Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.4e-162 576.2 292 100.0
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 4.3e-156 554.7 292 96.6
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 6.7e-141 504.2 292 88.4
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 3.3e-140 501.9 292 88.4
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 4.6e-134 481.5 292 86.0
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 6.3e-115 417.9 290 73.4
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 9.1e-114 414.1 289 73.7
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.9e-112 409.1 297 72.1
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 1.9e-111 406.4 299 69.9
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 9.4e-111 404.1 293 71.0
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.2e-110 403.7 297 71.7
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 2.1e-110 402.9 297 70.4
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 3.0e-109 399.1 298 70.8
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 8.8e-109 397.5 269 71.7
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.1e-108 397.1 289 70.9
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 2.6e-108 396.0 302 70.2
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 1.3e-107 393.7 233 84.5
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 8.2e-107 391.0 268 72.8
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 5.3e-106 388.3 293 68.9
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 1.2e-105 387.1 272 72.1
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.2e-105 387.1 270 71.1
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 3.5e-105 385.6 238 78.6
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 2.9e-104 382.5 244 76.6
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 2.9e-104 382.5 244 76.6
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 6.5e-104 381.3 258 73.3
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 8.5e-104 380.9 287 69.0
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 8.5e-104 380.9 292 66.4
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.1e-103 380.6 282 68.1
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.5e-103 380.2 289 67.5
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.9e-103 379.8 248 75.4
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 4.2e-103 378.6 299 68.2
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 4.2e-103 378.6 252 73.8
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 5.5e-103 378.3 301 68.8
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 7.2e-103 377.9 296 66.9
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 7.2e-103 377.9 296 66.9
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 9.4e-103 377.5 242 76.9
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 9.4e-103 377.5 242 76.9
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 9.4e-103 377.5 242 76.9
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 9.4e-103 377.5 289 67.8
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 1.6e-102 376.7 290 65.9
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.6e-102 376.7 290 65.9
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 3.6e-102 375.6 286 67.8
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 4.7e-102 375.2 247 75.7
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 4.7e-102 375.2 293 66.9
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 6.1e-102 374.8 295 67.1
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 6.1e-102 374.8 290 66.9
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.4e-101 373.6 294 67.0
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 1.8e-101 373.2 259 73.0
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 2.3e-101 372.9 292 66.8
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 4.4e-100 368.6 294 66.3
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 7.5e-100 367.9 301 66.4
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.3e-99 367.1 300 64.7
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.7e-99 366.7 276 67.4
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 2.2e-99 366.3 251 74.1
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 2.8e-99 365.9 249 73.9
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 2.8e-99 365.9 245 75.9
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 4.8e-99 365.2 246 74.4
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.1e-98 364.0 253 70.4
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.4e-98 363.6 299 63.2
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 1.8e-98 363.2 301 65.1
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.8e-98 363.2 233 77.3
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 2.4e-98 362.8 285 68.1
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 3.1e-98 362.5 297 64.3
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 3.1e-98 362.5 306 61.4
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 3.1e-98 362.5 295 64.7
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 4.1e-98 362.1 297 65.0
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 4.1e-98 362.1 286 64.3
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.2e-97 360.5 229 78.2
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 2.9e-96 355.9 248 71.8
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 4.7e-94 348.6 316 59.2
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 5.2e-93 345.1 278 62.9
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 6.8e-93 344.7 301 60.1
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 1.2e-92 344.0 273 64.8
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 5.7e-92 341.7 242 68.6
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 9.8e-92 340.9 305 59.0
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 3.7e-91 339.0 278 62.2
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 4.8e-91 338.6 308 59.7
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 8.3e-91 337.8 308 59.4
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 4.1e-90 335.5 275 61.5
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 4.1e-90 335.5 302 59.3
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 3.5e-89 332.4 264 63.3
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 7.7e-89 331.3 239 67.4
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.2e-87 325.9 263 65.0
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 2.7e-86 322.8 292 61.0
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 6.1e-86 321.6 240 65.8
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.0e-85 320.9 207 72.0
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 8.3e-83 311.2 270 60.7
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 4.1e-82 308.9 241 64.7
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 9.2e-82 307.8 354 52.0
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.2e-81 307.4 288 60.1
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 4.5e-81 305.4 249 64.7
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.7e-80 303.5 210 73.8
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 7.3e-79 298.1 238 65.1
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.1e-78 295.0 262 60.7
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.8e-77 293.5 262 60.7
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 6.8e-77 291.6 188 73.4
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 3.4e-76 289.3 158 89.2
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 8.6e-72 274.6 241 63.1
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.1e-70 270.0 189 70.4
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.2e-68 264.2 304 50.0
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 7.5e-68 261.5 237 56.5
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 3.0e-64 249.6 257 52.9
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.5e-63 244.6 295 49.5
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 9.2e-58 228.0 176 65.9
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 1.2e-44 184.5 146 63.7
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.7e-40 170.6 97 79.4
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 1.4e-34 151.0 265 36.2
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 4.2e-34 149.4 104 70.2
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.2e-25 121.3 196 36.2
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 7.6e-12 75.5 56 67.9
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 2.5e-10 70.5 101 40.6


User provided reference genes

Program Settings