Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.5e-33 144.8 72 100.0
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 4.5e-22 107.5 61 86.9
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-21 105.5 60 83.3
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 5.0e-21 104.0 61 85.2
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 5.0e-21 104.0 60 86.7
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 6.5e-21 103.6 59 88.1
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 1.1e-20 102.8 60 83.3
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 1.4e-20 102.4 61 83.6
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 1.9e-20 102.1 59 84.7
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.2e-20 100.9 60 85.0
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 9.3e-20 99.8 61 82.0
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 1.2e-19 99.4 62 83.9
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 2.1e-19 98.6 61 82.0
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 2.1e-19 98.6 61 80.3
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.3e-18 95.1 60 80.0
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 2.3e-18 95.1 61 82.0
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.0e-18 94.7 59 79.7
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.7e-18 93.6 59 81.4
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 6.7e-18 93.6 60 76.7
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 6.7e-18 93.6 60 76.7
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 1.1e-17 92.8 61 75.4
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 2.5e-17 91.7 59 76.3
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 4.3e-17 90.9 61 78.7
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 7.4e-17 90.1 63 76.2
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 1.3e-16 89.4 55 80.0
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 1.3e-16 89.4 61 80.3
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-16 88.6 61 77.0
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-16 88.6 61 77.0
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-16 88.6 61 77.0
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-16 88.6 59 76.3
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-16 88.6 61 77.0
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-16 88.6 61 77.0
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-16 88.6 61 77.0
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 2.8e-16 88.2 60 76.7
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 3.7e-16 87.8 61 77.0
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 3.7e-16 87.8 60 76.7
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-16 87.0 59 76.3
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 8.2e-16 86.7 61 75.4
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 8.2e-16 86.7 61 75.4
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-15 86.3 61 75.4
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 2.4e-15 85.1 54 77.8
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 5.3e-15 84.0 70 67.1
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 5.3e-15 84.0 60 73.3
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 6.9e-15 83.6 69 68.1
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 6.9e-15 83.6 61 72.1
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-14 82.8 62 71.0
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-14 81.6 61 70.5
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 3.4e-14 81.3 100 50.0
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 4.5e-14 80.9 61 70.5
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 5.9e-14 80.5 70 64.3
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 7.7e-14 80.1 100 49.0
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 7.7e-14 80.1 59 72.9
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 7.7e-14 80.1 57 73.7
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.3e-13 79.3 50 76.0
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 2.2e-13 78.6 66 66.7
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-13 78.6 60 68.3
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-13 78.2 61 70.5
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 6.5e-13 77.0 61 72.1
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 6.5e-13 77.0 61 70.5
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 8.5e-13 76.6 68 63.2
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 1.1e-12 76.3 66 65.2
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 1.1e-12 76.3 66 65.2
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 1.1e-12 76.3 66 65.2
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 1.1e-12 76.3 66 65.2
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 1.1e-12 76.3 66 65.2
Nitab4.5_0004099g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.4e-12 75.9 59 69.5
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 2.5e-12 75.1 66 63.6
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 3.2e-12 74.7 100 47.0
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 7.2e-12 73.6 100 48.0
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 9.4e-12 73.2 53 71.7
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 1.2e-11 72.8 66 62.1
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-11 72.4 50 76.0
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 2.7e-11 71.6 66 62.1
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 1.8e-10 68.9 66 60.6
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-10 68.9 50 74.0
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 2.3e-10 68.6 60 65.0
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 3.0e-10 68.2 61 63.9
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 3.9e-10 67.8 100 46.0
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-09 65.5 50 70.0
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 5.7e-09 63.9 56 57.1
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 3.7e-08 61.2 54 61.1
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-08 60.5 50 70.0
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-08 60.5 45 71.1
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-08 60.5 45 71.1
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 6.3e-08 60.5 35 85.7
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 1.8e-07 58.9 52 63.5
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 1.5e-06 55.8 50 68.0
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.5e-06 54.3 35 77.1
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 7.7e-06 53.5 50 66.0


User provided reference genes

Program Settings