Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009646g0070 Nicotiana tabacum HOM05D005561 ORTHO05D006834 1.6e-191 672.5 336 100.0
Nitab4.5_0000383g0380 Nicotiana tabacum HOM05D005561 ORTHO05D006834 2.1e-159 565.8 580 56.9
Nitab4.5_0001208g0070 Nicotiana tabacum HOM05D005561 ORTHO05D006834 9.0e-158 560.5 580 56.6
PGSC0003DMG400009989 Solanum tuberosum HOM05D005561 ORTHO05D006834 1.5e-144 516.5 580 50.7
Sopen04g036210 Solanum pennellii HOM05D005561 ORTHO05D006834 2.8e-143 512.3 580 50.2
Solyc04g082580.3 Solanum lycopersicum HOM05D005561 ORTHO05D006834 4.8e-143 511.5 580 50.2
CAN.G311.134 Capsicum annuum HOM05D005561 ORTHO05D006834 2.0e-141 506.1 578 50.3
Peaxi162Scf00680g00110 Petunia axillaris HOM05D005561 ORTHO05D006834 2.6e-120 436.0 519 47.8
Dinv31967 Davidia involucrata HOM05D005561 ORTHO05D006834 6.3e-119 431.4 582 43.6
CSS0019163 Camellia sinensis var. sinensis HOM05D005561 ORTHO05D006834 1.4e-118 430.3 581 43.2
Potri.002G007700 Populus trichocarpa HOM05D005561 ORTHO05D006834 4.5e-117 425.2 583 42.2
Prupe.5G009000 Prunus persica HOM05D005561 ORTHO05D006834 5.9e-117 424.9 581 41.8
QL02p015136 Quercus lobata HOM05D005561 ORTHO05D006834 1.0e-116 424.1 577 41.6
Cfa014114 Carpinus fangiana HOM05D005561 ORTHO05D006834 2.9e-116 422.5 581 42.7
Sabra05G0196600 Salix brachista HOM05D005561 ORTHO05D006834 2.9e-116 422.5 582 41.6
Haze_22832 Corylus avellana HOM05D005561 ORTHO05D006834 6.5e-116 421.4 581 42.5
Potri.005G253500 Populus trichocarpa HOM05D005561 ORTHO05D006834 6.5e-116 421.4 582 41.8
COL.COLO4_35541 Corchorus olitorius HOM05D005561 ORTHO05D006834 1.1e-115 420.6 581 41.7
Manes.05G124800 Manihot esculenta HOM05D005561 ORTHO05D006834 3.2e-115 419.1 582 41.6
Lj4C7T6 Lonicera japonica HOM05D005561 ORTHO05D006834 3.6e-114 415.6 581 42.2
Duzib041G0482 Durio zibethinus HOM05D005561 ORTHO05D006834 4.7e-114 415.2 581 41.0
Cpa.g.sc26.163 Carica papaya HOM05D005561 ORTHO05D006834 3.0e-113 412.5 568 41.5
Rhsim06G0005100 Rhododendron simsii HOM05D005561 ORTHO05D006834 5.2e-113 411.8 581 41.7
Cc10_g00480 Coffea canephora HOM05D005561 ORTHO05D006834 8.8e-113 411.0 576 43.4
Thecc.08G062600 Theobroma cacao HOM05D005561 ORTHO05D006834 1.2e-112 410.6 581 40.6
MD06G1007100 Malus domestica HOM05D005561 ORTHO05D006834 2.0e-112 409.8 581 40.6
vmacro21786 Vaccinium macrocarpon HOM05D005561 ORTHO05D006834 2.0e-112 409.8 581 41.8
CSS0027936 Camellia sinensis var. sinensis HOM05D005561 ORTHO05D006834 5.7e-112 408.3 574 42.2
TWI56G0057 Tripterygium wilfordii HOM05D005561 ORTHO05D006834 7.5e-112 407.9 580 41.6
arahy.Tifrunner.gnm1.ann1.NG9QQJ Arachis hypogaea HOM05D005561 ORTHO05D006834 1.7e-111 406.8 580 41.7
Gohir.A01G103500 Gossypium hirsutum HOM05D005561 ORTHO05D006834 3.7e-111 405.6 573 40.8
Gohir.D01G088800 Gossypium hirsutum HOM05D005561 ORTHO05D006834 6.3e-111 404.8 581 40.8
Gorai.002G114500 Gossypium raimondii HOM05D005561 ORTHO05D006834 6.3e-111 404.8 581 40.8
Lj1g0007073 Lotus japonicus HOM05D005561 ORTHO05D006834 8.3e-111 404.4 580 41.2
CANSAT78G2155 Cannabis sativa HOM05D005561 ORTHO05D006834 1.4e-110 403.7 579 40.8
CiPaw.07G135900 Carya illinoinensis HOM05D005561 ORTHO05D006834 3.1e-110 402.5 581 41.0
TWI36G1622 Tripterygium wilfordii HOM05D005561 ORTHO05D006834 3.5e-109 399.1 581 40.4
Ciclev10000678m.g Citrus clementina HOM05D005561 ORTHO05D006834 5.9e-109 398.3 585 41.2
RcHm_v2.0_Chr7g0215931 Rosa chinensis HOM05D005561 ORTHO05D006834 1.0e-108 397.5 581 39.8
Duzib093G0247 Durio zibethinus HOM05D005561 ORTHO05D006834 3.8e-108 395.6 581 39.4
EL10Ac1g01911 Beta vulgaris HOM05D005561 ORTHO05D006834 1.5e-107 393.7 582 40.2
Lalb_Chr11g0061481 Lupinus albus HOM05D005561 ORTHO05D006834 1.9e-107 393.3 587 42.9
Glyma.04G016300 Glycine max HOM05D005561 ORTHO05D006834 4.2e-107 392.1 581 40.3
MD00G1113700 Malus domestica HOM05D005561 ORTHO05D006834 4.2e-107 392.1 582 39.5
Psat5g009720 Pisum sativum HOM05D005561 ORTHO05D006834 7.2e-107 391.3 589 40.9
Eucgr.F01790 Eucalyptus grandis HOM05D005561 ORTHO05D006834 2.1e-106 389.8 576 39.6
FAN18G1577 Fragaria x ananassa HOM05D005561 ORTHO05D006834 2.1e-106 389.8 577 39.7
Duzib116G0146 Durio zibethinus HOM05D005561 ORTHO05D006834 2.8e-106 389.4 581 39.6
THA.LOC104801947 Tarenaya hassleriana HOM05D005561 ORTHO05D006834 2.8e-106 389.4 577 39.5
AUR62035143 Chenopodium quinoa HOM05D005561 ORTHO05D006834 3.6e-106 389.0 582 39.5
TPR.G38189 Trifolium pratense HOM05D005561 ORTHO05D006834 3.6e-106 389.0 586 42.2
AUR62042576 Chenopodium quinoa HOM05D005561 ORTHO05D006834 1.4e-105 387.1 581 39.4
VMungo1309G3038 Vigna mungo HOM05D005561 ORTHO05D006834 1.8e-105 386.7 581 39.9
Phvul.009G012500 Phaseolus vulgaris HOM05D005561 ORTHO05D006834 2.3e-105 386.3 581 39.8
DCAR_016786 Daucus carota HOM05D005561 ORTHO05D006834 3.0e-105 386.0 581 39.4
FAN13G3253 Fragaria x ananassa HOM05D005561 ORTHO05D006834 6.8e-105 384.8 581 39.6
Ah.11g041760 Amaranthus hybridus HOM05D005561 ORTHO05D006834 8.9e-105 384.4 574 39.5
ClCG08G009280 Citrullus lanatus HOM05D005561 ORTHO05D006834 1.5e-104 383.6 572 39.0
Glyma.06G016400 Glycine max HOM05D005561 ORTHO05D006834 2.0e-104 383.3 581 39.6
MELO3C026526.2 Cucumis melo HOM05D005561 ORTHO05D006834 4.4e-104 382.1 572 38.8
Medtr3g115870 Medicago truncatula HOM05D005561 ORTHO05D006834 7.5e-104 381.3 585 39.8
FAN04G1314 Fragaria x ananassa HOM05D005561 ORTHO05D006834 1.7e-103 380.2 566 39.6
CsaV3_6G031410 Cucumis sativus L. HOM05D005561 ORTHO05D006834 2.2e-103 379.8 572 38.8
Lalb_Chr23g0265661 Lupinus albus HOM05D005561 ORTHO05D006834 6.3e-103 378.3 584 40.2
MSTRG.22092 Avicennia marina HOM05D005561 ORTHO05D006834 8.3e-103 377.9 581 38.7
Ca_15401_v3 Cicer arietinum L. HOM05D005561 ORTHO05D006834 5.4e-102 375.2 586 41.3
Sed0010562 Sechium edule HOM05D005561 ORTHO05D006834 1.2e-101 374.0 583 38.1
ECA232G0027 Erigeron canadensis HOM05D005561 ORTHO05D006834 3.5e-101 372.5 569 38.7
FvH4_5g25640 Fragaria vesca HOM05D005561 ORTHO05D006834 1.3e-100 370.5 556 39.2
Sabra02G0006100 Salix brachista HOM05D005561 ORTHO05D006834 1.7e-100 370.2 544 40.3
FAN08G1213 Fragaria x ananassa HOM05D005561 ORTHO05D006834 3.9e-100 369.0 566 38.7
PGR083G0762 Punica granatum HOM05D005561 ORTHO05D006834 1.2e-98 364.0 579 37.8
HanXRQChr15g0492491 Helianthus annuus HOM05D005561 ORTHO05D006834 8.0e-98 361.3 572 38.3
Nn5g31005 Nelumbo nucifera HOM05D005561 ORTHO05D006834 6.8e-97 358.2 580 37.6
Migut.N02971 Erythranthe guttata HOM05D005561 ORTHO05D006834 1.2e-96 357.5 580 38.6
SalBow1G8439 Salvia bowleyana HOM05D005561 ORTHO05D006834 3.4e-96 355.9 585 37.3
SalBow7G4605 Salvia bowleyana HOM05D005561 ORTHO05D006834 3.4e-96 355.9 585 37.3
Sc02g0009190 Simmondsia chinensis HOM05D005561 ORTHO05D006834 5.8e-96 355.1 581 37.9
MSTRG.992 Avicennia marina HOM05D005561 ORTHO05D006834 7.5e-96 354.8 533 39.0
GSVIVG01013397001 Vitis vinifera HOM05D005561 ORTHO05D006834 1.9e-94 350.1 406 50.0
Oeu016877.1 Olea europaea HOM05D005561 ORTHO05D006834 1.6e-93 347.1 549 38.3
HanXRQChr05g0144831 Helianthus annuus HOM05D005561 ORTHO05D006834 5.0e-92 342.0 572 37.1
Lsat_1_v5_gn_9_45721 Lactuca sativa HOM05D005561 ORTHO05D006834 6.2e-90 335.1 584 36.5
Thhalv10003171m.g Eutrema salsugineum HOM05D005561 ORTHO05D006834 6.8e-89 331.6 569 35.9
Aa31LG9G12500 Aethionema arabicum HOM05D005561 ORTHO05D006834 3.7e-87 325.9 580 36.0
Aqoxy5G00977 Aquilegia oxysepala HOM05D005561 ORTHO05D006834 1.4e-86 323.9 573 34.6
SalBow6G7068 Salvia bowleyana HOM05D005561 ORTHO05D006834 1.4e-86 323.9 584 35.6
AL8G19230 Arabidopsis lyrata HOM05D005561 ORTHO05D006834 7.8e-85 318.2 569 35.1
CARHR284980 Cardamine hirsuta HOM05D005561 ORTHO05D006834 5.1e-84 315.5 569 35.3
BcaC04g22001 Brassica carinata HOM05D005561 ORTHO05D006834 6.6e-84 315.1 552 36.8
BolC9t55390H Brassica oleracea HOM05D005561 ORTHO05D006834 8.6e-84 314.7 553 36.7
C09p24980 Brassica napus HOM05D005561 ORTHO05D006834 3.3e-83 312.8 553 36.5
Carub.0008s0680 Capsella rubella HOM05D005561 ORTHO05D006834 4.3e-83 312.4 563 35.2
PSO170G1066 Papaver somniferum HOM05D005561 ORTHO05D006834 2.8e-82 309.7 578 33.7
unitig_22.g5815 Utricularia gibba HOM05D005561 ORTHO05D006834 3.6e-82 309.3 579 34.0
AT5G42350 Arabidopsis thaliana HOM05D005561 ORTHO05D006834 4.7e-82 308.9 570 35.1
Lsat_1_v5_gn_2_1901 Lactuca sativa HOM05D005561 ORTHO05D006834 1.4e-81 307.4 493 37.3
BcaNung05251 Brassica carinata HOM05D005561 ORTHO05D006834 2.3e-81 306.6 541 37.9
AT5G42360 Arabidopsis thaliana HOM05D005561 ORTHO05D006834 2.0e-80 303.5 570 34.4
BcaB07g31083 Brassica carinata HOM05D005561 ORTHO05D006834 2.6e-80 303.1 555 37.1
AL8G19220 Arabidopsis lyrata HOM05D005561 ORTHO05D006834 6.4e-79 298.5 570 34.6
PSO210G6209 Papaver somniferum HOM05D005561 ORTHO05D006834 1.1e-78 297.7 569 33.0
ECA238G1647 Erigeron canadensis HOM05D005561 ORTHO05D006834 4.1e-78 295.8 519 35.1
A09p19610 Brassica napus HOM05D005561 ORTHO05D006834 5.4e-78 295.4 555 35.0
BraA09t37572Z Brassica rapa HOM05D005561 ORTHO05D006834 7.1e-78 295.0 556 34.9
Actinidia17061 Actinidia chinensis HOM05D005561 ORTHO05D006834 1.3e-76 290.8 509 38.1
Sp7g08210 Schrenkiella parvula HOM05D005561 ORTHO05D006834 1.7e-76 290.4 569 33.2
HanXRQChr06g0185211 Helianthus annuus HOM05D005561 ORTHO05D006834 1.5e-75 287.3 552 35.1
Oeu026110.1 Olea europaea HOM05D005561 ORTHO05D006834 3.3e-75 286.2 428 41.1
CDE05G2424 Ceratophyllum demersum HOM05D005561 ORTHO05D006834 1.2e-74 284.3 401 41.6
SGA_v2.0_scaffold54G19641 Striga asiatica HOM05D005561 ORTHO05D006834 1.4e-70 270.8 568 33.6
Ciclev10009595m.g Citrus clementina HOM05D005561 ORTHO05D006834 3.2e-70 269.6 155 77.4
AUR62042579 Chenopodium quinoa HOM05D005561 ORTHO05D006834 2.1e-69 266.9 449 41.0
Atru.chr13.103 Acer truncatum HOM05D005561 ORTHO05D006834 7.8e-69 265.0 155 75.5
MBI05_g33302_MAGBIO Magnolia biondii HOM05D005561 ORTHO05D006834 5.8e-64 248.8 629 29.7
ATR0807G210 Amborella trichopoda HOM05D005561 ORTHO05D006834 6.0e-53 212.2 611 28.6
SEGI_19604 Sequoiadendron giganteum HOM05D005561 ORTHO05D006834 3.7e-50 203.0 155 59.4
SEGI_32322 Sequoiadendron giganteum HOM05D005561 ORTHO05D006834 3.7e-50 203.0 155 59.4
Zm00001eb320670 Zea mays HOM05D005561 ORTHO05D006834 2.5e-43 180.3 155 54.8
TAR376G0177 Trochodendron aralioides HOM05D005561 ORTHO05D006834 2.0e-40 170.6 113 69.9
CARHR284990 Cardamine hirsuta HOM05D005561 ORTHO05D006834 2.6e-40 170.2 152 50.0
Os09g0555300 Oryza sativa ssp. japonica HOM05D005561 ORTHO05D006834 2.6e-40 170.2 158 51.9
Mapoly0107s0031 Marchantia polymorpha HOM05D005561 ORTHO05D006834 1.1e-38 164.9 159 50.9
TAR376G1058 Trochodendron aralioides HOM05D005561 ORTHO05D006834 1.6e-34 151.0 121 59.5
VMungo1080G0280 Vigna mungo HOM05D005561 ORTHO05D006834 2.7e-21 107.1 67 70.1
TPR.G26790 Trifolium pratense HOM05D005561 ORTHO05D006834 1.0e-20 105.1 94 50.0
Prupe.1G085800 Prunus persica HOM05D005561 ORTHO05D006834 1.1e-19 101.7 97 54.6
Medtr3g032780 Medicago truncatula HOM05D005561 ORTHO05D006834 7.7e-16 89.0 293 26.3
Atru.chr13.102 Acer truncatum HOM05D005561 ORTHO05D006834 1.7e-07 61.2 73 45.2
Sc15g0004190 Simmondsia chinensis HOM05D005561 ORTHO05D006834 6.5e-07 59.3 156 31.4
Medtr1g096890 Medicago truncatula HOM05D005561 ORTHO05D006834 1.1e-06 58.5 85 40.0
SMO270G0041 Selaginella moellendorffii HOM05D005561 ORTHO05D006834 1.9e-06 57.8 44 56.8
HPP92_002579 Vanilla planifolia HOM05D001579 ORTHO05D003470 4.2e-06 56.6 105 38.1
TPR.G28384 Trifolium pratense HOM05D005561 ORTHO05D006834 5.5e-06 56.2 80 42.5
Mapoly1710s0002 Marchantia polymorpha HOM05D005561 ORTHO05D006834 7.2e-06 55.8 93 34.4


User provided reference genes

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