Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009440g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 4.6e-76 287.7 138 100.0
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 2.1e-68 262.3 137 91.2
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 3.0e-67 258.5 130 95.4
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 3.0e-67 258.5 130 95.4
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 5.3e-64 247.7 137 84.7
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 7.7e-63 243.8 137 82.5
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 1.7e-62 242.7 137 82.5
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 1.7e-62 242.7 129 87.6
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 2.2e-62 242.3 130 87.7
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 6.5e-62 240.7 135 83.0
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 6.5e-62 240.7 135 83.0
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 1.1e-61 240.0 135 82.2
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 1.9e-61 239.2 130 86.2
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 2.5e-61 238.8 130 86.2
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 2.5e-61 238.8 135 83.0
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 3.2e-61 238.4 135 80.7
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 4.2e-61 238.0 135 83.0
QL02p036407 Quercus lobata HOM05D004811 ORTHO05D006888 4.2e-61 238.0 135 80.7
QL02p036870 Quercus lobata HOM05D004811 ORTHO05D006888 4.2e-61 238.0 135 80.7
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 5.5e-61 237.7 137 80.3
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 1.2e-60 236.5 135 80.0
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 1.2e-60 236.5 128 85.9
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 1.2e-60 236.5 137 81.0
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 1.2e-60 236.5 135 83.0
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 1.6e-60 236.1 135 82.2
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 2.1e-60 235.7 130 85.4
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 2.1e-60 235.7 137 80.3
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 3.6e-60 235.0 130 83.1
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 6.1e-60 234.2 128 85.2
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 6.1e-60 234.2 145 77.9
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 7.9e-60 233.8 137 78.1
MD09G1000100 Malus domestica HOM05D004811 ORTHO05D006888 7.9e-60 233.8 135 81.5
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 1.4e-59 233.0 135 80.0
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 1.4e-59 233.0 130 82.3
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 1.4e-59 233.0 127 86.6
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 1.8e-59 232.6 135 82.2
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 1.8e-59 232.6 137 76.6
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 2.3e-59 232.3 135 79.3
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 6.7e-59 230.7 130 80.8
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 6.7e-59 230.7 127 85.0
Hund15153 Selenicereus undatus HOM05D004811 ORTHO05D006888 6.7e-59 230.7 127 84.3
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 1.1e-58 229.9 133 79.7
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 1.1e-58 229.9 135 79.3
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 1.5e-58 229.6 137 78.1
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 2.0e-58 229.2 125 84.0
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 2.0e-58 229.2 135 79.3
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 4.4e-58 228.0 134 78.4
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 4.4e-58 228.0 135 77.8
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 4.4e-58 228.0 137 78.1
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 5.7e-58 227.6 130 82.3
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 9.7e-58 226.9 130 80.8
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 1.3e-57 226.5 137 75.9
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 1.7e-57 226.1 134 76.9
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 2.8e-57 225.3 127 84.3
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.8e-57 225.3 127 84.3
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.8e-57 225.3 127 84.3
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 2.8e-57 225.3 128 80.5
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 4.8e-57 224.6 134 76.9
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 6.3e-57 224.2 130 80.0
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 8.2e-57 223.8 134 76.1
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 1.4e-56 223.0 134 75.4
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.4e-56 222.2 127 82.7
CAN.G606.11 Capsicum annuum HOM05D004811 ORTHO05D006888 3.1e-56 221.9 110 95.5
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 4.1e-56 221.5 130 76.2
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 4.1e-56 221.5 128 78.9
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 1.2e-55 219.9 108 98.1
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 1.5e-55 219.5 136 73.5
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 1.5e-55 219.5 130 75.4
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 2.6e-55 218.8 130 76.2
SGA_v2.0_scaffold55G19835 Striga asiatica HOM05D004811 ORTHO05D006888 2.6e-55 218.8 148 69.6
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 4.5e-55 218.0 130 75.4
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 4.5e-55 218.0 147 74.1
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 4.5e-55 218.0 126 80.2
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 5.9e-55 217.6 137 72.3
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 5.9e-55 217.6 135 74.1
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 1.0e-54 216.9 128 78.1
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 1.0e-54 216.9 137 73.7
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 1.0e-54 216.9 130 77.7
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 1.7e-54 216.1 130 75.4
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 2.2e-54 215.7 137 70.8
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 3.8e-54 214.9 136 71.3
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 1.5e-53 213.0 137 70.1
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 1.5e-53 213.0 137 70.1
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 1.5e-53 213.0 137 70.1
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 1.5e-53 213.0 137 70.1
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 1.5e-53 213.0 137 70.1
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 3.2e-53 211.8 137 72.3
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 3.2e-53 211.8 129 75.2
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 5.5e-53 211.1 130 73.1
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 9.4e-53 210.3 130 73.8
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 3.6e-52 208.4 109 89.9
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 1.0e-51 206.8 130 74.6
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 1.4e-51 206.5 135 72.6
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 2.6e-50 202.2 128 69.5
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 4.4e-50 201.4 137 68.6
TPR.G33000 Trifolium pratense HOM05D004811 ORTHO05D006888 8.2e-49 197.2 109 83.5
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 6.5e-46 187.6 130 63.8
HPP92_028180 Vanilla planifolia HOM05D004811 ORTHO05D006888 1.1e-45 186.8 132 68.9
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 5.5e-45 184.5 111 75.7
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 2.1e-44 182.6 137 65.0
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 2.3e-43 179.1 135 63.7
RcHm_v2.0_Chr2g0146051 Rosa chinensis HOM05D004811 ORTHO05D006888 2.3e-43 179.1 127 63.8
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 8.8e-43 177.2 126 61.1
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 1.8e-40 169.5 128 57.8
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 4.5e-39 164.9 127 59.8
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 4.5e-39 164.9 127 59.8
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.9e-39 164.5 127 59.8
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.0e-38 161.4 127 59.1
CBR_g19801 Chara braunii HOM05D004811 ORTHO05D006888 8.0e-36 154.1 129 55.0
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis HOM05D004811 ORTHO05D006888 1.2e-26 123.6 87 62.1
MCO07G203 Micromonas commoda HOM05D004811 ORTHO05D006888 8.6e-22 107.5 129 34.9
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 1.4e-19 100.1 61 70.5
SalBow3G0991 Salvia bowleyana HOM05D004811 ORTHO05D006888 1.4e-19 100.1 62 75.8
Cre12.g506050 Chlamydomonas reinhardtii HOM05D004811 ORTHO05D006888 1.8e-19 99.8 126 39.7
PRCOL_00007255 Prasinoderma coloniale HOM05D004811 ORTHO05D006888 2.7e-15 85.9 126 34.1
ClCG04G004810 Citrullus lanatus HOM05D004811 ORTHO05D044609 4.6e-07 58.5 90 40.0
Eucgr.K01429 Eucalyptus grandis HOM05D002279 ORTHO05D002644 3.0e-06 55.8 100 31.0
Sed0000937 Sechium edule HOM05D004811 ORTHO05D044609 3.0e-06 55.8 39 66.7


User provided reference genes

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