisum sativum HOM05D004214 ORTHO05D004963 3.7e-41 172.6 160 49.4
TPR.G26214 Trifolium pratense HOM05D004214 ORTHO05D004963 4.9e-41 172.2 197 43.7
Lj2g0002943 Lotus japonicus HOM05D004214 ORTHO05D004963 6.3e-41 171.8 197 43.7
Os03g0168300 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 1.8e-40 170.2 193 44.6
VMungo0464G0566 Vigna mungo HOM05D004214 ORTHO05D004963 1.2e-39 167.5 198 43.9
Prupe.3G263500 Prunus persica HOM05D004214 ORTHO05D004963 3.5e-39 166.0 255 39.6
Lj3A352G14 Lonicera japonica HOM05D004214 ORTHO05D004963 4.5e-39 165.6 140 57.9
Zm00001eb402430 Zea mays HOM05D004214 ORTHO05D004963 4.5e-39 165.6 203 40.9
Glyma.19G025600 Glycine max HOM05D004214 ORTHO05D004963 1.7e-38 163.7 191 44.5
PGR083G1063 Punica granatum HOM05D004214 ORTHO05D004963 2.3e-38 163.3 193 43.5
QL02p084854 Quercus lobata HOM05D004214 ORTHO05D004963 8.6e-38 161.4 190 43.2
MD09G1055000 Malus domestica HOM05D004214 ORTHO05D004963 1.5e-37 160.6 260 36.2
Gohir.A07G206700 Gossypium hirsutum HOM05D004214 ORTHO05D004963 2.5e-37 159.8 99 70.7
Mapoly0033s0115 Marchantia polymorpha HOM05D004214 ORTHO05D004963 2.5e-37 159.8 192 39.6
Lj2g0001860 Lotus japonicus HOM05D004214 ORTHO05D004963 2.1e-36 156.8 139 50.4
FAN05G5298 Fragaria x ananassa HOM05D004214 ORTHO05D004963 4.7e-36 155.6 208 41.3
Zm00001eb328430 Zea mays HOM05D004214 ORTHO05D004963 8.0e-36 154.8 170 45.9
FvH4_6g48001 Fragaria vesca HOM05D004214 ORTHO05D004963 1.8e-35 153.7 216 39.8
ClCG09G017980 Citrullus lanatus HOM05D004214 ORTHO05D004963 4.0e-35 152.5 196 40.3
FvH4_6g48000 Fragaria vesca HOM05D004214 ORTHO05D004963 5.2e-35 152.1 208 40.4
CsaV3_5G038250 Cucumis sativus L. HOM05D004214 ORTHO05D004963 3.4e-34 149.4 224 40.2
FAN14G3700 Fragaria x ananassa HOM05D004214 ORTHO05D004963 3.4e-34 149.4 215 39.5
RcHm_v2.0_Chr2g0167291 Rosa chinensis HOM05D004214 ORTHO05D004963 3.4e-34 149.4 188 42.0
Os07g0633000 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 9.8e-34 147.9 171 46.8
RcHm_v2.0_Chr2g0167251 Rosa chinensis HOM05D004214 ORTHO05D004963 2.2e-33 146.7 160 42.5
FAN14G4990 Fragaria x ananassa HOM05D004214 ORTHO05D004963 4.9e-33 145.6 225 37.3
FAN09G1794 Fragaria x ananassa HOM05D004214 ORTHO05D004963 6.4e-33 145.2 220 39.5
Lj2g0019349 Lotus japonicus HOM05D004214 ORTHO05D004963 1.4e-32 144.1 196 39.8
Phvul.004G029700 Phaseolus vulgaris HOM05D004214 ORTHO05D004963 4.1e-32 142.5 197 42.1
MELO3C033594.2 Cucumis melo HOM05D004214 ORTHO05D004963 4.6e-31 139.0 220 35.5
TPR.G8805 Trifolium pratense HOM05D004214 ORTHO05D004963 1.0e-30 137.9 206 38.8
Psat1g071840 Pisum sativum HOM05D004214 ORTHO05D004963 1.7e-30 137.1 235 34.0
Ca_04848_v3 Cicer arietinum L. HOM05D004214 ORTHO05D004963 8.6e-30 134.8 209 35.4
RcHm_v2.0_Chr2g0167241 Rosa chinensis HOM05D004214 ORTHO05D004963 1.5e-29 134.0 194 39.2
C04p45950 Brassica napus HOM05D004214 ORTHO05D004963 3.3e-29 132.9 192 40.6
FAN02G2928 Fragaria x ananassa HOM05D004214 ORTHO05D004963 1.2e-28 131.0 191 39.3
Nitab4.5_0001591g0160 Nicotiana tabacum HOM05D004214 ORTHO05D004963 1.5e-26 124.0 229 35.4
CBR_g51334 Chara braunii HOM05D004214 ORTHO05D004963 3.4e-26 122.9 190 36.8
Gohir.D11G074550 Gossypium hirsutum HOM05D004214 ORTHO05D004963 1.7e-25 120.6 128 46.1
Gorai.007G080000 Gossypium raimondii HOM05D004214 ORTHO05D004963 2.2e-25 120.2 128 46.1
BolC4t26178H Brassica oleracea HOM05D004214 ORTHO05D004963 1.4e-24 117.5 78 67.9
ClCG10G015310 Citrullus lanatus HOM05D004214 ORTHO05D004963 3.5e-23 112.8 197 34.0
arahy.Tifrunner.gnm1.ann1.SU00NT Arachis hypogaea HOM05D004214 ORTHO05D004963 4.6e-23 112.5 196 34.7
Glyma.13G061800 Glycine max HOM05D004214 ORTHO05D004963 2.3e-22 110.2 133 39.8
MD09G1055400 Malus domestica HOM05D004214 ORTHO05D004963 1.2e-20 104.4 111 44.1
C06p18570 Brassica napus HOM05D004214 ORTHO05D004963 2.0e-18 97.1 72 61.1
Lj3A350G16 Lonicera japonica HOM05D004214 ORTHO05D004963 1.1e-16 91.3 189 34.4
PRCOL_00004285 Prasinoderma coloniale HOM05D004214 ORTHO05D004963 1.1e-16 91.3 177 31.6
Sabra17G0077200 Salix brachista HOM05D004214 ORTHO05D004963 7.1e-16 88.6 59 69.5
BraA07t29702Z Brassica rapa HOM05D004214 ORTHO05D004963 9.2e-16 88.2 62 66.1
CsaV3_3G041190 Cucumis sativus L. HOM05D004214 ORTHO05D004963 1.9e-13 80.5 199 25.6
Lj3A364T22 Lonicera japonica HOM05D004214 ORTHO05D004963 1.4e-11 74.3 79 45.6
Aa31LG9G16510 Aethionema arabicum HOM05D004214 ORTHO05D004963 5.2e-11 72.4 83 47.0
BolC6t37070H Brassica oleracea HOM05D004214 ORTHO05D004963 5.2e-11 72.4 54 59.3
MELO3C009848.2 Cucumis melo HOM05D004214 ORTHO05D004963 5.2e-11 72.4 149 28.9
BolC9t55376H Brassica oleracea HOM05D004214 ORTHO05D004963 8.9e-11 71.6 86 46.5
CBR_g46605 Chara braunii HOM05D004214 ORTHO05D004963 2.4e-08 63.5 121 32.2
Os10g0580600 Oryza sativa ssp. japonica HOM05D004214 ORTHO05D004963 6.6e-06 55.5 46 56.5


User provided reference genes

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