Gene: Sc16g0009430

General Information

Structural Information

  • Species Simmondsia chinensis
  • Gene Identifier Sc16g0009430
  • Transcript Identifier Sc16g0009430.01
  • Gene Type Coding gene
  • Location GWHAASQ00000016 : 29428934-29433019 : positive

Gene Family Information

  • ID HOM05D000627
  • #Genes/#Species 910/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sc16g0009430.01

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT3G59060
GO:0090229
ISO
PLAZA Integrative Orthologynegative regulation of red or far-red light signaling pathway Os01g0286100
GO:0010244
ISO
PLAZA Integrative Orthologyresponse to low fluence blue light stimulus by blue low-fluence system AT3G59060
GO:0010600
ISO
PLAZA Integrative Orthologyregulation of auxin biosynthetic process AT3G59060
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT3G59060
GO:0009639
ISO
PLAZA Integrative Orthologyresponse to red or far red light AT1G09530
GO:0080006
ISO
PLAZA Integrative Orthologyinternode patterning Os03g0782500
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT1G09530
GO:0009641
ISO
PLAZA Integrative Orthologyshade avoidance AT2G46970
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT1G09530
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction AT1G09530
GO:0042548
ISO
PLAZA Integrative Orthologyregulation of photosynthesis, light reaction AT1G09530
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT1G09530
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Os03g0782500
GO:0009704
ISO
PLAZA Integrative Orthologyde-etiolation AT1G09530
GO:0031539
ISO
PLAZA Integrative Orthologypositive regulation of anthocyanin metabolic process AT1G09530
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT2G46970
GO:0080113
ISO
PLAZA Integrative Orthologyregulation of seed growth Os05g0139100
GO:0009693
ISO
PLAZA Integrative Orthologyethylene biosynthetic process AT3G59060
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G09530
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT1G09530
GO:0046983
IEA
InterProprotein dimerization activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G09530
GO:1990841
ISO
PLAZA Integrative Orthologypromoter-specific chromatin binding AT3G59060
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G09530
GO:0003700
IEA
InterProDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR044273 Transcription factor PIF3-like
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.1.1.7 External stimuli response.light.red/far red light.transcriptional regulator (PIF)