Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.2e-214 749.6 380 100.0
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 8.9e-178 627.1 443 74.5
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 1.3e-176 623.2 443 74.3
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.1e-172 610.1 443 73.6
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 6.4e-160 567.8 421 73.4
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 2.0e-153 546.2 455 68.1
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 3.0e-125 452.6 400 59.5
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 6.0e-118 428.3 429 54.3
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.3e-116 422.5 432 53.5
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 1.6e-115 420.2 431 53.8
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 5.9e-113 411.8 437 53.1
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 4.2e-111 405.6 516 46.1
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 4.6e-110 402.1 435 51.3
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.8e-109 400.2 497 46.9
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 3.3e-108 396.0 421 51.3
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 4.3e-108 395.6 450 51.6
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.2e-105 387.5 430 49.8
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 3.4e-105 386.0 429 49.7
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 3.8e-104 382.5 438 49.3
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 1.4e-103 380.6 430 50.0
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 2.5e-103 379.8 435 50.8
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 4.2e-103 379.0 440 48.9
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 4.2e-103 379.0 415 50.6
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 1.2e-102 377.5 420 48.1
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 2.1e-102 376.7 417 50.1
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.0e-101 374.4 436 49.5
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 3.0e-101 372.9 435 49.7
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-100 370.2 448 47.5
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 5.7e-100 368.6 434 47.7
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.8e-99 366.3 446 47.5
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 3.7e-99 365.9 439 46.7
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 1.1e-98 364.4 422 49.3
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.5e-97 360.5 409 47.9
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 2.6e-97 359.8 437 48.5
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 3.5e-97 359.4 419 47.0
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 7.7e-97 358.2 416 47.4
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.7e-96 357.1 416 47.1
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 5.0e-96 355.5 446 47.1
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 4.2e-95 352.4 422 49.5
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 2.7e-94 349.7 432 45.8
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 1.0e-93 347.8 428 47.4
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 1.1e-92 344.4 430 46.0
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 1.1e-92 344.4 429 45.2
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 9.7e-92 341.3 445 45.6
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 9.7e-92 341.3 421 46.8
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.3e-91 340.9 430 45.6
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 2.2e-91 340.1 430 45.1
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 2.8e-91 339.7 430 45.6
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 3.7e-91 339.3 431 45.5
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 4.8e-91 339.0 429 45.0
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 8.2e-91 338.2 429 44.5
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.8e-90 337.0 418 45.2
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 5.3e-90 335.5 443 44.5
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 7.7e-89 331.6 447 43.6
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 2.2e-88 330.1 415 46.0
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 6.5e-88 328.6 434 43.5
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 2.5e-87 326.6 441 42.9
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 3.2e-87 326.2 444 43.5
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.2e-86 324.3 430 44.0
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 2.7e-86 323.2 414 44.7
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 8.0e-86 321.6 418 44.7
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.8e-85 320.5 438 43.2
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.8e-85 320.5 433 44.1
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 3.0e-85 319.7 444 42.3
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 4.0e-85 319.3 416 43.8
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 5.2e-85 318.9 445 42.0
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 9.7e-84 314.7 355 47.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.3e-83 314.3 476 41.2
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 4.8e-83 312.4 433 43.2
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 1.4e-82 310.8 443 41.8
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.6e-81 307.4 441 43.1
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 3.8e-80 302.8 377 46.7
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 5.0e-80 302.4 313 51.8
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 6.5e-80 302.0 440 41.4
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 6.5e-80 302.0 425 40.9
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 4.2e-79 299.3 391 44.0
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 5.5e-79 298.9 346 48.3
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 3.6e-78 296.2 415 40.7
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 3.0e-77 293.1 243 61.3
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.2e-76 291.2 416 41.1
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 1.7e-75 287.3 408 43.9
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 8.3e-75 285.0 373 44.0
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 1.4e-74 284.3 230 61.7
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.5e-71 274.2 454 39.6
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 5.5e-71 272.3 313 50.2
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 1.5e-68 264.2 392 44.4
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 2.6e-68 263.5 385 43.9
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.1e-66 258.1 316 48.1
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 2.2e-59 233.8 199 61.3
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 4.7e-54 216.1 152 69.7
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 1.8e-53 214.2 285 41.8
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.9e-50 204.1 463 36.3
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 4.1e-50 203.0 463 36.1
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.4e-50 202.6 451 33.9
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 7.8e-49 198.7 313 41.2
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-46 191.4 460 34.3
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 1.1e-45 188.3 192 50.0
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 6.8e-45 185.7 227 46.7
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 9.9e-44 181.8 284 38.7
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-43 181.4 464 33.6
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-43 180.6 248 44.0
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 8.3e-43 178.7 252 43.3
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.4e-42 177.9 154 57.8
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.9e-42 177.6 204 45.6
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-37 161.0 414 33.6
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.1e-37 160.2 138 63.0
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 1.9e-31 141.0 412 27.9
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 1.9e-31 141.0 412 27.9
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 7.3e-31 139.0 104 65.4
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.6e-30 137.9 132 53.8
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 2.1e-30 137.5 250 33.6
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.8e-29 134.4 118 60.2
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.4e-28 129.8 240 35.4
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.1e-26 125.2 99 64.6
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 1.9e-26 124.4 241 34.9
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 1.9e-26 124.4 108 56.5
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 9.3e-26 122.1 82 70.7
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 3.5e-25 120.2 118 48.3
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 6.0e-25 119.4 325 34.2
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 4.8e-22 109.8 128 46.1
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 9.0e-21 105.5 232 28.4
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.2e-18 97.1 117 45.3
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 5.6e-15 86.3 186 30.6
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 1.6e-14 84.7 106 41.5
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 3.1e-13 80.5 204 27.5
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 1.4e-10 71.6 107 45.8
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 3.2e-10 70.5 87 48.3
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 3.2e-10 70.5 259 28.6
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 1.6e-09 68.2 63 54.0
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.5e-07 60.8 76 47.4


User provided reference genes

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