Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009975g0010 Nicotiana tabacum HOM05D006178 ORTHO05D007504 2.3e-148 528.9 266 100.0
Nitab4.5_0000018g0160 Nicotiana tabacum HOM05D006178 ORTHO05D007504 7.5e-123 444.1 264 87.9
CAN.G511.14 Capsicum annuum HOM05D006178 ORTHO05D007504 5.0e-95 351.7 242 73.6
Sopen07g004780 Solanum pennellii HOM05D006178 ORTHO05D007504 2.5e-94 349.4 246 72.8
PGSC0003DMG400028747 Solanum tuberosum HOM05D006178 ORTHO05D007504 4.7e-93 345.1 242 73.1
Solyc07g008850.3 Solanum lycopersicum HOM05D006178 ORTHO05D007504 1.8e-92 343.2 242 72.7
Peaxi162Scf00937g00336 Petunia axillaris HOM05D006178 ORTHO05D007504 6.2e-85 318.2 242 67.8
Dinv07729 Davidia involucrata HOM05D006178 ORTHO05D007504 7.3e-78 294.7 240 61.7
Actinidia38440 Actinidia chinensis HOM05D006178 ORTHO05D007504 1.7e-74 283.5 240 60.4
Cc11_g07280 Coffea canephora HOM05D006178 ORTHO05D007504 6.0e-72 275.0 240 56.2
CiPaw.05G188700 Carya illinoinensis HOM05D006178 ORTHO05D007504 7.8e-72 274.6 240 57.1
TWI74G1561 Tripterygium wilfordii HOM05D006178 ORTHO05D007504 1.3e-71 273.9 240 58.3
QL03p035908 Quercus lobata HOM05D006178 ORTHO05D007504 3.9e-71 272.3 248 57.3
Atru.chr11.922 Acer truncatum HOM05D006178 ORTHO05D007504 5.6e-70 268.5 242 57.9
GSVIVG01011660001 Vitis vinifera HOM05D006178 ORTHO05D007504 7.3e-70 268.1 240 57.1
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 1.6e-69 266.9 231 58.9
Haze_10879 Corylus avellana HOM05D006178 ORTHO05D007504 2.1e-69 266.5 240 55.0
Sed0021590 Sechium edule HOM05D006178 ORTHO05D007504 6.2e-69 265.0 248 53.6
Duzib251G0568 Durio zibethinus HOM05D006178 ORTHO05D007504 1.1e-68 264.2 240 58.3
Thecc.02G292800 Theobroma cacao HOM05D006178 ORTHO05D007504 1.4e-68 263.8 240 57.9
arahy.Tifrunner.gnm1.ann1.56CUD8 Arachis hypogaea HOM05D006178 ORTHO05D007504 1.8e-68 263.5 240 55.4
Psat6g046400 Pisum sativum HOM05D006178 ORTHO05D007504 3.1e-68 262.7 240 55.8
FvH4_4g33550 Fragaria vesca HOM05D006178 ORTHO05D007504 4.0e-68 262.3 240 56.2
FAN07G2930 Fragaria x ananassa HOM05D006178 ORTHO05D007504 9.0e-68 261.2 240 55.4
Hma1.2p1_0277F.1_g111690 Hydrangea macrophylla HOM05D006178 ORTHO05D007504 9.0e-68 261.2 241 55.2
Lj2g0017740 Lotus japonicus HOM05D006178 ORTHO05D007504 9.0e-68 261.2 240 55.4
Prupe.1G333400 Prunus persica HOM05D006178 ORTHO05D007504 9.0e-68 261.2 233 56.7
arahy.Tifrunner.gnm1.ann1.M99K8C Arachis hypogaea HOM05D006178 ORTHO05D007504 1.5e-67 260.4 240 55.0
Oeu044010.1 Olea europaea HOM05D006178 ORTHO05D007504 1.5e-67 260.4 230 59.1
MD13G1020300 Malus domestica HOM05D006178 ORTHO05D007504 3.4e-67 259.2 240 55.4
Sc04g0008610 Simmondsia chinensis HOM05D006178 ORTHO05D007504 4.4e-67 258.8 242 57.0
CsaV3_5G015780 Cucumis sativus L. HOM05D006178 ORTHO05D007504 5.8e-67 258.5 240 54.2
TPR.G36937 Trifolium pratense HOM05D006178 ORTHO05D007504 7.6e-67 258.1 240 54.2
MELO3C016656.2 Cucumis melo HOM05D006178 ORTHO05D007504 9.9e-67 257.7 240 54.2
Glyma.02G085100 Glycine max HOM05D006178 ORTHO05D007504 9.9e-67 257.7 240 55.4
Lsat_1_v5_gn_3_53481 Lactuca sativa HOM05D006178 ORTHO05D007504 9.9e-67 257.7 242 55.4
COL.COLO4_16591 Corchorus olitorius HOM05D006178 ORTHO05D007504 1.3e-66 257.3 240 55.8
EL10Ac2g02672 Beta vulgaris HOM05D006178 ORTHO05D007504 2.2e-66 256.5 240 55.4
FAN12G1191 Fragaria x ananassa HOM05D006178 ORTHO05D007504 3.8e-66 255.8 251 53.0
FAN22G2090 Fragaria x ananassa HOM05D006178 ORTHO05D007504 3.8e-66 255.8 251 53.0
Gohir.A01G146700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 6.4e-66 255.0 240 56.7
Migut.E00482 Erythranthe guttata HOM05D006178 ORTHO05D007504 1.1e-65 254.2 240 57.9
Gohir.D01G139900 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.1e-65 254.2 240 56.7
Gorai.002G172000 Gossypium raimondii HOM05D006178 ORTHO05D007504 1.1e-65 254.2 240 56.7
Hund24927 Selenicereus undatus HOM05D006178 ORTHO05D007504 1.1e-65 254.2 297 47.8
FAN17G1905 Fragaria x ananassa HOM05D006178 ORTHO05D007504 1.4e-65 253.8 250 52.4
Medtr1g032430 Medicago truncatula HOM05D006178 ORTHO05D007504 1.9e-65 253.4 240 53.8
Eucgr.B02675 Eucalyptus grandis HOM05D006178 ORTHO05D007504 2.4e-65 253.1 240 55.8
Ah.02g128010 Amaranthus hybridus HOM05D006178 ORTHO05D007504 3.2e-65 252.7 240 54.6
DCAR_007330 Daucus carota HOM05D006178 ORTHO05D007504 3.2e-65 252.7 240 54.6
SalBow2G2905 Salvia bowleyana HOM05D006178 ORTHO05D007504 4.2e-65 252.3 241 54.4
ClCG09G011820 Citrullus lanatus HOM05D006178 ORTHO05D007504 1.2e-64 250.8 246 52.8
Ciclev10015964m.g Citrus clementina HOM05D006178 ORTHO05D007504 1.2e-64 250.8 242 56.2
ECA246G2474 Erigeron canadensis HOM05D006178 ORTHO05D007504 1.2e-64 250.8 242 54.5
CANSAT01G0234 Cannabis sativa HOM05D006178 ORTHO05D007504 2.1e-64 250.0 247 55.1
AUR62014248 Chenopodium quinoa HOM05D006178 ORTHO05D007504 7.8e-64 248.1 240 52.1
HanXRQChr15g0476731 Helianthus annuus HOM05D006178 ORTHO05D007504 1.3e-63 247.3 239 53.6
CSS0005024 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 1.7e-63 246.9 183 68.3
AUR62038473 Chenopodium quinoa HOM05D006178 ORTHO05D007504 3.0e-63 246.1 240 51.7
CSS0001732 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 8.7e-63 244.6 182 68.1
PSO017G4246 Papaver somniferum HOM05D006178 ORTHO05D007504 1.1e-62 244.2 241 53.9
Lalb_Chr17g0338441 Lupinus albus HOM05D006178 ORTHO05D007504 2.5e-62 243.0 246 52.8
PSO478G4000 Papaver somniferum HOM05D006178 ORTHO05D007504 4.3e-62 242.3 241 53.1
Ca_12542_v3 Cicer arietinum L. HOM05D006178 ORTHO05D007504 7.3e-62 241.5 240 52.5
Manes.15G134200 Manihot esculenta HOM05D006178 ORTHO05D007504 6.2e-61 238.4 245 52.7
Potri.010G106400 Populus trichocarpa HOM05D006178 ORTHO05D007504 6.2e-61 238.4 241 53.9
Thhalv10007963m.g Eutrema salsugineum HOM05D006178 ORTHO05D007504 3.1e-60 236.1 245 49.8
THA.LOC104821906 Tarenaya hassleriana HOM05D006178 ORTHO05D007504 9.0e-60 234.6 244 51.6
Cpa.g.sc2.193 Carica papaya HOM05D006178 ORTHO05D007504 2.0e-59 233.4 241 53.5
BcaC01g01670 Brassica carinata HOM05D006178 ORTHO05D007504 5.8e-59 231.9 241 50.6
BraA08t34624Z Brassica rapa HOM05D006178 ORTHO05D007504 5.8e-59 231.9 240 50.4
A08p26780 Brassica napus HOM05D006178 ORTHO05D007504 9.9e-59 231.1 245 49.4
Aa31LG7G9330 Aethionema arabicum HOM05D006178 ORTHO05D007504 1.3e-58 230.7 247 50.6
Phvul.003G019200 Phaseolus vulgaris HOM05D006178 ORTHO05D007504 1.3e-58 230.7 186 61.8
Sp1g23080 Schrenkiella parvula HOM05D006178 ORTHO05D007504 1.3e-58 230.7 258 48.4
C03p73180 Brassica napus HOM05D006178 ORTHO05D007504 1.7e-58 230.3 242 50.4
BolC3t19616H Brassica oleracea HOM05D006178 ORTHO05D007504 1.7e-58 230.3 242 50.4
AT1G24793 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.1e-57 227.6 240 50.4
AT1G25054 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.1e-57 227.6 240 50.4
AT1G25145 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.1e-57 227.6 240 50.4
AT1G25210 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.1e-57 227.6 240 50.4
Carub.0001s2539 Capsella rubella HOM05D006178 ORTHO05D007504 1.1e-57 227.6 241 50.6
AL1G40190 Arabidopsis lyrata HOM05D006178 ORTHO05D007504 2.4e-57 226.5 240 50.8
BcaB03g12042 Brassica carinata HOM05D006178 ORTHO05D007504 3.2e-57 226.1 236 50.0
Gohir.D08G117400 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.9e-54 216.9 185 60.0
Gorai.001G151600 Gossypium raimondii HOM05D006178 ORTHO05D007504 5.6e-54 215.3 180 60.6
Gohir.D10G193800 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.3e-53 214.2 180 60.6
Gohir.D13G135551 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.6e-53 213.8 185 58.9
Gohir.D07G139600 Gossypium hirsutum HOM05D006178 ORTHO05D007504 2.1e-53 213.4 180 60.0
Gorai.010G050600 Gossypium raimondii HOM05D006178 ORTHO05D007504 2.1e-53 213.4 180 60.0
MBI13_g29562_MAGBIO Magnolia biondii HOM05D006178 ORTHO05D007504 3.1e-52 209.5 248 50.8
TAR629G3300 Trochodendron aralioides HOM05D006178 ORTHO05D007504 5.8e-51 205.3 184 56.0
ATR0753G153 Amborella trichopoda HOM05D006178 ORTHO05D007504 1.7e-50 203.8 238 46.6
HPP92_013128 Vanilla planifolia HOM05D006178 ORTHO05D007504 4.9e-50 202.2 238 47.5
vmacro00552 Vaccinium macrocarpon HOM05D006178 ORTHO05D007504 1.1e-49 201.1 240 50.4
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 4.2e-49 199.1 239 47.7
unitig_22.g5599 Utricularia gibba HOM05D000369 ORTHO05D000253 5.5e-49 198.7 242 51.2
Gohir.D11G251901 Gossypium hirsutum HOM05D006178 ORTHO05D007504 3.0e-47 193.0 180 57.8
Aqoxy3G00007 Aquilegia oxysepala HOM05D006178 ORTHO05D007504 3.9e-47 192.6 254 45.3
Os03g0223900 Oryza sativa ssp. japonica HOM05D006178 ORTHO05D007504 2.8e-45 186.4 243 44.4
Sabra10G0077800 Salix brachista HOM05D006178 ORTHO05D007504 6.2e-45 185.3 207 50.2
Gorai.005G149500 Gossypium raimondii HOM05D006178 ORTHO05D007504 2.2e-42 176.8 156 58.3
SGA_v2.0_scaffold23G10206 Striga asiatica HOM05D006178 ORTHO05D007504 6.5e-42 175.3 218 46.8
Mapoly0012s0127 Marchantia polymorpha HOM05D006178 ORTHO05D007504 5.5e-41 172.2 243 42.8
Pp3c3_1850 Physcomitrium patens HOM05D006178 ORTHO05D007504 2.1e-40 170.2 247 42.1
Gorai.005G145500 Gossypium raimondii HOM05D006178 ORTHO05D007504 3.0e-39 166.4 183 50.8
Zm00001eb009130 Zea mays HOM05D006178 ORTHO05D007504 2.5e-38 163.3 233 42.5
SEGI_10880 Sequoiadendron giganteum HOM05D006178 ORTHO05D007504 8.2e-37 158.3 184 45.1
AagrBONN_evm.TU.Sc2ySwM_340.423 Anthoceros agrestis HOM05D006178 ORTHO05D007504 1.3e-34 151.0 198 42.9
RcHm_v2.0_Chr7g0235121 Rosa chinensis HOM05D006178 ORTHO05D007504 2.1e-32 143.7 147 48.3
Gohir.D11G228700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.1e-30 137.9 105 61.9
Gorai.007G245600 Gossypium raimondii HOM05D006178 ORTHO05D007504 4.3e-30 136.0 105 61.0
CARHR026360 Cardamine hirsuta HOM05D006178 ORTHO05D007504 2.2e-29 133.7 109 63.3
Gorai.009G391300 Gossypium raimondii HOM05D006178 ORTHO05D007504 1.4e-28 131.0 95 64.2
SMO232G0119 Selaginella moellendorffii HOM05D006178 ORTHO05D007504 2.9e-26 123.2 237 38.4
Nn3g18364 Nelumbo nucifera HOM05D006178 ORTHO05D007504 8.5e-26 121.7 105 56.2
MCO09G291 Micromonas commoda HOM05D006178 ORTHO05D007504 1.0e-23 114.8 222 36.5
HPP92_013158 Vanilla planifolia HOM05D006178 ORTHO05D007504 1.1e-22 111.3 150 42.0
CBR_g12524 Chara braunii HOM05D006178 ORTHO05D007504 3.1e-20 103.2 252 30.6
Glyma.13G368200 Glycine max HOM05D006178 ORTHO05D007504 1.1e-17 94.7 85 55.3
Glyma.13G258800 Glycine max HOM05D006178 ORTHO05D007504 1.4e-17 94.4 78 57.7
PRCOL_00001866 Prasinoderma coloniale HOM05D006178 ORTHO05D007504 1.4e-15 87.8 234 31.6
Ca_29306_v3 Cicer arietinum L. HOM05D001616 ORTHO05D007504 1.1e-12 78.2 172 32.6
Cre16.g653350 Chlamydomonas reinhardtii HOM05D006178 ORTHO05D007504 1.6e-11 74.3 203 28.6
MCO05G527 Micromonas commoda HOM05D014289 ORTHO05D018957 3.0e-07 60.1 101 39.6


User provided reference genes

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