Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.8e-96 354.0 177 100.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-63 246.1 224 63.4
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-46 189.5 220 54.1
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.3e-45 184.1 171 60.2
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-42 177.2 211 50.2
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-42 177.2 208 49.5
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.3e-42 175.6 208 53.4
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.1e-41 171.0 152 67.8
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.9e-40 167.9 106 83.0
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.8e-39 164.9 105 83.8
Nitab4.5_0009966g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.4e-37 158.3 194 51.5
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.7e-35 151.0 251 40.2
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.6e-34 148.3 122 70.5
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.6e-34 148.3 162 54.3
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.1e-33 144.4 201 46.3
Nitab4.5_0002227g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.9e-32 141.4 156 57.7
Nitab4.5_0008563g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.9e-32 141.4 120 65.8
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.8e-31 138.3 134 56.7
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 7.6e-31 137.9 202 45.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.7e-30 136.7 224 37.9
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 2.3e-27 126.3 184 40.8
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 9.6e-26 120.9 184 40.8
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 2.8e-25 119.4 191 40.8
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.4e-24 117.1 211 37.0
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.4e-24 116.3 166 40.4
Nitab4.5_0007579g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.9e-24 114.8 99 67.7
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 5.8e-23 111.7 172 40.1
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 7.6e-23 111.3 179 38.5
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 6.5e-22 108.2 180 35.0
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 6.5e-22 108.2 180 35.0
Solyc07g039615.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.1e-21 107.5 99 62.6
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 1.4e-21 107.1 175 36.6
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 1.4e-21 107.1 180 38.3
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-21 106.7 184 37.5
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 2.5e-21 106.3 104 52.9
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 4.2e-21 105.5 182 37.4
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 2.1e-20 103.2 179 35.8
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.6e-20 102.1 102 51.0
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 1.0e-19 100.9 165 38.8
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 3.9e-19 99.0 178 33.1
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 5.1e-19 98.6 149 39.6
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.6e-18 94.4 220 31.4
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-17 93.6 98 57.1
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 1.8e-16 90.1 104 43.3
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 2.4e-16 89.7 180 31.1
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 2.4e-16 89.7 177 37.3
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 5.3e-16 88.6 178 30.9
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.6e-15 86.3 102 45.1
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 5.8e-15 85.1 180 34.4
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.8e-15 85.1 92 48.9
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 7.6e-15 84.7 176 35.2
Nitab4.5_0004672g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-14 83.6 117 43.6
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.2e-14 83.2 99 47.5
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-13 80.1 179 29.6
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-13 80.1 179 29.6
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 5.5e-13 78.6 179 29.1
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 9.3e-13 77.8 88 46.6
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.2e-12 77.4 175 30.3
Phvul.010G077600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.1e-12 76.6 75 50.7
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-11 73.9 191 31.4
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 2.3e-11 73.2 187 32.1
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 3.0e-11 72.8 174 31.0
Nitab4.5_0001158g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.9e-11 72.4 37 83.8
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 8.7e-11 71.2 167 29.9
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 1.1e-10 70.9 144 29.9
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 1.5e-10 70.5 164 29.9
Nitab4.5_0000154g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-10 69.7 121 38.0
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 3.3e-10 69.3 127 33.9
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-10 68.9 211 28.9
Nitab4.5_0007527g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-10 68.9 132 34.8
Peaxi162Scf00005g00443 Petunia axillaris HOM05D002954 ORTHO05D003353 4.3e-10 68.9 92 43.5
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 5.7e-10 68.6 139 32.4
arahy.Tifrunner.gnm1.ann1.LZRM5J Arachis hypogaea HOM05D011000 ORTHO05D000385 7.4e-10 68.2 154 28.6
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 7.4e-10 68.2 173 30.6
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 1.3e-09 67.4 187 29.4
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 2.2e-09 66.6 174 31.0
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 2.2e-09 66.6 180 30.0
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-09 66.2 61 63.9
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-09 66.2 201 29.9
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 2.8e-09 66.2 110 34.5
arahy.Tifrunner.gnm1.ann1.KMI722 Arachis hypogaea HOM05D009662 ORTHO05D003353 6.3e-09 65.1 73 37.0
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 1.4e-08 63.9 94 39.4
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 4.1e-08 62.4 101 32.7
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 5.3e-08 62.0 128 28.9
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 9.0e-08 61.2 172 28.5
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 9.0e-08 61.2 161 27.3
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.2e-07 60.8 97 35.1
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-07 60.5 179 29.1
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.5e-07 60.5 172 28.5
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.5e-07 60.5 172 28.5
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-07 60.1 161 29.8
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 2.0e-07 60.1 146 29.5
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 2.6e-07 59.7 187 26.7
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-07 59.3 167 29.9
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 3.4e-07 59.3 75 45.3
TPR.G22956 Trifolium pratense HOM05D013784 ORTHO05D003353 3.4e-07 59.3 63 41.3
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.9e-07 58.5 112 33.9
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 5.9e-07 58.5 131 28.2
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.7e-07 58.2 173 27.2
Lj6g0018783 Lotus japonicus HOM05D002954 ORTHO05D000385 1.3e-06 57.4 113 32.7
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-06 57.4 153 24.8
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-06 57.0 172 27.9
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-06 56.6 172 30.2
Peaxi162Scf01029g00034 Petunia axillaris HOM05D002954 ORTHO05D003213 2.2e-06 56.6 137 26.3
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 3.8e-06 55.8 171 30.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 5.0e-06 55.5 174 28.2
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-06 55.5 148 29.1
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 6.5e-06 55.1 68 38.2
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.5e-06 55.1 164 29.3
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.5e-06 55.1 165 28.5
Peaxi162Scf00039g00318 Petunia axillaris HOM05D002954 ORTHO05D003353 8.5e-06 54.7 97 40.2


User provided reference genes

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