Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.9e-78 294.7 141 100.0
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 9.5e-77 290.0 141 99.3
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 8.9e-75 283.5 141 95.7
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 3.9e-70 268.1 141 90.1
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 2.1e-63 245.7 139 84.2
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.9e-61 239.2 121 95.0
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 1.9e-61 239.2 121 95.0
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 5.6e-61 237.7 121 93.4
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 7.6e-58 227.3 121 88.4
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.9e-56 222.6 121 86.0
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 1.9e-56 222.6 121 85.1
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 3.2e-56 221.9 121 84.3
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 9.3e-56 220.3 128 82.8
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 2.7e-55 218.8 121 83.5
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 3.5e-55 218.4 121 83.5
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 1.0e-54 216.9 121 82.6
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 1.3e-54 216.5 121 83.5
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 3.0e-54 215.3 121 81.0
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 3.0e-54 215.3 120 84.2
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 3.9e-54 214.9 121 81.8
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 5.1e-54 214.5 121 81.0
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 5.1e-54 214.5 120 81.7
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 6.7e-54 214.2 121 81.0
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 1.5e-53 213.0 121 81.8
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.5e-53 212.2 120 82.5
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 2.5e-53 212.2 124 79.0
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 2.5e-53 212.2 129 75.2
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 4.3e-53 211.5 123 75.6
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 1.3e-52 209.9 120 81.7
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 1.6e-52 209.5 121 81.0
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 2.1e-52 209.1 120 80.0
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 2.8e-52 208.8 121 81.0
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.8e-52 208.8 121 80.2
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 3.6e-52 208.4 123 80.5
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 3.6e-52 208.4 125 80.8
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 3.6e-52 208.4 138 72.5
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 4.8e-52 208.0 122 82.0
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 4.8e-52 208.0 121 79.3
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 4.8e-52 208.0 121 80.2
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 6.2e-52 207.6 119 81.5
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 6.2e-52 207.6 127 76.4
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 8.1e-52 207.2 119 79.8
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 8.1e-52 207.2 120 80.8
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 1.4e-51 206.5 121 79.3
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.8e-51 206.1 138 73.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.4e-51 205.7 121 80.2
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 2.4e-51 205.7 121 80.2
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 3.1e-51 205.3 121 78.5
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.0e-51 204.9 138 72.5
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 5.3e-51 204.5 143 69.2
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 6.9e-51 204.1 119 79.0
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 6.9e-51 204.1 121 77.7
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 6.9e-51 204.1 119 80.7
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 9.0e-51 203.8 120 79.2
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 9.0e-51 203.8 120 79.2
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 9.0e-51 203.8 123 78.9
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 9.0e-51 203.8 138 71.7
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 9.0e-51 203.8 123 74.8
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.5e-50 203.0 120 81.7
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 2.0e-50 202.6 119 77.3
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 2.0e-50 202.6 138 72.5
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 2.0e-50 202.6 122 77.0
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 2.0e-50 202.6 121 76.9
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.6e-50 202.2 121 79.3
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 2.6e-50 202.2 127 74.0
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 2.6e-50 202.2 123 74.8
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 3.4e-50 201.8 121 76.9
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 3.4e-50 201.8 112 84.8
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 4.5e-50 201.4 122 74.6
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 5.8e-50 201.1 121 77.7
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 2.2e-49 199.1 140 67.9
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 2.9e-49 198.7 127 71.7
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 2.9e-49 198.7 140 69.3
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 2.9e-49 198.7 120 77.5
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 3.8e-49 198.4 127 70.9
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 3.8e-49 198.4 127 70.9
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 4.9e-49 198.0 157 63.7
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 6.4e-49 197.6 121 74.4
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 6.4e-49 197.6 128 69.5
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 6.4e-49 197.6 128 69.5
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 6.4e-49 197.6 140 67.9
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 8.4e-49 197.2 127 70.1
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 1.4e-48 196.4 112 81.2
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.4e-48 196.4 120 73.3
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 1.9e-48 196.1 121 74.4
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 4.2e-48 194.9 140 67.1
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 5.5e-48 194.5 117 74.4
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.2e-47 193.4 119 74.8
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 1.2e-47 193.4 121 72.7
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 7.9e-47 190.7 117 71.8
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 7.9e-47 190.7 119 73.9
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 3.7e-44 181.8 122 67.2
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 8.1e-44 180.6 121 65.3
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 2.4e-43 179.1 122 64.8
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 5.3e-43 177.9 111 73.0
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.2e-41 172.6 121 61.2
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 2.5e-40 169.1 121 64.5
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.0e-38 163.7 121 58.7
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 1.8e-38 162.9 109 74.3
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.9e-37 159.5 120 57.5
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 2.6e-34 149.1 122 53.3
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.3e-30 136.7 79 81.0
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 1.3e-30 136.7 122 56.6
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 1.6e-28 129.8 123 50.4
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 3.7e-28 128.6 124 50.0
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.1e-27 127.1 124 48.4
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 1.8e-27 126.3 92 69.6
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.6e-26 122.5 147 44.9
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 2.2e-25 119.4 93 65.6
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.1e-19 100.5 68 66.2
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 5.0e-17 91.7 47 85.1
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 9.4e-16 87.4 46 82.6
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.3e-14 82.8 49 67.3
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 5.2e-14 81.6 49 75.5
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 4.4e-13 78.6 48 68.8
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.7e-09 66.6 43 69.8
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.5e-09 64.3 43 67.4
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 2.1e-07 59.7 35 80.0


User provided reference genes

Program Settings