Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 4.0e-158 561.6 331 100.0
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 3.0e-145 518.8 358 88.0
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 2.8e-135 485.7 364 82.1
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 1.7e-124 449.9 320 80.0
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 7.1e-123 444.5 318 79.6
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 1.6e-122 443.4 318 79.2
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 5.5e-107 391.7 373 67.6
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 8.7e-105 384.4 364 68.4
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 4.8e-103 378.6 346 70.2
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.0e-100 370.9 362 67.7
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 5.0e-100 368.6 363 66.1
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 2.7e-98 362.8 334 68.6
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 2.3e-97 359.8 300 69.3
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 3.0e-97 359.4 353 66.9
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 1.9e-96 356.7 348 61.8
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.3e-96 355.5 358 64.0
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 7.4e-96 354.8 350 66.0
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 3.7e-95 352.4 375 64.3
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 2.4e-94 349.7 273 71.8
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 4.1e-94 349.0 305 66.6
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 5.3e-94 348.6 367 65.7
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 1.2e-93 347.4 306 67.0
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 2.0e-93 346.7 372 63.4
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 2.6e-93 346.3 353 59.2
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 5.0e-92 342.0 286 71.0
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 2.5e-91 339.7 349 63.9
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 3.2e-91 339.3 295 67.1
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 3.2e-91 339.3 290 67.6
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 7.2e-91 338.2 359 63.2
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 9.4e-91 337.8 290 66.9
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 9.4e-91 337.8 295 67.1
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 1.2e-90 337.4 292 66.4
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 1.6e-90 337.0 359 64.9
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 3.6e-90 335.9 357 63.3
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 4.6e-90 335.5 373 59.0
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 1.8e-89 333.6 350 63.7
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 3.0e-89 332.8 340 59.4
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 5.1e-89 332.0 304 65.8
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 8.8e-89 331.3 378 60.8
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 1.5e-88 330.5 340 63.5
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.5e-88 330.5 325 60.3
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 4.3e-88 328.9 352 61.6
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 4.3e-88 328.9 400 57.2
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 9.7e-88 327.8 258 70.5
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 1.3e-87 327.4 379 58.6
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 1.7e-87 327.0 295 62.7
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 1.7e-87 327.0 353 60.9
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 1.7e-87 327.0 364 61.8
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 2.8e-87 326.2 253 72.3
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 6.3e-87 325.1 351 63.2
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 6.3e-87 325.1 266 69.5
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 1.4e-86 323.9 290 63.8
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 1.4e-86 323.9 354 59.9
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 1.8e-86 323.6 308 62.7
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 1.8e-86 323.6 262 71.0
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 2.4e-86 323.2 297 62.3
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 2.4e-86 323.2 327 59.6
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 2.4e-86 323.2 377 55.7
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 6.9e-86 321.6 332 58.7
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 1.2e-85 320.9 286 65.0
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 2.0e-85 320.1 293 63.5
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 3.4e-85 319.3 389 56.3
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 3.4e-85 319.3 340 57.4
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 4.5e-85 318.9 258 70.9
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 4.5e-85 318.9 291 68.7
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 4.5e-85 318.9 282 65.2
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 1.3e-84 317.4 290 63.8
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 2.9e-84 316.2 351 59.3
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 1.4e-83 313.9 359 59.6
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 1.9e-83 313.5 366 56.3
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 9.4e-83 311.2 349 58.7
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 9.4e-83 311.2 352 55.1
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 1.6e-82 310.5 310 60.0
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 2.7e-82 309.7 303 60.4
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 4.7e-82 308.9 303 60.1
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 4.7e-82 308.9 303 61.1
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 6.1e-82 308.5 291 62.2
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 1.0e-81 307.8 361 57.3
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 1.0e-81 307.8 376 54.5
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 1.0e-81 307.8 293 61.8
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 1.0e-81 307.8 310 61.9
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 1.8e-81 307.0 297 59.6
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 2.3e-81 306.6 291 61.9
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 2.3e-81 306.6 297 60.9
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 1.5e-80 303.9 296 60.8
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 1.5e-80 303.9 299 59.2
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 1.5e-80 303.9 357 56.0
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 3.3e-80 302.8 367 54.0
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 4.4e-80 302.4 283 62.9
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 4.4e-80 302.4 283 62.2
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 1.3e-79 300.8 300 60.7
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 1.3e-79 300.8 347 56.8
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 1.3e-79 300.8 302 60.9
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 4.8e-79 298.9 357 59.4
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 4.8e-79 298.9 299 58.9
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 2.0e-77 293.5 291 57.7
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 3.5e-77 292.7 291 57.4
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-75 286.6 309 57.6
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.2e-75 286.2 309 57.0
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 7.2e-75 285.0 386 55.2
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 9.4e-75 284.6 311 59.8
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 1.2e-74 284.3 354 51.1
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.2e-74 284.3 309 57.3
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 2.1e-74 283.5 309 57.3
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.6e-74 282.7 309 56.6
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 6.1e-74 282.0 309 57.0
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 4.8e-71 272.3 329 59.6
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 4.1e-70 269.2 233 65.7
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 4.1e-70 269.2 274 60.9
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 1.8e-65 253.8 262 55.3
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 5.2e-65 252.3 230 60.4
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 1.3e-63 247.7 225 61.8
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 4.5e-61 239.2 147 87.1
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 1.5e-59 234.2 186 68.8
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 9.5e-59 231.5 240 55.8
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 5.2e-57 225.7 186 80.6
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 1.5e-56 224.2 282 49.6
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 2.8e-55 219.9 303 47.2
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 1.6e-53 214.2 122 91.8
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 4.3e-51 206.1 232 54.3
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 1.8e-49 200.7 332 43.4
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 1.2e-48 198.0 259 51.0
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 6.4e-47 192.2 225 53.3
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 2.3e-44 183.7 228 50.0
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 5.0e-44 182.6 180 63.9
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 8.6e-44 181.8 148 68.2
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 1.5e-43 181.0 252 46.4
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 1.4e-41 174.5 165 57.6
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 1.4e-41 174.5 165 57.6
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 1.2e-32 144.8 242 40.5
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 3.2e-30 136.7 99 74.7
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 4.0e-25 119.8 157 47.8
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 8.4e-23 112.1 124 54.8
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 8.6e-20 102.1 62 83.9
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 4.3e-19 99.8 126 51.6
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 8.4e-15 85.5 74 67.6
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 1.1e-14 85.1 56 80.4
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 5.4e-14 82.8 255 30.6
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 7.1e-14 82.4 62 67.7
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 4.8e-10 69.7 67 62.7
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 1.1e-09 68.6 69 55.1
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 9.0e-09 65.5 37 81.1
MBI14_g41770_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.0e-08 64.3 74 55.4
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 1.1e-06 58.5 67 55.2
MBI03_g15603_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 5.4e-06 56.2 66 51.5


User provided reference genes

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