Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 3.5e-68 261.5 134 100.0
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 9.4e-66 253.4 134 97.0
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 2.0e-60 235.7 134 88.1
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 1.3e-59 233.0 134 90.3
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 2.5e-58 228.8 134 87.3
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 5.5e-58 227.6 134 87.3
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.2e-49 199.9 132 76.5
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 8.8e-48 193.7 134 74.6
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 1.2e-47 193.4 134 74.6
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 3.4e-47 191.8 123 77.2
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.3e-46 189.9 131 73.3
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 2.2e-46 189.1 104 92.3
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 1.8e-45 186.0 121 76.9
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 7.0e-45 184.1 121 74.4
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 7.0e-45 184.1 121 73.6
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 1.2e-44 183.3 121 74.4
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.6e-44 183.0 148 65.5
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.0e-44 182.6 133 69.2
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 2.7e-44 182.2 127 71.7
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 4.5e-44 181.4 121 73.6
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 1.3e-43 179.9 121 74.4
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.7e-43 179.5 122 73.0
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.1e-42 176.8 134 67.9
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.9e-42 176.0 124 71.0
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 2.5e-42 175.6 123 68.3
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 3.3e-42 175.3 134 67.2
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 3.3e-42 175.3 121 70.2
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 5.6e-42 174.5 121 70.2
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 7.2e-42 174.1 136 65.4
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 1.2e-41 173.3 123 69.9
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 1.6e-41 172.9 126 68.3
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.6e-41 172.9 134 65.7
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 3.6e-41 171.8 120 71.7
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 4.7e-41 171.4 126 69.8
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 4.7e-41 171.4 123 70.7
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 6.1e-41 171.0 123 70.7
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.0e-40 170.2 112 78.6
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.0e-40 170.2 123 70.7
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 1.0e-40 170.2 121 69.4
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.8e-40 169.5 126 69.0
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.8e-40 169.5 123 69.9
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 2.3e-40 169.1 123 69.1
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 2.3e-40 169.1 120 69.2
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 3.0e-40 168.7 131 64.9
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 3.0e-40 168.7 131 64.9
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 3.0e-40 168.7 122 66.4
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 3.0e-40 168.7 123 68.3
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 4.0e-40 168.3 133 63.9
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 4.0e-40 168.3 132 64.4
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 5.2e-40 167.9 123 68.3
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 5.2e-40 167.9 121 66.9
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 6.8e-40 167.5 126 68.3
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 6.8e-40 167.5 132 63.6
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 8.9e-40 167.2 133 62.4
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 2.0e-39 166.0 123 66.7
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 2.6e-39 165.6 126 66.7
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 3.4e-39 165.2 132 62.9
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 5.7e-39 164.5 132 63.6
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 1.7e-38 162.9 132 59.1
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 2.9e-38 162.2 125 65.6
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 3.7e-38 161.8 132 58.3
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 3.7e-38 161.8 133 57.9
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 6.4e-38 161.0 123 63.4
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 6.4e-38 161.0 132 58.3
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 6.4e-38 161.0 120 65.0
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 6.4e-38 161.0 124 65.3
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 8.3e-38 160.6 131 60.3
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 8.3e-38 160.6 133 57.1
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 8.3e-38 160.6 132 57.6
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 8.3e-38 160.6 132 57.6
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 8.3e-38 160.6 132 57.6
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.1e-37 160.2 121 61.2
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 1.4e-37 159.8 132 57.6
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.8e-37 159.5 132 59.1
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.8e-37 159.5 120 67.5
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.2e-37 158.7 123 65.9
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 7.0e-37 157.5 132 61.4
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 9.2e-37 157.1 126 60.3
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 1.6e-36 156.4 132 56.8
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 1.6e-36 156.4 132 56.1
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 2.7e-36 155.6 126 62.7
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 3.5e-36 155.2 102 74.5
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 3.5e-36 155.2 120 60.8
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.0e-35 153.7 123 64.2
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.3e-35 153.3 120 64.2
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 1.7e-35 152.9 161 54.7
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.9e-34 149.4 105 69.5
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.5e-34 149.1 122 59.8
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 7.3e-34 147.5 166 50.6
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 9.5e-34 147.1 105 68.6
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 5.2e-32 141.4 120 60.0
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 7.5e-31 137.5 104 70.2
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 8.3e-30 134.0 121 60.3
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 3.2e-29 132.1 171 45.0
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.7e-27 126.3 93 69.9
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.3e-27 125.9 103 64.1
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.1e-26 123.6 117 53.8
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 1.9e-26 122.9 123 50.4
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 3.3e-26 122.1 102 60.8
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.6e-25 119.8 111 54.1
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 2.8e-25 119.0 92 67.4
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 6.2e-25 117.9 106 59.4
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 8.1e-25 117.5 103 64.1
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 1.4e-24 116.7 94 59.6
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.4e-24 116.7 93 65.6
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 3.1e-24 115.5 118 47.5
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 5.2e-24 114.8 92 66.3
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 4.4e-23 111.7 92 60.9
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.1e-21 107.1 92 57.6
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.2e-21 105.5 92 56.5
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 4.6e-20 101.7 103 52.4
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.2e-17 93.6 88 54.5
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 4.7e-17 91.7 96 42.7
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 4.7e-17 91.7 99 47.5
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 6.2e-17 91.3 69 65.2
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 2.2e-14 82.8 90 53.3
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 2.2e-14 82.8 74 56.8
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 1.1e-13 80.5 80 58.8
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.9e-13 79.7 92 46.7
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 6.2e-09 64.7 110 30.0
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 8.9e-08 60.8 51 58.8


User provided reference genes

Program Settings