Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009451g0060 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.6e-183 646.0 333 100.0
Nitab4.5_0000500g0310 Nicotiana tabacum HOM05D003893 ORTHO05D005167 6.6e-169 597.4 333 94.3
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 1.5e-168 596.3 340 91.8
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 2.2e-164 582.4 340 89.7
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 3.2e-163 578.6 340 89.4
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 6.0e-162 574.3 339 87.9
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 1.3e-127 460.3 336 70.5
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 2.8e-127 459.1 337 70.3
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 4.8e-127 458.4 334 71.9
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 1.5e-125 453.4 334 68.3
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 2.0e-125 453.0 334 71.0
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 4.5e-125 451.8 337 70.3
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 4.9e-124 448.4 337 69.1
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 8.4e-124 447.6 335 68.4
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 1.9e-123 446.4 335 67.8
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 2.5e-123 446.0 335 68.7
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 9.3e-123 444.1 331 69.8
ClCG10G002230 Citrullus lanatus HOM05D003893 ORTHO05D005167 1.6e-122 443.4 338 67.8
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 3.5e-122 442.2 337 68.8
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 4.6e-122 441.8 335 68.4
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 1.8e-121 439.9 336 67.9
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 5.1e-121 438.3 337 69.4
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 6.7e-121 438.0 334 67.4
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 8.7e-121 437.6 333 68.2
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 1.9e-120 436.4 335 66.3
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 2.5e-120 436.0 335 67.8
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 3.3e-120 435.6 334 67.1
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 4.3e-120 435.3 335 66.9
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 4.3e-120 435.3 337 68.8
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 7.4e-120 434.5 334 64.7
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 1.3e-119 433.7 334 67.1
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 1.3e-119 433.7 334 66.2
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 2.2e-119 433.0 332 68.1
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 3.7e-119 432.2 332 68.1
SalBow1G1311 Salvia bowleyana HOM05D003893 ORTHO05D005167 3.7e-119 432.2 337 69.1
SalBow1G5499 Salvia bowleyana HOM05D003893 ORTHO05D005167 3.7e-119 432.2 337 69.1
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 4.8e-119 431.8 334 68.3
QL01p036487 Quercus lobata HOM05D003893 ORTHO05D005167 4.8e-119 431.8 353 65.7
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 4.8e-119 431.8 334 65.9
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 1.1e-118 430.6 334 65.9
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 1.4e-118 430.3 335 66.6
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 1.4e-118 430.3 335 65.7
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.8e-118 429.9 338 65.4
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 1.8e-118 429.9 332 68.1
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 2.4e-118 429.5 337 67.7
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 2.4e-118 429.5 333 67.3
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 3.1e-118 429.1 332 65.4
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 3.1e-118 429.1 335 66.0
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 3.1e-118 429.1 334 68.0
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 4.1e-118 428.7 334 68.0
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 4.1e-118 428.7 337 68.0
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 6.9e-118 427.9 332 66.3
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 6.9e-118 427.9 337 67.7
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 9.0e-118 427.6 334 68.3
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 2.6e-117 426.0 333 65.5
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 3.4e-117 425.6 333 65.5
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 3.4e-117 425.6 333 65.5
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 3.4e-117 425.6 335 66.0
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 4.5e-117 425.2 337 65.6
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 5.9e-117 424.9 335 65.1
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 1.0e-116 424.1 335 65.1
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 1.7e-116 423.3 335 64.8
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 2.2e-116 422.9 335 64.5
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 2.9e-116 422.5 333 65.5
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 6.5e-116 421.4 334 62.6
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 9.4e-115 417.5 335 64.5
TPR.G17142 Trifolium pratense HOM05D003893 ORTHO05D005167 9.4e-115 417.5 335 63.6
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 1.6e-114 416.8 332 63.9
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 1.0e-113 414.1 335 63.6
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 1.4e-113 413.7 335 63.0
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 3.0e-113 412.5 335 63.0
Haze_08369 Corylus avellana HOM05D003893 ORTHO05D005167 8.8e-113 411.0 310 68.4
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 5.7e-112 408.3 335 63.9
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 7.4e-112 407.9 336 63.1
Psat4g075840 Pisum sativum HOM05D003893 ORTHO05D005167 2.2e-111 406.4 333 63.1
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 2.0e-109 399.8 336 62.2
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 7.9e-106 387.9 311 65.3
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 1.1e-102 377.5 337 58.2
vmacro17756 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 3.1e-102 375.9 361 59.0
Hma1.2p1_0840F.1_g226640 Hydrangea macrophylla HOM05D003893 ORTHO05D005167 9.1e-102 374.4 335 60.3
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 2.7e-98 362.8 338 55.9
Ca_30503_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.3e-92 344.0 283 63.6
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.5e-91 340.5 335 55.8
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 8.0e-90 334.7 317 59.9
Hund14480 Selenicereus undatus HOM05D003893 ORTHO05D005167 2.2e-87 326.6 307 58.0
BcaNung07386 Brassica carinata HOM05D003893 ORTHO05D005167 8.3e-87 324.7 332 54.8
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 4.2e-75 285.8 361 44.3
CDE12G0573 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 2.3e-73 280.0 178 77.0
Cpa.g.sc2698.1 Carica papaya HOM05D003893 ORTHO05D005167 3.0e-73 279.6 179 78.2
CBR_g21115 Chara braunii HOM05D003893 ORTHO05D005167 1.5e-72 277.3 388 42.5
Os03g0100500 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 6.3e-71 271.9 218 62.8
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 1.9e-67 260.4 231 60.2
SMO364G0317 Selaginella moellendorffii HOM05D003893 ORTHO05D005167 8.6e-60 235.0 178 63.5
VMungo0251G0173 Vigna mungo HOM05D003893 ORTHO05D005167 1.5e-59 234.2 229 56.8
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 4.6e-53 212.6 178 61.8
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 1.2e-50 204.5 270 47.0
VMungo0251G2254 Vigna mungo HOM05D003893 ORTHO05D005167 8.3e-47 191.8 106 86.8
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.9e-46 190.7 129 74.4
Rhsim11G0002000 Rhododendron simsii HOM05D003893 ORTHO05D005167 3.2e-46 189.9 112 85.7
Cre01.g027350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 7.1e-46 188.7 153 58.8
COL.COLO4_04209 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.2e-42 177.9 188 55.9
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 2.9e-39 166.8 148 51.4
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 2.3e-36 157.1 140 59.3
Cre15.g637350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 7.6e-32 142.1 151 43.7
PRCOL_00006953 Prasinoderma coloniale HOM05D003893 ORTHO05D005167 1.0e-28 131.7 152 42.1
Ah.07g199170 Amaranthus hybridus HOM05D003893 ORTHO05D005167 3.5e-21 106.7 53 98.1
COL.COLO4_00031 Corchorus olitorius HOM05D003893 ORTHO05D005167 8.1e-18 95.5 128 48.4
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 1.6e-13 81.3 56 67.9
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 1.6e-10 71.2 160 31.2
CSS0024237 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 1.1e-09 68.6 128 36.7


User provided reference genes

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