Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008797g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 2.2e-32 141.7 74 100.0
Nitab4.5_0000759g0080 Nicotiana tabacum HOM05D007833 ORTHO05D009855 4.6e-30 134.0 74 94.6
CAN.G1682.20 Capsicum annuum HOM05D007833 ORTHO05D009855 1.4e-26 122.5 76 86.8
PGSC0003DMG400020049 Solanum tuberosum HOM05D007833 ORTHO05D009855 2.0e-25 118.6 75 85.3
Sopen06g035690 Solanum pennellii HOM05D007833 ORTHO05D009855 5.4e-23 110.5 68 86.8
Solyc06g084300.1 Solanum lycopersicum HOM05D007833 ORTHO05D009855 3.9e-21 104.4 68 82.4
Peaxi162Scf00783g00321 Petunia axillaris HOM05D007833 ORTHO05D009855 1.8e-18 95.5 67 79.1
Nitab4.5_0001028g0100 Nicotiana tabacum HOM05D007833 ORTHO05D009855 5.3e-18 94.0 74 68.9
Hma1.2p1_0628F.1_g192040 Hydrangea macrophylla HOM05D007833 ORTHO05D009855 9.0e-18 93.2 65 76.9
Nitab4.5_0014943g0010 Nicotiana tabacum HOM05D007833 ORTHO05D009855 1.5e-17 92.4 74 70.3
Oeu028084.1 Olea europaea HOM05D007833 ORTHO05D009855 4.9e-16 87.4 66 68.2
PGSC0003DMG400001195 Solanum tuberosum HOM05D007833 ORTHO05D009855 8.4e-16 86.7 74 66.2
Lsat_1_v5_gn_9_4081 Lactuca sativa HOM05D007833 ORTHO05D009855 1.4e-15 85.9 67 68.7
CSS0012022 Camellia sinensis var. sinensis HOM05D007833 ORTHO05D009855 2.4e-15 85.1 61 70.5
AUR62036454 Chenopodium quinoa HOM05D007833 ORTHO05D009855 3.2e-15 84.7 50 80.0
COL.COLO4_09117 Corchorus olitorius HOM05D003232 ORTHO05D003584 9.3e-15 83.2 65 64.6
Actinidia00743 Actinidia chinensis HOM05D002055 ORTHO05D002120 1.2e-14 82.8 56 75.0
Duzib133G1414 Durio zibethinus HOM05D007833 ORTHO05D009855 1.6e-14 82.4 50 78.0
FAN20G1309 Fragaria x ananassa HOM05D007833 ORTHO05D009855 1.6e-14 82.4 70 64.3
Thecc.01G281600 Theobroma cacao HOM05D007833 ORTHO05D009855 2.1e-14 82.0 66 68.2
TAR365G0564 Trochodendron aralioides HOM05D007833 ORTHO05D009855 2.1e-14 82.0 67 68.7
MBI04_g33966_MAGBIO Magnolia biondii HOM05D007833 ORTHO05D009855 3.5e-14 81.3 55 72.7
Rhsim13G0023900 Rhododendron simsii HOM05D007833 ORTHO05D009855 4.6e-14 80.9 62 71.0
TWI59G0429 Tripterygium wilfordii HOM05D007833 ORTHO05D009855 4.6e-14 80.9 65 64.6
Nn1g02183 Nelumbo nucifera HOM05D007833 ORTHO05D009855 6.0e-14 80.5 47 85.1
QL12p022146 Quercus lobata HOM05D007833 ORTHO05D009855 6.0e-14 80.5 68 63.2
Dinv11245 Davidia involucrata HOM05D003232 ORTHO05D003584 7.9e-14 80.1 65 64.6
ECA247G0823 Erigeron canadensis HOM05D007833 ORTHO05D009855 1.0e-13 79.7 69 63.8
Prupe.8G242800 Prunus persica HOM05D007833 ORTHO05D009855 1.0e-13 79.7 60 68.3
FvH4_2g23750 Fragaria vesca HOM05D007833 ORTHO05D009855 1.3e-13 79.3 66 63.6
FAN24G2170 Fragaria x ananassa HOM05D007833 ORTHO05D009855 1.3e-13 79.3 66 63.6
Haze_04727 Corylus avellana HOM05D001305 ORTHO05D007147 1.8e-13 79.0 62 71.0
MD11G1287600 Malus domestica HOM05D007833 ORTHO05D009855 2.3e-13 78.6 59 67.8
Potri.005G208100 Populus trichocarpa HOM05D007833 ORTHO05D009855 2.3e-13 78.6 57 71.9
EL10Ac7g17570 Beta vulgaris HOM05D007833 ORTHO05D009855 6.7e-13 77.0 65 63.1
Atru.chr5.1399 Acer truncatum HOM05D007833 ORTHO05D009855 8.7e-13 76.6 59 71.2
Cc01_g19620 Coffea canephora HOM05D007833 ORTHO05D009855 8.7e-13 76.6 69 63.8
Gorai.004G081500 Gossypium raimondii HOM05D007833 ORTHO05D009855 8.7e-13 76.6 72 59.7
RcHm_v2.0_Chr6g0291241 Rosa chinensis HOM05D007833 ORTHO05D009855 8.7e-13 76.6 67 62.7
AUR62017101 Chenopodium quinoa HOM05D007833 ORTHO05D009855 1.1e-12 76.3 65 60.0
Manes.01G208800 Manihot esculenta HOM05D007833 ORTHO05D009855 1.1e-12 76.3 56 71.4
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 1.1e-12 76.3 51 74.5
vmacro02562 Vaccinium macrocarpon HOM05D007833 ORTHO05D009855 1.1e-12 76.3 49 75.5
Cfa006126 Carpinus fangiana HOM05D007833 ORTHO05D009855 1.5e-12 75.9 62 69.4
Gohir.A08G068400 Gossypium hirsutum HOM05D007833 ORTHO05D009855 1.5e-12 75.9 53 69.8
Gohir.D08G076800 Gossypium hirsutum HOM05D007833 ORTHO05D009855 1.9e-12 75.5 72 59.7
CANSAT25G0416 Cannabis sativa HOM05D007833 ORTHO05D009855 2.5e-12 75.1 73 58.9
Ah.04g166580 Amaranthus hybridus HOM05D007833 ORTHO05D009855 3.3e-12 74.7 50 74.0
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 4.3e-12 74.3 66 65.2
CiPaw.07G092800 Carya illinoinensis HOM05D007833 ORTHO05D009855 4.3e-12 74.3 61 67.2
ClCG07G000180 Citrullus lanatus HOM05D007833 ORTHO05D009855 5.6e-12 73.9 61 65.6
Duzib138G0003 Durio zibethinus HOM05D007833 ORTHO05D009855 7.4e-12 73.6 60 66.7
Eucgr.K03378 Eucalyptus grandis HOM05D007833 ORTHO05D009855 9.6e-12 73.2 54 75.9
Sp5g09880 Schrenkiella parvula HOM05D007833 ORTHO05D009855 9.6e-12 73.2 54 64.8
BcaC06g32911 Brassica carinata HOM05D007833 ORTHO05D009855 1.3e-11 72.8 54 64.8
BcaC06g33387 Brassica carinata HOM05D007833 ORTHO05D009855 1.3e-11 72.8 54 64.8
C07p46950 Brassica napus HOM05D000938 ORTHO05D001451 1.3e-11 72.8 54 64.8
BolC7t45211H Brassica oleracea HOM05D000938 ORTHO05D001451 1.3e-11 72.8 54 64.8
MD03G1267100 Malus domestica HOM05D007833 ORTHO05D009855 2.1e-11 72.0 63 65.1
Sc24g0003060 Simmondsia chinensis HOM05D007833 ORTHO05D009855 2.1e-11 72.0 63 61.9
SalBow6G6192 Salvia bowleyana HOM05D007833 ORTHO05D009855 2.8e-11 71.6 65 58.5
Ciclev10023167m.g Citrus clementina HOM05D007833 ORTHO05D009855 3.7e-11 71.2 44 79.5
Potri.002G054700 Populus trichocarpa HOM05D007833 ORTHO05D009855 3.7e-11 71.2 59 66.1
A03p48860 Brassica napus HOM05D000938 ORTHO05D001451 4.8e-11 70.9 54 63.0
BraA03t13987Z Brassica rapa HOM05D000938 ORTHO05D001451 4.8e-11 70.9 54 63.0
Peaxi162Scf00570g00076 Petunia axillaris HOM05D007833 ORTHO05D009855 6.2e-11 70.5 71 54.9
Carub.0005s1877 Capsella rubella HOM05D007833 ORTHO05D009855 8.1e-11 70.1 65 55.4
CARHR162190 Cardamine hirsuta HOM05D007833 ORTHO05D009855 1.1e-10 69.7 59 57.6
AT3G52420 Arabidopsis thaliana HOM05D007833 ORTHO05D009855 3.1e-10 68.2 61 55.7
CsaV3_6G037060 Cucumis sativus L. HOM05D007833 ORTHO05D009855 4.0e-10 67.8 58 65.5
Migut.N02161 Erythranthe guttata HOM05D007833 ORTHO05D009855 4.0e-10 67.8 67 59.7
Glyma.19G154700 Glycine max HOM05D007833 ORTHO05D009855 6.9e-10 67.0 53 67.9
AL5G33070 Arabidopsis lyrata HOM05D007833 ORTHO05D009855 1.5e-09 65.9 64 53.1
Cpa.g.sc52.17 Carica papaya HOM05D007833 ORTHO05D009855 1.5e-09 65.9 50 64.0
Phvul.001G149800 Phaseolus vulgaris HOM05D007833 ORTHO05D009855 1.5e-09 65.9 59 64.4
Sed0020364 Sechium edule HOM05D007833 ORTHO05D009855 2.0e-09 65.5 65 55.4
Psat3g064960 Pisum sativum HOM05D007833 ORTHO05D009855 2.6e-09 65.1 65 55.4
PGR044G2487 Punica granatum HOM05D007833 ORTHO05D009855 3.4e-09 64.7 37 81.1
Glyma.03G152200 Glycine max HOM05D007833 ORTHO05D009855 5.8e-09 63.9 53 66.0
Glyma.17G209300 Glycine max HOM05D007833 ORTHO05D009855 5.8e-09 63.9 62 61.3
Lj1g0020293 Lotus japonicus HOM05D007833 ORTHO05D009855 7.6e-09 63.5 43 72.1
Potri.017G127350 Populus trichocarpa HOM05D007833 ORTHO05D009855 7.6e-09 63.5 55 63.6
Medtr7g094710 Medicago truncatula HOM05D007833 ORTHO05D009855 1.7e-08 62.4 43 72.1
Migut.K01062 Erythranthe guttata HOM05D007833 ORTHO05D009855 2.2e-08 62.0 44 68.2
Thhalv10010886m.g Eutrema salsugineum HOM05D007833 ORTHO05D009855 2.2e-08 62.0 45 66.7
TPR.G26603 Trifolium pratense HOM05D007833 ORTHO05D009855 6.5e-08 60.5 43 69.8
HPP92_007464 Vanilla planifolia HOM05D027844 ORTHO05D009855 1.1e-07 59.7 68 48.5
MSTRG.12567 Avicennia marina HOM05D007833 ORTHO05D009855 3.2e-07 58.2 43 67.4
arahy.Tifrunner.gnm1.ann1.1H9ESI Arachis hypogaea HOM05D007833 ORTHO05D009855 4.2e-07 57.8 62 54.8
Ca_08575_v3 Cicer arietinum L. HOM05D007833 ORTHO05D009855 4.2e-07 57.8 54 63.0
unitig_0.g1010 Utricularia gibba HOM05D007833 ORTHO05D009855 2.1e-06 55.5 59 52.5
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 3.5e-06 54.7 47 53.2
AUR62036455 Chenopodium quinoa HOM05D045935 ORTHO05D009855 3.5e-06 54.7 39 64.1
HanXRQChr10g0282781 Helianthus annuus HOM05D007833 ORTHO05D009855 4.6e-06 54.3 41 70.7


User provided reference genes

Program Settings