Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 7.7e-206 720.3 378 100.0
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 1.1e-191 673.3 387 93.8
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 1.1e-191 673.3 398 91.2
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 1.1e-191 673.3 398 91.2
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 3.1e-191 671.8 398 91.0
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 7.2e-188 660.6 398 89.7
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 8.0e-187 657.1 398 88.7
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 7.2e-180 634.0 398 85.2
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 2.3e-178 629.0 398 85.4
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 4.0e-178 628.2 398 84.4
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 6.8e-178 627.5 398 84.2
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 6.8e-178 627.5 398 84.7
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 8.8e-178 627.1 398 84.2
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 8.8e-178 627.1 398 83.2
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 8.8e-178 627.1 398 84.2
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 1.2e-177 626.7 398 85.2
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 1.5e-177 626.3 398 83.7
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 2.0e-177 625.9 397 83.9
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 2.6e-177 625.5 398 83.7
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 2.6e-177 625.5 398 83.7
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 3.4e-177 625.2 398 83.4
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 4.4e-177 624.8 398 83.4
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 5.7e-177 624.4 398 83.7
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 7.5e-177 624.0 398 82.9
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 9.8e-177 623.6 398 83.2
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.3e-176 623.2 398 84.4
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.7e-176 622.9 398 83.4
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.7e-176 622.9 398 83.4
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.2e-176 622.5 398 83.2
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 2.2e-176 622.5 398 83.7
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 3.7e-176 621.7 398 84.4
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.8e-176 621.3 398 82.9
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 4.8e-176 621.3 398 82.7
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 6.3e-176 620.9 398 83.2
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 8.3e-176 620.5 398 83.2
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 1.4e-175 619.8 398 82.7
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 1.8e-175 619.4 398 82.2
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 1.8e-175 619.4 398 83.9
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.8e-175 619.4 398 82.9
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 2.4e-175 619.0 398 83.4
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 3.1e-175 618.6 398 82.7
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 7.0e-175 617.5 398 82.4
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 7.0e-175 617.5 398 83.4
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 9.1e-175 617.1 398 82.2
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 1.2e-174 616.7 398 82.2
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 1.6e-174 616.3 398 82.7
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 2.0e-174 615.9 398 83.2
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 2.7e-174 615.5 399 82.7
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 5.9e-174 614.4 398 82.2
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 1.7e-173 612.8 398 83.4
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 2.9e-173 612.1 398 82.7
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 6.5e-173 610.9 401 81.8
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 8.5e-173 610.5 403 81.4
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 8.5e-173 610.5 398 81.2
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 1.5e-172 609.8 399 81.5
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.5e-172 609.8 399 81.5
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 1.9e-172 609.4 398 81.2
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 3.2e-172 608.6 398 81.7
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 4.2e-172 608.2 399 81.2
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 5.5e-172 607.8 398 80.7
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 5.5e-172 607.8 398 80.9
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 1.6e-171 606.3 398 81.4
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 2.1e-171 605.9 399 81.5
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 2.1e-171 605.9 398 81.2
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 2.7e-171 605.5 399 80.7
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 2.7e-171 605.5 398 81.4
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.7e-171 604.7 398 80.2
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.8e-170 602.8 398 80.2
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 2.3e-170 602.4 398 80.4
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 2.3e-170 602.4 398 80.7
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 3.4e-169 598.6 398 79.9
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 9.8e-169 597.0 406 79.6
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 2.4e-167 592.4 400 79.8
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 4.1e-167 591.7 398 79.6
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.6e-166 589.7 398 79.4
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.6e-166 589.7 398 79.4
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.6e-166 589.7 398 79.4
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 1.6e-166 589.7 398 79.6
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 4.5e-166 588.2 398 78.4
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 5.9e-166 587.8 398 78.9
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 5.9e-166 587.8 398 79.1
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 5.9e-166 587.8 398 79.1
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 5.9e-166 587.8 398 78.9
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 7.7e-166 587.4 398 78.6
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 1.0e-165 587.0 398 78.9
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 3.8e-165 585.1 398 80.2
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 5.0e-165 584.7 398 78.6
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 5.0e-165 584.7 398 78.6
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 5.0e-165 584.7 398 78.6
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 8.6e-165 583.9 477 69.2
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 2.5e-164 582.4 398 78.4
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 2.5e-164 582.4 398 78.4
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 2.5e-164 582.4 501 66.5
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 3.3e-164 582.0 398 77.9
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 4.3e-164 581.6 398 78.1
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 9.5e-164 580.5 398 79.9
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 2.8e-163 578.9 392 79.3
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 4.7e-163 578.2 398 78.4
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 6.1e-163 577.8 490 68.8
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 1.0e-162 577.0 398 78.6
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 2.3e-162 575.9 440 72.5
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.2e-161 573.5 402 77.4
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 3.7e-160 568.5 342 86.8
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.6e-158 563.1 439 73.6
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 1.7e-157 559.7 418 75.1
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 3.9e-157 558.5 437 72.8
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 1.2e-155 553.5 398 74.6
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 4.7e-155 551.6 398 74.1
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 4.0e-154 548.5 398 71.9
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.7e-152 543.1 368 80.4
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 2.2e-152 542.7 354 82.5
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 2.0e-150 536.2 354 81.1
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 2.7e-150 535.8 427 71.9
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 3.3e-148 528.9 398 70.1
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 5.6e-148 528.1 398 69.6
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 2.1e-147 526.2 397 69.0
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 1.3e-144 516.9 387 73.9
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 1.6e-134 483.4 398 69.8
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 3.3e-132 475.7 396 64.4
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 2.1e-131 473.0 272 90.4
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 1.1e-127 460.7 299 82.3
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 4.2e-127 458.8 398 66.1
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 4.0e-122 442.2 347 70.0
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 6.4e-120 434.9 419 62.1
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 8.7e-109 397.9 226 91.2
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 7.2e-95 351.7 394 49.7
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 4.5e-89 332.4 402 46.8
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 2.4e-82 310.1 401 46.6
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 2.9e-80 303.1 219 76.7
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 6.3e-75 285.4 214 76.2
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 9.4e-63 245.0 214 63.1
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.6e-54 217.6 150 79.3
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 6.1e-54 215.7 183 68.3
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.5e-52 211.1 150 76.7
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.4e-50 204.5 366 36.9
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 8.6e-40 168.7 205 44.4
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 5.2e-37 159.5 232 48.7
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 9.2e-34 148.7 146 59.6
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 4.9e-27 126.3 94 73.4
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 4.9e-27 126.3 94 73.4
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 1.1e-15 88.6 49 79.6
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 8.7e-08 62.4 73 56.2
Thecc.05G196500 Theobroma cacao HOM05D001185 ORTHO05D003777 9.6e-07 58.9 353 24.4
PSO339G0818 Papaver somniferum HOM05D001185 ORTHO05D003777 2.8e-06 57.4 203 28.1
PSO170G5175 Papaver somniferum HOM05D001185 ORTHO05D003777 3.6e-06 57.0 353 23.5
Lj2A569G64 Lonicera japonica HOM05D001185 ORTHO05D003777 4.8e-06 56.6 356 23.0
PSO700G0370 Papaver somniferum HOM05D001185 ORTHO05D003777 4.8e-06 56.6 353 24.1
Lalb_Chr07g0184681 Lupinus albus HOM05D001185 ORTHO05D003777 6.2e-06 56.2 352 25.6


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