Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008905g0070 Nicotiana tabacum HOM05D000627 ORTHO05D000365 8.4e-73 276.9 141 100.0
Nitab4.5_0006117g0010 Nicotiana tabacum HOM05D000627 ORTHO05D000365 1.3e-38 163.3 128 71.9
Nitab4.5_0012308g0010 Nicotiana tabacum HOM05D000627 ORTHO05D000365 2.3e-38 162.5 129 71.3
CAN.G1248.10 Capsicum annuum HOM05D000627 ORTHO05D000365 8.7e-30 134.0 151 56.3
PGSC0003DMG400018280 Solanum tuberosum HOM05D000627 ORTHO05D000365 1.1e-29 133.7 151 56.3
Peaxi162Scf00194g00213 Petunia axillaris HOM05D000627 ORTHO05D000365 5.3e-27 124.8 150 54.0
Solyc01g102300.3 Solanum lycopersicum HOM05D000627 ORTHO05D000365 2.6e-26 122.5 150 53.3
Sopen01g044750 Solanum pennellii HOM05D000627 ORTHO05D000365 1.0e-25 120.6 150 53.3
Peaxi162Scf00071g00210 Petunia axillaris HOM05D000627 ORTHO05D000365 3.3e-21 105.5 150 48.0
GSVIVG01031338001 Vitis vinifera HOM05D000627 ORTHO05D000365 2.2e-20 102.8 150 46.0
Nitab4.5_0001975g0030 Nicotiana tabacum HOM05D000627 ORTHO05D000365 2.8e-20 102.4 150 48.0
Thecc.05G330400 Theobroma cacao HOM05D000627 ORTHO05D000365 1.5e-18 96.7 147 45.6
Duzib128G1257 Durio zibethinus HOM05D000627 ORTHO05D000365 3.4e-18 95.5 129 48.8
Nitab4.5_0000081g0230 Nicotiana tabacum HOM05D000627 ORTHO05D000365 7.7e-18 94.4 150 46.0
Dinv24521 Davidia involucrata HOM05D000627 ORTHO05D000365 1.0e-17 94.0 150 44.0
QL03p011172 Quercus lobata HOM05D000627 ORTHO05D000365 1.3e-17 93.6 151 45.0
Duzib106G0443 Durio zibethinus HOM05D000627 ORTHO05D000365 5.0e-17 91.7 151 45.7
Ciclev10027890m.g Citrus clementina HOM05D000627 ORTHO05D000365 6.5e-17 91.3 153 43.1
COL.COLO4_05481 Corchorus olitorius HOM05D000627 ORTHO05D000365 1.1e-16 90.5 149 42.3
Glyma.20G091200 Glycine max HOM05D000627 ORTHO05D000365 1.1e-16 90.5 151 43.7
Lj5g0002964 Lotus japonicus HOM05D000627 ORTHO05D000365 1.1e-16 90.5 150 44.7
Haze_15014 Corylus avellana HOM05D000627 ORTHO05D000365 4.2e-16 88.6 150 44.0
Prupe.6G303500 Prunus persica HOM05D000627 ORTHO05D000365 4.2e-16 88.6 132 47.0
RcHm_v2.0_Chr3g0458701 Rosa chinensis HOM05D000627 ORTHO05D000365 5.5e-16 88.2 137 46.0
Actinidia17735 Actinidia chinensis HOM05D000627 ORTHO05D000365 9.4e-16 87.4 150 43.3
Duzib177G0820 Durio zibethinus HOM05D000627 ORTHO05D000365 1.2e-15 87.0 150 42.0
Manes.09G181800 Manihot esculenta HOM05D000627 ORTHO05D000365 1.6e-15 86.7 133 47.4
TPR.G34901 Trifolium pratense HOM05D000627 ORTHO05D000365 1.6e-15 86.7 155 43.9
Actinidia11692 Actinidia chinensis HOM05D000627 ORTHO05D000365 2.7e-15 85.9 150 44.0
Ca_10208_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 2.7e-15 85.9 150 44.0
Rhsim11G0106200 Rhododendron simsii HOM05D000627 ORTHO05D000365 3.6e-15 85.5 131 46.6
Phvul.007G206000 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 4.7e-15 85.1 151 43.0
Medtr1g084980 Medicago truncatula HOM05D000627 ORTHO05D000365 7.9e-15 84.3 151 44.4
Rhsim05G0124000 Rhododendron simsii HOM05D000627 ORTHO05D000365 7.9e-15 84.3 150 42.7
VMungo0720G1779 Vigna mungo HOM05D000627 ORTHO05D000365 7.9e-15 84.3 146 43.8
Glyma.10G142600 Glycine max HOM05D000627 ORTHO05D000365 1.0e-14 84.0 150 41.3
Glyma.19G224700 Glycine max HOM05D000627 ORTHO05D000365 1.0e-14 84.0 128 48.4
MD04G1185100 Malus domestica HOM05D000627 ORTHO05D000365 1.0e-14 84.0 123 47.2
CiPaw.01G001200 Carya illinoinensis HOM05D000627 ORTHO05D000365 1.8e-14 83.2 150 42.7
FAN02G1668 Fragaria x ananassa HOM05D000627 ORTHO05D000365 2.3e-14 82.8 137 45.3
FAN05G0854 Fragaria x ananassa HOM05D000627 ORTHO05D000365 2.3e-14 82.8 137 45.3
MELO3C031303.2 Cucumis melo HOM05D000627 ORTHO05D000365 3.0e-14 82.4 133 45.9
ClCG02G014630 Citrullus lanatus HOM05D000627 ORTHO05D000365 3.9e-14 82.0 132 44.7
Gohir.A11G275700 Gossypium hirsutum HOM05D000627 ORTHO05D000365 3.9e-14 82.0 151 41.7
Atru.chr12.1522 Acer truncatum HOM05D000627 ORTHO05D000365 5.2e-14 81.6 133 48.1
EL10Ac4g09570 Beta vulgaris HOM05D000627 ORTHO05D000365 5.2e-14 81.6 131 47.3
Manes.08G107100 Manihot esculenta HOM05D000627 ORTHO05D000365 5.2e-14 81.6 134 46.3
vmacro19795 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 5.2e-14 81.6 150 43.3
CsaV3_2G007370 Cucumis sativus L. HOM05D000627 ORTHO05D000365 6.7e-14 81.3 138 44.9
Sabra13G0001100 Salix brachista HOM05D000627 ORTHO05D000365 6.7e-14 81.3 151 46.4
Lsat_1_v5_gn_5_149161 Lactuca sativa HOM05D000627 ORTHO05D000365 8.8e-14 80.9 133 45.1
Lalb_Chr06g0167261 Lupinus albus HOM05D000627 ORTHO05D000365 1.1e-13 80.5 131 45.8
CSS0000158 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 1.5e-13 80.1 152 42.8
FvH4_6g08610 Fragaria vesca HOM05D000627 ORTHO05D000365 1.5e-13 80.1 138 44.9
FAN14G2970 Fragaria x ananassa HOM05D000627 ORTHO05D000365 1.5e-13 80.1 138 44.9
Oeu062798.2 Olea europaea HOM05D000627 ORTHO05D000365 1.5e-13 80.1 140 44.3
Potri.013G001300 Populus trichocarpa HOM05D000627 ORTHO05D000365 1.5e-13 80.1 151 46.4
FAN09G4740 Fragaria x ananassa HOM05D000627 ORTHO05D000365 2.0e-13 79.7 131 45.8
HanXRQChr16g0513391 Helianthus annuus HOM05D000627 ORTHO05D000365 3.3e-13 79.0 142 43.7
arahy.Tifrunner.gnm1.ann1.IC82WL Arachis hypogaea HOM05D000627 ORTHO05D000365 4.4e-13 78.6 150 42.7
Potri.005G001800 Populus trichocarpa HOM05D000627 ORTHO05D000365 4.4e-13 78.6 139 45.3
TAR633G0207 Trochodendron aralioides HOM05D000627 ORTHO05D000365 4.4e-13 78.6 144 42.4
Gohir.D11G286100 Gossypium hirsutum HOM05D000627 ORTHO05D000365 7.4e-13 77.8 154 40.3
Hma1.2p1_0759F.1_g213840 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 7.4e-13 77.8 145 40.0
CSS0047972 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 9.7e-13 77.4 130 43.8
arahy.Tifrunner.gnm1.ann1.ILFA61 Arachis hypogaea HOM05D000627 ORTHO05D000365 1.3e-12 77.0 150 42.7
Lalb_Chr02g0147481 Lupinus albus HOM05D000627 ORTHO05D000365 1.3e-12 77.0 151 40.4
Psat6g155920 Pisum sativum HOM05D000627 ORTHO05D000365 1.7e-12 76.6 157 42.0
Ah.06g190790 Amaranthus hybridus HOM05D000627 ORTHO05D000365 2.2e-12 76.3 133 43.6
Lalb_Chr18g0046241 Lupinus albus HOM05D000627 ORTHO05D000365 2.2e-12 76.3 132 43.9
PGR083G1143 Punica granatum HOM05D000627 ORTHO05D000365 2.2e-12 76.3 134 43.3
Oeu061909.1 Olea europaea HOM05D000627 ORTHO05D000365 2.8e-12 75.9 139 42.4
Sc16g0009430 Simmondsia chinensis HOM05D000627 ORTHO05D000365 2.8e-12 75.9 150 42.7
MSTRG.16434 Avicennia marina HOM05D000627 ORTHO05D000365 4.8e-12 75.1 150 39.3
ECA234G3746 Erigeron canadensis HOM05D000627 ORTHO05D000365 4.8e-12 75.1 139 41.7
vmacro01664 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 4.8e-12 75.1 146 41.8
DCAR_029297 Daucus carota HOM05D000627 ORTHO05D000365 6.3e-12 74.7 151 38.4
Gorai.007G309400 Gossypium raimondii HOM05D000627 ORTHO05D000365 6.3e-12 74.7 154 39.6
Nn3g21980 Nelumbo nucifera HOM05D000627 ORTHO05D000365 6.3e-12 74.7 158 40.5
Sc09g0002390 Simmondsia chinensis HOM05D000627 ORTHO05D000365 6.3e-12 74.7 138 44.2
Aqoxy2G02438 Aquilegia oxysepala HOM05D000627 ORTHO05D000365 8.2e-12 74.3 150 44.0
arahy.Tifrunner.gnm1.ann1.03LME3 Arachis hypogaea HOM05D000627 ORTHO05D000365 8.2e-12 74.3 131 45.8
CDE12G0382 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 8.2e-12 74.3 118 44.9
BolC8t52480H Brassica oleracea HOM05D000627 ORTHO05D000365 1.1e-11 73.9 139 41.0
TPR.G1653 Trifolium pratense HOM05D000627 ORTHO05D000365 1.1e-11 73.9 150 41.3
Actinidia22852 Actinidia chinensis HOM05D000627 ORTHO05D000365 1.4e-11 73.6 150 42.0
arahy.Tifrunner.gnm1.ann1.SDDU5A Arachis hypogaea HOM05D000627 ORTHO05D000365 1.8e-11 73.2 129 45.0
Cc02_g35910 Coffea canephora HOM05D000627 ORTHO05D000365 1.8e-11 73.2 150 39.3
Aa31LG1G5530 Aethionema arabicum HOM05D000627 ORTHO05D000365 2.4e-11 72.8 135 41.5
A09p65460 Brassica napus HOM05D000627 ORTHO05D000365 2.4e-11 72.8 139 40.3
BraA09t41891Z Brassica rapa HOM05D000627 ORTHO05D000365 2.4e-11 72.8 139 40.3
Sed0011745 Sechium edule HOM05D000627 ORTHO05D000365 2.4e-11 72.8 147 40.8
C08p49430 Brassica napus HOM05D000627 ORTHO05D000365 4.1e-11 72.0 139 40.3
CARHR009500 Cardamine hirsuta HOM05D000627 ORTHO05D000365 5.3e-11 71.6 141 39.7
A06p06220 Brassica napus HOM05D000627 ORTHO05D000365 9.1e-11 70.9 137 40.9
BraA06t23833Z Brassica rapa HOM05D000627 ORTHO05D000365 9.1e-11 70.9 137 40.9
Carub.0001s0887 Capsella rubella HOM05D000627 ORTHO05D000365 9.1e-11 70.9 139 39.6
Thhalv10007343m.g Eutrema salsugineum HOM05D000627 ORTHO05D000365 9.1e-11 70.9 139 39.6
C05p07530 Brassica napus HOM05D000627 ORTHO05D000365 1.6e-10 70.1 137 40.1
BolC5t29507H Brassica oleracea HOM05D000627 ORTHO05D000365 1.6e-10 70.1 137 40.1
Lj5A302T14 Lonicera japonica HOM05D000627 ORTHO05D000365 2.0e-10 69.7 123 43.9
Sp1g08130 Schrenkiella parvula HOM05D000627 ORTHO05D000365 2.0e-10 69.7 139 38.1
THA.LOC104820437 Tarenaya hassleriana HOM05D000627 ORTHO05D000365 2.6e-10 69.3 153 37.3
Hund07268 Selenicereus undatus HOM05D000627 ORTHO05D000365 4.5e-10 68.6 131 42.7
TAR365G1241 Trochodendron aralioides HOM05D000627 ORTHO05D000365 4.5e-10 68.6 127 43.3
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 5.9e-10 68.2 128 40.6
ATR0796G291 Amborella trichopoda HOM05D000627 ORTHO05D000365 7.7e-10 67.8 146 37.7
Nn4g25302 Nelumbo nucifera HOM05D000627 ORTHO05D000365 7.7e-10 67.8 145 40.0
AT1G09530 Arabidopsis thaliana HOM05D000627 ORTHO05D000365 1.0e-09 67.4 139 38.1
CDE01G0138 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 1.0e-09 67.4 142 40.1
PSO170G0649 Papaver somniferum HOM05D000627 ORTHO05D000365 2.2e-09 66.2 141 39.0
AL1G20050 Arabidopsis lyrata HOM05D000627 ORTHO05D000365 2.9e-09 65.9 140 39.3
Migut.B00888 Erythranthe guttata HOM05D000627 ORTHO05D000365 2.9e-09 65.9 131 42.0
MBI19_g04827_MAGBIO Magnolia biondii HOM05D000627 ORTHO05D000365 2.9e-09 65.9 141 40.4
PSO357G0182 Papaver somniferum HOM05D000627 ORTHO05D000365 2.9e-09 65.9 141 39.0
Medtr7g111320 Medicago truncatula HOM05D000627 ORTHO05D000365 3.8e-09 65.5 150 38.7
BcaC07g41876 Brassica carinata HOM05D000627 ORTHO05D000365 5.0e-09 65.1 138 37.0
Sed0026237 Sechium edule HOM05D000627 ORTHO05D000365 5.0e-09 65.1 150 39.3
VMungo1383G0894 Vigna mungo HOM05D000627 ORTHO05D000365 5.0e-09 65.1 161 36.0
Mapoly0039s0059 Marchantia polymorpha HOM05D000627 ORTHO05D000365 6.5e-09 64.7 172 32.6
Dinv30953 Davidia involucrata HOM05D000627 ORTHO05D000365 8.5e-09 64.3 94 48.9
SGA_v2.0_scaffold279G46773 Striga asiatica HOM05D000627 ORTHO05D000365 8.5e-09 64.3 153 39.9
AUR62003896 Chenopodium quinoa HOM05D000627 ORTHO05D000365 1.9e-08 63.2 72 50.0
PGR031G0109 Punica granatum HOM05D000627 ORTHO05D000365 1.9e-08 63.2 136 38.2
AUR62006825 Chenopodium quinoa HOM05D000627 ORTHO05D000365 2.5e-08 62.8 130 45.4
AUR62000483 Chenopodium quinoa HOM05D000627 ORTHO05D000365 4.2e-08 62.0 123 45.5
HanXRQChr10g0294441 Helianthus annuus HOM05D000627 ORTHO05D000365 5.5e-08 61.6 121 42.1
MBI07_g08928_MAGBIO Magnolia biondii HOM05D000627 ORTHO05D000365 1.6e-07 60.1 124 41.1
Nitab4.5_0000813g0080 Nicotiana tabacum HOM05D000627 ORTHO05D000365 2.1e-07 59.7 45 66.7
Nn1g03096 Nelumbo nucifera HOM05D000627 ORTHO05D000365 2.7e-07 59.3 144 36.8
Thecc.01G326400 Theobroma cacao HOM05D000627 ORTHO05D000365 3.6e-07 58.9 130 39.2
Lsat_1_v5_gn_9_11161 Lactuca sativa HOM05D000627 ORTHO05D000365 4.7e-07 58.5 149 37.6
CiPaw.07G126500 Carya illinoinensis HOM05D000627 ORTHO05D000365 8.0e-07 57.8 124 38.7
Lsat_1_v5_gn_5_179121 Lactuca sativa HOM05D000627 ORTHO05D000365 8.0e-07 57.8 150 36.7
ECA247G1435 Erigeron canadensis HOM05D000627 ORTHO05D000365 1.0e-06 57.4 98 44.9
Psat0s354g0040 Pisum sativum HOM05D000627 ORTHO05D000365 1.4e-06 57.0 153 39.2
SalBow4G2758 Salvia bowleyana HOM05D000627 ORTHO05D000365 1.4e-06 57.0 138 35.5
HPP92_012760 Vanilla planifolia HOM05D000627 ORTHO05D000365 1.4e-06 57.0 139 38.1
MD15G1285600 Malus domestica HOM05D000627 ORTHO05D000365 1.8e-06 56.6 94 42.6
Potri.002G055400 Populus trichocarpa HOM05D000627 ORTHO05D000365 1.8e-06 56.6 102 40.2
Medtr1g069155 Medicago truncatula HOM05D000627 ORTHO05D000365 2.3e-06 56.2 143 37.1
Zm00001eb059460 Zea mays HOM05D000627 ORTHO05D000365 2.3e-06 56.2 152 36.2
Aqoxy1G01549 Aquilegia oxysepala HOM05D000595 ORTHO05D000365 3.0e-06 55.8 128 37.5
RcHm_v2.0_Chr2g0152511 Rosa chinensis HOM05D000627 ORTHO05D000365 3.0e-06 55.8 123 42.3
CDE02G3441 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 4.0e-06 55.5 127 38.6
COL.COLO4_23118 Corchorus olitorius HOM05D000627 ORTHO05D000365 4.0e-06 55.5 144 34.0
PSO541G0766 Papaver somniferum HOM05D000627 ORTHO05D000365 4.0e-06 55.5 140 35.7
PGR042G1873 Punica granatum HOM05D000627 ORTHO05D000365 4.0e-06 55.5 140 36.4
TWI59G1086 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 4.0e-06 55.5 151 35.8
TAR636G2769 Trochodendron aralioides HOM05D000627 ORTHO05D000365 4.0e-06 55.5 157 35.7
MELO3C026410.2 Cucumis melo HOM05D000627 ORTHO05D000365 5.2e-06 55.1 149 36.2
MD17G1132600 Malus domestica HOM05D000627 ORTHO05D000365 5.2e-06 55.1 140 37.9
Os03g0782500 Oryza sativa ssp. japonica HOM05D000627 ORTHO05D000365 5.2e-06 55.1 143 36.4
Sabra02G0044900 Salix brachista HOM05D002607 ORTHO05D006782 5.2e-06 55.1 141 34.8
Pp3c1_38820 Physcomitrium patens HOM05D000627 ORTHO05D000365 6.7e-06 54.7 158 32.3
QL04p059825 Quercus lobata HOM05D000627 ORTHO05D000365 6.7e-06 54.7 140 37.9
TAR633G1458 Trochodendron aralioides HOM05D000627 ORTHO05D000365 6.7e-06 54.7 104 39.4
MSTRG.12504 Avicennia marina HOM05D000627 ORTHO05D000365 8.8e-06 54.3 146 34.2
Gohir.A07G131900 Gossypium hirsutum HOM05D000627 ORTHO05D000365 8.8e-06 54.3 143 38.5
PSO675G8504 Papaver somniferum HOM05D000627 ORTHO05D000365 8.8e-06 54.3 143 37.1
Psat0s354g0200 Pisum sativum HOM05D000627 ORTHO05D000365 8.8e-06 54.3 151 38.4


User provided reference genes

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