Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 6.7e-67 257.3 137 100.0
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 3.0e-59 231.9 145 89.0
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 3.9e-59 231.5 137 91.2
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 2.4e-48 195.7 137 78.1
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 1.2e-47 193.4 137 76.6
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 2.0e-47 192.6 137 75.9
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.3e-41 173.3 137 72.3
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 4.2e-37 158.3 128 68.0
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 3.3e-34 148.7 135 61.5
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.7e-33 146.4 136 62.5
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 8.2e-33 144.1 135 57.8
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 1.3e-30 136.7 132 56.8
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 2.5e-29 132.5 134 53.7
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.2e-28 130.2 137 55.5
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 6.1e-28 127.9 134 57.5
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 1.4e-27 126.7 131 53.4
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 2.3e-27 125.9 132 54.5
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 3.9e-27 125.2 134 54.5
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 5.2e-27 124.8 138 52.9
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 7.4e-26 120.9 130 55.4
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 9.7e-26 120.6 130 56.9
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 1.3e-25 120.2 137 51.1
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 1.7e-25 119.8 126 51.6
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.7e-25 119.8 127 55.9
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 4.8e-25 118.2 134 53.7
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 8.2e-25 117.5 137 51.1
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 8.2e-25 117.5 126 53.2
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 2.4e-24 115.9 124 53.2
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 4.1e-24 115.2 131 48.9
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 4.1e-24 115.2 133 53.4
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 5.3e-24 114.8 136 48.5
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 7.0e-24 114.4 134 51.5
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 1.2e-23 113.6 136 50.0
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 1.2e-23 113.6 132 49.2
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.6e-23 113.2 132 48.5
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 3.5e-23 112.1 127 48.0
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 4.5e-23 111.7 136 50.7
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 1.0e-22 110.5 133 49.6
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 1.0e-22 110.5 133 49.6
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 1.0e-22 110.5 133 49.6
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 1.3e-22 110.2 131 51.1
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 3.8e-22 108.6 130 50.0
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 3.8e-22 108.6 136 45.6
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 5.0e-22 108.2 136 47.8
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 6.5e-22 107.8 137 46.7
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 6.5e-22 107.8 132 53.0
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 1.1e-21 107.1 132 50.0
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 1.5e-21 106.7 129 49.6
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 1.5e-21 106.7 137 46.0
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 1.5e-21 106.7 135 50.4
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.5e-21 106.7 134 50.0
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 1.9e-21 106.3 137 46.0
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 2.5e-21 105.9 134 46.3
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 2.5e-21 105.9 134 50.0
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 5.5e-21 104.8 134 47.8
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 9.4e-21 104.0 135 44.4
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 1.2e-20 103.6 130 48.5
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 1.6e-20 103.2 126 48.4
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 2.1e-20 102.8 137 46.7
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 3.6e-20 102.1 137 46.0
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 4.7e-20 101.7 135 43.0
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 6.1e-20 101.3 129 45.7
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 8.0e-20 100.9 132 47.7
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 1.0e-19 100.5 130 48.5
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 1.8e-19 99.8 129 45.0
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 2.3e-19 99.4 130 49.2
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 3.0e-19 99.0 132 45.5
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.0e-19 98.6 133 47.4
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 4.0e-19 98.6 130 45.4
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 4.0e-19 98.6 132 47.0
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 5.2e-19 98.2 136 47.1
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 2.6e-18 95.9 132 47.0
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 3.4e-18 95.5 137 41.6
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 7.5e-18 94.4 134 44.0
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 2.2e-17 92.8 111 49.5
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.8e-17 92.4 136 42.6
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 3.7e-17 92.0 136 39.7
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 3.7e-17 92.0 136 42.6
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 4.8e-17 91.7 133 48.9
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 6.3e-17 91.3 134 44.0
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 8.3e-17 90.9 136 42.6
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 2.4e-16 89.4 132 41.7
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 5.3e-16 88.2 137 43.8
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 5.3e-16 88.2 141 41.8
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 7.0e-16 87.8 141 41.1
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 9.1e-16 87.4 103 51.5
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 9.1e-16 87.4 126 46.8
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 9.1e-16 87.4 136 40.4
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 1.2e-15 87.0 126 40.5
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 1.2e-15 87.0 137 43.1
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 2.0e-15 86.3 142 44.4
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 2.0e-15 86.3 132 43.2
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.2e-14 82.8 61 70.5
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.2e-14 82.8 61 70.5
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 2.9e-14 82.4 133 44.4
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 1.5e-13 80.1 132 38.6
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 1.9e-13 79.7 135 45.2
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 1.9e-13 79.7 133 40.6
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 2.5e-13 79.3 130 40.8
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.5e-13 79.3 130 40.8
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.2e-13 78.6 130 40.0
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 5.5e-13 78.2 117 43.6
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 5.5e-13 78.2 135 40.0
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 7.2e-13 77.8 135 39.3
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 9.4e-13 77.4 130 39.2
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 9.4e-13 77.4 130 40.0
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.2e-12 77.0 127 38.6
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 3.6e-12 75.5 134 39.6
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 8.0e-12 74.3 126 39.7
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 1.4e-11 73.6 126 43.7
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 4.0e-11 72.0 129 38.8
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 6.8e-11 71.2 138 40.6
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 2.6e-10 69.3 132 36.4
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 9.8e-10 67.4 132 34.1
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 1.7e-09 66.6 131 35.1
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.2e-09 66.2 132 33.3
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 8.3e-09 64.3 134 35.1
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 8.3e-09 64.3 134 35.1
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 2.4e-08 62.8 132 35.6
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.3e-06 57.0 36 75.0
TAR636G1761 Trochodendron aralioides HOM05D004159 ORTHO05D415208 2.3e-06 56.2 74 45.9
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 6.6e-06 54.7 135 33.3
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 8.6e-06 54.3 134 31.3


User provided reference genes

Program Settings