Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009966g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-140 503.1 287 100.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.4e-105 385.6 355 72.1
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.9e-65 251.9 217 64.5
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.7e-62 243.0 217 63.1
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 4.2e-47 192.6 348 37.4
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-44 184.1 242 43.8
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.4e-44 182.6 168 58.9
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.3e-43 178.7 215 49.3
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.3e-43 178.7 217 47.0
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-39 167.9 184 55.4
Nitab4.5_0008563g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.1e-38 163.7 127 68.5
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-36 157.1 194 51.5
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-34 151.4 231 39.0
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.9e-33 145.6 158 54.4
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 3.8e-32 142.9 153 45.1
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-31 140.2 157 52.9
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.3e-29 133.7 209 42.1
Nitab4.5_0004672g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.2e-29 132.5 147 49.7
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 4.4e-28 129.4 205 36.1
Nitab4.5_0007579g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-27 127.5 91 72.5
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 2.8e-27 126.7 205 35.6
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.7e-27 126.3 124 59.7
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-25 120.9 106 62.3
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.8e-24 116.3 211 31.3
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.9e-23 114.0 181 34.8
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.1e-22 109.0 187 34.8
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 1.4e-21 107.8 210 33.8
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.0e-21 106.7 342 25.7
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 4.0e-21 106.3 232 28.9
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 8.9e-21 105.1 240 29.6
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-20 104.4 179 35.2
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.4e-20 103.2 237 28.7
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 9.8e-20 101.7 223 31.8
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-18 98.2 236 30.9
Nitab4.5_0001158g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.0e-18 95.5 142 54.9
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-17 94.0 63 87.3
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-17 94.0 81 60.5
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.5e-17 93.2 169 33.7
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 1.7e-16 90.9 215 29.8
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 1.7e-16 90.9 148 35.1
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 2.3e-16 90.5 147 34.7
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 2.3e-16 90.5 227 29.5
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.9e-16 90.1 172 33.1
Nitab4.5_0002227g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.0e-16 89.4 142 42.3
Solyc07g039615.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 6.6e-16 89.0 123 41.5
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 2.5e-15 87.0 241 28.2
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 3.3e-15 86.7 224 26.8
Nitab4.5_0007527g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.6e-15 85.9 141 32.6
Lj2g0015436 Lotus japonicus HOM05D002954 ORTHO05D010308 7.3e-15 85.5 161 28.0
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 1.2e-14 84.7 240 27.1
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.2e-14 84.7 240 27.1
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 1.4e-13 81.3 197 28.9
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 1.4e-13 81.3 163 28.8
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 1.8e-13 80.9 224 26.8
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 2.3e-13 80.5 160 31.2
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 3.1e-13 80.1 224 27.7
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 5.2e-13 79.3 176 30.1
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.2e-12 78.2 225 27.1
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 1.5e-12 77.8 222 25.7
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 2.0e-12 77.4 171 28.1
Nitab4.5_0000154g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-11 74.3 144 30.6
Peaxi162Scf00914g00054 Petunia axillaris HOM05D002954 ORTHO05D003353 1.7e-11 74.3 165 32.7
Nitab4.5_0000358g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.4e-11 72.4 85 40.0
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 6.4e-11 72.4 179 25.7
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 8.3e-11 72.0 235 26.0
Nitab4.5_0006167g0010 Nicotiana tabacum HOM05D002954 ORTHO05D283777 8.3e-11 72.0 135 67.4
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 1.1e-10 71.6 163 27.6
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 2.4e-10 70.5 239 25.9
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 5.4e-10 69.3 150 30.7
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 7.0e-10 68.9 217 27.2
Lj1g0024925 Lotus japonicus HOM05D002954 ORTHO05D003353 3.5e-09 66.6 161 28.0
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 6.0e-09 65.9 223 24.7
Nitab4.5_0000386g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-08 65.1 89 38.2
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 1.3e-08 64.7 134 32.8
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 3.0e-08 63.5 175 27.4
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.0e-08 63.5 87 40.2
Nitab4.5_0001404g0070 Nicotiana tabacum HOM05D002954 ORTHO05D015034 6.6e-08 62.4 66 43.9
Nitab4.5_0010215g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.6e-08 62.4 84 41.7
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 6.6e-08 62.4 133 27.1
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 8.6e-08 62.0 208 26.0
PGSC0003DMG400040446 Solanum tuberosum HOM05D002954 ORTHO05D003353 3.3e-07 60.1 155 29.0
A09p53580 Brassica napus HOM05D008309 ORTHO05D010308 9.5e-07 58.5 159 27.0
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 58.2 163 28.2
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 1.2e-06 58.2 68 39.7
C03p39230 Brassica napus HOM05D008309 ORTHO05D010308 2.1e-06 57.4 155 27.1
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 4.7e-06 56.2 112 33.0
Lj6g0018783 Lotus japonicus HOM05D002954 ORTHO05D000385 4.7e-06 56.2 110 32.7
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-06 56.2 117 28.2
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 8.0e-06 55.5 200 24.5
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 8.0e-06 55.5 166 24.7


User provided reference genes

Program Settings