Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008345g0020 Nicotiana tabacum HOM05D006440 ORTHO05D003987 0.0e+00 1155.6 562 100.0
Sopen09g032600 Solanum pennellii HOM05D006440 ORTHO05D003987 4.9e-265 917.5 497 90.3
CAN.G793.7 Capsicum annuum HOM05D006440 ORTHO05D003987 7.0e-256 887.1 501 87.2
Solyc09g089660.4 Solanum lycopersicum HOM05D006440 ORTHO05D003987 2.9e-241 838.6 456 90.1
CSS0026181 Camellia sinensis var. sinensis HOM05D006440 ORTHO05D003987 2.4e-232 808.9 511 78.1
Oeu025570.2 Olea europaea HOM05D006440 ORTHO05D000397 1.3e-230 803.1 508 78.0
Cc03_g05160 Coffea canephora HOM05D006440 ORTHO05D003987 6.6e-230 800.8 507 77.1
Rhsim04G0187900 Rhododendron simsii HOM05D006440 ORTHO05D003987 3.6e-228 795.0 545 73.2
Peaxi162Scf00024g01821 Petunia axillaris HOM05D006440 ORTHO05D003987 6.2e-228 794.3 437 88.8
HanXRQChr13g0418761 Helianthus annuus HOM05D006440 ORTHO05D003987 1.5e-226 789.6 507 75.9
Ciclev10004596m.g Citrus clementina HOM05D006440 ORTHO05D003987 4.9e-225 784.6 509 75.6
GSVIVG01027730001 Vitis vinifera HOM05D006440 ORTHO05D003987 6.4e-225 784.3 509 74.9
QL06p016694 Quercus lobata HOM05D006440 ORTHO05D003987 8.4e-225 783.9 509 74.9
MSTRG.9914 Avicennia marina HOM05D006440 ORTHO05D003987 9.3e-224 780.4 501 76.2
CiPaw.02G114500 Carya illinoinensis HOM05D006440 ORTHO05D003987 3.5e-223 778.5 509 74.1
Duzib212G0326 Durio zibethinus HOM05D006440 ORTHO05D003987 3.9e-222 775.0 509 74.1
SalBow2G2218 Salvia bowleyana HOM05D006440 ORTHO05D003987 5.6e-221 771.2 525 73.0
vmacro08450 Vaccinium macrocarpon HOM05D006440 ORTHO05D003987 1.6e-220 769.6 579 68.2
Gohir.A09G225400 Gossypium hirsutum HOM05D006440 ORTHO05D003987 1.8e-219 766.1 516 73.1
Atru.chr4.2134 Acer truncatum HOM05D006440 ORTHO05D003987 5.3e-219 764.6 508 73.6
Potri.010G073600 Populus trichocarpa HOM05D006440 ORTHO05D003987 2.0e-218 762.7 508 74.0
Migut.G00449 Erythranthe guttata HOM05D006440 ORTHO05D003987 7.6e-218 760.8 511 73.2
Eucgr.H03137 Eucalyptus grandis HOM05D006440 ORTHO05D003987 1.3e-217 760.0 509 73.9
Manes.03G166900 Manihot esculenta HOM05D006440 ORTHO05D003987 1.7e-217 759.6 509 73.5
DCAR_027296 Daucus carota HOM05D006440 ORTHO05D003987 2.2e-217 759.2 509 73.7
Potri.008G165000 Populus trichocarpa HOM05D006440 ORTHO05D003987 2.9e-217 758.8 509 74.1
CsaV3_3G012320 Cucumis sativus L. HOM05D006440 ORTHO05D003987 5.4e-216 754.6 509 72.1
MELO3C006441.2 Cucumis melo HOM05D006440 ORTHO05D003987 7.1e-216 754.2 509 72.1
Prupe.1G035000 Prunus persica HOM05D006440 ORTHO05D003987 1.6e-215 753.1 510 72.5
Dinv29887 Davidia involucrata HOM05D006440 ORTHO05D003188 2.7e-215 752.3 473 79.3
Gohir.D09G227100 Gossypium hirsutum HOM05D006440 ORTHO05D003987 3.5e-215 751.9 509 72.5
Nn1g02707 Nelumbo nucifera HOM05D006440 ORTHO05D003987 3.5e-215 751.9 514 71.8
TAR365G0504 Trochodendron aralioides HOM05D006440 ORTHO05D003987 4.6e-215 751.5 509 72.1
SGA_v2.0_scaffold88G27269 Striga asiatica HOM05D006440 ORTHO05D003987 6.7e-214 747.7 510 73.1
Sed0013572 Sechium edule HOM05D006440 ORTHO05D003987 3.7e-212 741.9 504 71.8
CANSAT78G1511 Cannabis sativa HOM05D006440 ORTHO05D003987 4.8e-212 741.5 509 71.1
TWI09G0180 Tripterygium wilfordii HOM05D006440 ORTHO05D003987 4.8e-212 741.5 509 70.9
Lalb_Chr02g0150571 Lupinus albus HOM05D006440 ORTHO05D003987 1.4e-211 740.0 516 70.0
Ca_09816_v3 Cicer arietinum L. HOM05D006440 ORTHO05D003987 6.9e-211 737.6 509 70.3
COL.COLO4_15832 Corchorus olitorius HOM05D006440 ORTHO05D003987 1.2e-210 736.9 509 70.9
arahy.Tifrunner.gnm1.ann1.WJ3SQN Arachis hypogaea HOM05D006440 ORTHO05D003987 2.0e-210 736.1 505 70.7
ECA240G3037 Erigeron canadensis HOM05D006440 ORTHO05D003987 1.3e-209 733.4 493 72.8
MD13G1210600 Malus domestica HOM05D006440 ORTHO05D003987 2.2e-209 732.6 509 70.9
Lj5g0005322 Lotus japonicus HOM05D006440 ORTHO05D003987 1.9e-208 729.6 511 69.7
Medtr1g073920 Medicago truncatula HOM05D006440 ORTHO05D003987 2.5e-208 729.2 511 70.3
Sc25g0004030 Simmondsia chinensis HOM05D006440 ORTHO05D003987 5.5e-208 728.0 511 70.3
Sabra10G0034700 Salix brachista HOM05D006440 ORTHO05D003987 1.6e-207 726.5 553 67.1
Nitab4.5_0000342g0190 Nicotiana tabacum HOM05D006440 ORTHO05D003987 3.0e-206 722.2 497 75.3
VMungo0720G1034 Vigna mungo HOM05D006440 ORTHO05D003987 3.9e-206 721.8 514 69.1
Glyma.20G202700 Glycine max HOM05D006440 ORTHO05D003987 4.8e-204 714.9 510 68.6
PGR004G0512 Punica granatum HOM05D006440 ORTHO05D003987 1.1e-203 713.8 510 69.8
Phvul.007G129000 Phaseolus vulgaris HOM05D006440 ORTHO05D003987 1.8e-203 713.0 514 68.3
PSO017G7287 Papaver somniferum HOM05D006440 ORTHO05D003987 3.1e-203 712.2 505 68.1
Lsat_1_v5_gn_3_121341 Lactuca sativa HOM05D006440 ORTHO05D003987 1.5e-202 709.9 495 71.7
Aqoxy2G03617 Aquilegia oxysepala HOM05D006440 ORTHO05D003987 3.4e-202 708.8 512 67.6
Glyma.10G188100 Glycine max HOM05D006440 ORTHO05D003987 3.4e-202 708.8 509 68.0
arahy.Tifrunner.gnm1.ann1.A0C0SS Arachis hypogaea HOM05D006440 ORTHO05D003987 4.5e-202 708.4 497 70.4
PSO063G3815 Papaver somniferum HOM05D006440 ORTHO05D003987 7.6e-202 707.6 505 67.7
FAN17G2886 Fragaria x ananassa HOM05D006440 ORTHO05D003987 1.0e-201 707.2 512 68.6
MBI18_g37356_MAGBIO Magnolia biondii HOM05D006440 ORTHO05D003987 1.0e-201 707.2 556 64.9
FvH4_4g03210 Fragaria vesca HOM05D006440 ORTHO05D003987 1.9e-200 703.0 512 68.4
RcHm_v2.0_Chr4g0391871 Rosa chinensis HOM05D006440 ORTHO05D003987 4.2e-200 701.8 511 67.9
ClCG05G004420 Citrullus lanatus HOM05D006440 ORTHO05D003987 5.5e-200 701.4 548 64.1
EL10Ac3g05914 Beta vulgaris HOM05D006440 ORTHO05D003987 7.1e-200 701.0 507 67.5
Gorai.006G249000 Gossypium raimondii HOM05D006440 ORTHO05D003987 3.8e-193 678.7 476 71.6
THA.LOC104815988 Tarenaya hassleriana HOM05D006440 ORTHO05D003987 1.6e-191 673.3 503 65.4
FAN12G1575 Fragaria x ananassa HOM05D006440 ORTHO05D003987 1.1e-189 667.2 512 66.0
Hund04543 Selenicereus undatus HOM05D006440 ORTHO05D003987 1.1e-189 667.2 507 65.9
FAN22G0224 Fragaria x ananassa HOM05D006440 ORTHO05D003987 9.7e-189 664.1 512 65.6
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 9.7e-189 664.1 467 70.0
AUR62015479 Chenopodium quinoa HOM05D006440 ORTHO05D003987 1.1e-187 660.6 507 65.3
unitig_748.g7321 Utricularia gibba HOM05D006440 ORTHO05D003987 5.9e-186 654.8 530 62.6
Ah.07g207430 Amaranthus hybridus HOM05D006440 ORTHO05D003987 2.7e-183 646.0 495 66.3
Sp2g08350 Schrenkiella parvula HOM05D006440 ORTHO05D003987 3.0e-182 642.5 506 62.3
Aa31LG5G3660 Aethionema arabicum HOM05D006440 ORTHO05D003987 3.3e-181 639.0 503 62.8
Lj6A660T45 Lonicera japonica HOM05D006440 ORTHO05D003987 3.3e-181 639.0 518 65.8
Psat6g132960 Pisum sativum HOM05D006440 ORTHO05D003987 1.3e-180 637.1 509 62.7
BcaC03g16584 Brassica carinata HOM05D006440 ORTHO05D003987 2.2e-180 636.3 501 62.3
CDE06G0279 Ceratophyllum demersum HOM05D006440 ORTHO05D003987 2.2e-180 636.3 508 64.2
C02p44000 Brassica napus HOM05D006440 ORTHO05D003987 4.8e-180 635.2 509 61.5
Thhalv10003170m.g Eutrema salsugineum HOM05D006440 ORTHO05D003987 1.1e-179 634.0 508 61.2
Os04g0177600 Oryza sativa ssp. japonica HOM05D006440 ORTHO05D003987 1.8e-179 633.3 503 62.4
Actinidia04464 Actinidia chinensis HOM05D006440 ORTHO05D003987 2.4e-179 632.9 438 73.1
AL8G16820 Arabidopsis lyrata HOM05D006440 ORTHO05D003987 9.1e-179 630.9 505 62.6
BcaB07g30569 Brassica carinata HOM05D006440 ORTHO05D003987 1.5e-178 630.2 504 61.9
A02p27870 Brassica napus HOM05D006440 ORTHO05D003987 2.0e-178 629.8 505 61.2
BraA02t07826Z Brassica rapa HOM05D006440 ORTHO05D003987 2.0e-178 629.8 505 61.2
BolC2t10447H Brassica oleracea HOM05D006440 ORTHO05D003987 3.5e-178 629.0 508 61.2
AT5G43500 Arabidopsis thaliana HOM05D006440 ORTHO05D003987 2.9e-177 625.9 504 61.7
Carub.0008s0511 Capsella rubella HOM05D006440 ORTHO05D003987 2.5e-176 622.9 505 60.8
AUR62002263 Chenopodium quinoa HOM05D006440 ORTHO05D003987 1.6e-175 620.2 594 55.7
Manes.15G038500 Manihot esculenta HOM05D006440 ORTHO05D003987 2.1e-175 619.8 507 63.7
ATR0680G034 Amborella trichopoda HOM05D006440 ORTHO05D003987 7.4e-173 611.3 489 63.4
CARHR180120 Cardamine hirsuta HOM05D006440 ORTHO05D003987 3.5e-170 602.4 497 60.4
Haze_11338 Corylus avellana HOM05D006440 ORTHO05D003987 5.9e-170 601.7 571 56.2
Thecc.04G250600 Theobroma cacao HOM05D006440 ORTHO05D003987 3.2e-168 595.9 509 61.3
Psat2g067040 Pisum sativum HOM05D006440 ORTHO05D003987 7.8e-146 521.5 382 67.5
Mapoly0028s0034 Marchantia polymorpha HOM05D006440 ORTHO05D003987 1.2e-125 454.5 482 49.8
PGSC0003DMG400017256 Solanum tuberosum HOM05D006440 ORTHO05D003987 2.3e-121 440.3 227 92.5
Pp3c3_14850 Physcomitrium patens HOM05D006440 ORTHO05D003987 1.1e-112 411.4 481 46.2
HPP92_008424 Vanilla planifolia HOM05D006440 ORTHO05D003987 1.2e-109 401.4 316 63.6
SMO117G0008 Selaginella moellendorffii HOM05D006440 ORTHO05D003987 3.9e-105 386.3 410 47.8
MD16G1213700 Malus domestica HOM05D006440 ORTHO05D003987 7.9e-90 335.5 449 44.5
Cpa.g.sc44.85 Carica papaya HOM05D006440 ORTHO05D003987 1.8e-81 307.8 205 73.2
Zm00001eb087460 Zea mays HOM05D006440 ORTHO05D003987 4.8e-79 299.7 239 60.3
CBR_g37544 Chara braunii HOM05D000019 ORTHO05D000002 4.5e-69 266.5 356 43.3
HPP92_027995 Vanilla planifolia HOM05D006440 ORTHO05D003987 3.3e-56 223.8 167 62.9
Zm00001eb087470 Zea mays HOM05D006440 ORTHO05D003987 1.6e-50 204.9 221 53.4
HanXRQChr13g0422471 Helianthus annuus HOM05D006440 ORTHO05D003987 1.1e-35 155.6 132 62.1
SEGI_34555 Sequoiadendron giganteum HOM05D006440 ORTHO05D003987 4.3e-35 153.7 110 62.7
HanXRQChr13g0422461 Helianthus annuus HOM05D006440 ORTHO05D003987 2.0e-29 134.8 73 83.6
Hma1.2p1_1716F.1_g299120 Hydrangea macrophylla HOM05D006440 ORTHO05D003987 3.9e-28 130.6 65 87.7
SHI00689 Sapria himalayana HOM05D006440 ORTHO05D003987 4.0e-17 94.0 59 83.1
Cfa026271 Carpinus fangiana HOM05D006440 ORTHO05D003987 2.1e-13 81.6 273 25.6
SHI00691 Sapria himalayana HOM05D000023 ORTHO05D000014 6.2e-10 70.1 64 57.8
MD16G1213300 Malus domestica HOM05D006440 ORTHO05D003987 1.4e-09 68.9 45 64.4
HPP92_008423 Vanilla planifolia HOM05D006440 ORTHO05D003987 1.4e-09 68.9 48 62.5
Haze_11337 Corylus avellana HOM05D006440 ORTHO05D003987 1.5e-08 65.5 32 93.8
Nn5g28601 Nelumbo nucifera HOM05D006440 ORTHO05D003987 1.1e-06 59.3 54 51.9
SHI00693 Sapria himalayana HOM05D006440 ORTHO05D003987 9.2e-06 56.2 41 65.9


User provided reference genes

Program Settings