Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009871g0010 Nicotiana tabacum HOM05D003674 ORTHO05D004226 6.7e-26 119.8 55 100.0
Nitab4.5_0000638g0270 Nicotiana tabacum HOM05D003674 ORTHO05D004226 5.8e-22 106.7 50 96.0
Peaxi162Scf00132g00118 Petunia axillaris HOM05D003674 ORTHO05D004226 3.3e-17 90.9 50 84.0
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 5.5e-12 73.6 50 68.0
Nitab4.5_0000512g0010 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.6e-11 72.0 50 66.0
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 1.6e-11 72.0 50 66.0
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 6.1e-11 70.1 49 65.3
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 6.1e-11 70.1 49 65.3
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 2.3e-10 68.2 49 65.3
PGSC0003DMG400018342 Solanum tuberosum HOM05D003674 ORTHO05D004226 1.9e-09 65.1 46 63.0
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.2e-08 61.6 48 56.2
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.8e-08 61.2 48 56.2
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 8.2e-08 59.7 48 56.2
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 1.4e-07 58.9 48 58.3
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 1.8e-07 58.5 48 54.2
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 2.4e-07 58.2 49 57.1
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 2.4e-07 58.2 49 53.1
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 2.4e-07 58.2 48 50.0
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 3.1e-07 57.8 48 54.2
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 3.1e-07 57.8 48 60.4
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 3.1e-07 57.8 48 50.0
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 5.3e-07 57.0 48 50.0
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 5.3e-07 57.0 49 51.0
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 5.3e-07 57.0 48 52.1
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 6.9e-07 56.6 48 52.1
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 6.9e-07 56.6 48 52.1
CDE06G1319 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 6.9e-07 56.6 48 54.2
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 6.9e-07 56.6 48 54.2
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 6.9e-07 56.6 49 49.0
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 6.9e-07 56.6 48 52.1
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 9.0e-07 56.2 49 49.0
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 9.0e-07 56.2 49 49.0
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 9.0e-07 56.2 49 55.1
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 9.0e-07 56.2 48 52.1
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 9.0e-07 56.2 48 58.3
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 1.2e-06 55.8 48 52.1
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 1.2e-06 55.8 49 53.1
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 1.2e-06 55.8 48 58.3
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 1.5e-06 55.5 49 55.1
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 1.5e-06 55.5 49 44.9
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 2.0e-06 55.1 49 49.0
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 2.0e-06 55.1 48 50.0
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 2.0e-06 55.1 49 51.0
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 53.1
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 53.1
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 53.1
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 53.1
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 53.1
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 53.1
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 53.1
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 49.0
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 2.6e-06 54.7 48 56.2
Gohir.D02G179632 Gossypium hirsutum HOM05D003674 ORTHO05D004226 2.6e-06 54.7 48 56.2
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 2.6e-06 54.7 48 56.2
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 2.6e-06 54.7 50 52.0
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 2.6e-06 54.7 49 49.0
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 3.4e-06 54.3 48 54.2
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 3.4e-06 54.3 49 46.9
SHI10407 Sapria himalayana HOM05D003674 ORTHO05D004226 3.4e-06 54.3 48 52.1
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 3.4e-06 54.3 49 53.1
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 3.4e-06 54.3 48 50.0
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 3.4e-06 54.3 48 52.1
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 3.4e-06 54.3 48 50.0
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 4.5e-06 53.9 49 49.0
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 4.5e-06 53.9 48 50.0
CiPaw.04G126100 Carya illinoinensis HOM05D003674 ORTHO05D004226 5.9e-06 53.5 49 51.0
vmacro12304 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 5.9e-06 53.5 48 47.9
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 7.7e-06 53.1 50 46.0
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 7.7e-06 53.1 48 47.9
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 7.7e-06 53.1 49 51.0
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 7.7e-06 53.1 48 45.8
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 1.0e-05 52.8 49 49.0
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 1.0e-05 52.8 49 49.0
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 1.0e-05 52.8 50 52.0


User provided reference genes

Program Settings